RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-215ENST00000522115 EPB42P16452 691 aa8.28□□□□□ -1.08
PTPN12-215ENST00000522115 BRD2P25440 801 aaKnown RBP8.28□□□□□ -1.08
PTPN12-215ENST00000522115 ADH6P28332 368 aa8.28□□□□□ -1.08
PTPN12-215ENST00000522115 IDH3AP50213 366 aa8.27□□□□□ -1.09
PTPN12-215ENST00000522115 ARSDP51689 593 aa8.27□□□□□ -1.09
PTPN12-215ENST00000522115 SVOPQ8N4V2 548 aa8.27□□□□□ -1.09
PTPN12-215ENST00000522115 HELQQ8TDG4 1101 aa8.27□□□□□ -1.09
PTPN12-215ENST00000522115 SEPT3Q9UH03 358 aa8.27□□□□□ -1.09
PTPN12-215ENST00000522115 CARNS1A5YM72 827 aa8.26□□□□□ -1.09
PTPN12-215ENST00000522115 OPLAHO14841 1288 aa8.26□□□□□ -1.09
PTPN12-215ENST00000522115 MAP3K10Q02779 954 aa8.26□□□□□ -1.09
PTPN12-215ENST00000522115 SPEM2Q0P670 501 aa8.26□□□□□ -1.09
PTPN12-215ENST00000522115 ETFBKMTQ8IXQ9 262 aa8.26□□□□□ -1.09
PTPN12-215ENST00000522115 MDFIQ99750 246 aa8.26□□□□□ -1.09
PTPN12-215ENST00000522115 STIM2Q9P246 746 aa8.26□□□□□ -1.09
PTPN12-215ENST00000522115 MTMR7Q9Y216 660 aa8.26□□□□□ -1.09
PTPN12-215ENST00000522115 SIN3BO75182 1162 aa8.25□□□□□ -1.09
PTPN12-215ENST00000522115 GRNP28799 593 aaKnown RBP8.25□□□□□ -1.09
PTPN12-215ENST00000522115 NEUROD1Q13562 356 aa8.25□□□□□ -1.09
PTPN12-215ENST00000522115 NAA30Q147X3 362 aaPredicted RBP8.25□□□□□ -1.09
PTPN12-215ENST00000522115 TREML1Q86YW5 311 aa8.25□□□□□ -1.09
PTPN12-215ENST00000522115 ABTB2Q8N961 1025 aa8.25□□□□□ -1.09
PTPN12-215ENST00000522115 SLC30A3Q99726 388 aa8.25□□□□□ -1.09
PTPN12-215ENST00000522115 ENAMQ9NRM1 1142 aa8.25□□□□□ -1.09
PTPN12-215ENST00000522115 KLF15Q9UIH9 416 aa8.25□□□□□ -1.09
PTPN12-215ENST00000522115 GGA1Q9UJY5 639 aa8.25□□□□□ -1.09
PTPN12-215ENST00000522115 PRR12Q9ULL5 1215 aa8.25□□□□□ -1.09
PTPN12-215ENST00000522115 GRIN2CQ14957 1233 aa8.24□□□□□ -1.09
PTPN12-215ENST00000522115 ADARB2-AS1A8MUL3 147 aa8.23□□□□□ -1.09
PTPN12-215ENST00000522115 EGFRP00533 1210 aa8.23□□□□□ -1.09
PTPN12-215ENST00000522115 EPXP11678 715 aa8.23□□□□□ -1.09
PTPN12-215ENST00000522115 NPR3P17342 541 aa8.23□□□□□ -1.09
PTPN12-215ENST00000522115 FAM26DQ5JW98 314 aa8.23□□□□□ -1.09
PTPN12-215ENST00000522115 C1orf229Q6ZS94 237 aaPredicted RBP8.23□□□□□ -1.09
PTPN12-215ENST00000522115 GSX2Q9BZM3 304 aa8.23□□□□□ -1.09
PTPN12-215ENST00000522115 ARID4AP29374 1257 aaPredicted RBP8.22□□□□□ -1.09
PTPN12-215ENST00000522115 SCNN1AP37088 669 aa8.22□□□□□ -1.09
PTPN12-215ENST00000522115 SYT9Q86SS6 491 aa8.22□□□□□ -1.09
PTPN12-215ENST00000522115 FCHSD1Q86WN1 690 aa8.22□□□□□ -1.09
PTPN12-215ENST00000522115 GTF3C2Q8WUA4 911 aaPredicted RBP8.22□□□□□ -1.09
PTPN12-215ENST00000522115 TNFRSF25Q93038 417 aa8.22□□□□□ -1.09
PTPN12-215ENST00000522115 FAM13BQ9NYF5 915 aa8.22□□□□□ -1.09
PTPN12-215ENST00000522115 EGFL7Q9UHF1 273 aa8.22□□□□□ -1.09
PTPN12-215ENST00000522115 RTCBQ9Y3I0 505 aaKnown RBP8.22□□□□□ -1.09
PTPN12-215ENST00000522115 NEURL1BA8MQ27 555 aa8.21□□□□□ -1.1
PTPN12-215ENST00000522115 MAP3K6O95382 1288 aa8.21□□□□□ -1.1
PTPN12-215ENST00000522115 PCBP4P57723 403 aaKnown RBP8.21□□□□□ -1.1
PTPN12-215ENST00000522115 SF3B2Q13435 895 aaKnown RBP8.21□□□□□ -1.1
PTPN12-215ENST00000522115 CCINQ13939 588 aa8.21□□□□□ -1.1
PTPN12-215ENST00000522115 GALNT6Q8NCL4 622 aa8.21□□□□□ -1.1
PTPN12-215ENST00000522115 EDARADDQ8WWZ3 215 aa8.21□□□□□ -1.1
PTPN12-215ENST00000522115 ADAMTS8Q9UP79 889 aa8.21□□□□□ -1.1
PTPN12-215ENST00000522115 DNMT3AQ9Y6K1 912 aaPredicted RBP8.21□□□□□ -1.1
PTPN12-215ENST00000522115 SHISA8B8ZZ34 492 aa8.2□□□□□ -1.1
PTPN12-215ENST00000522115 ELOA3CA0A087WX78 387 aaPredicted RBP8.19□□□□□ -1.1
PTPN12-215ENST00000522115 ELOA3DA6NLF2 546 aaPredicted RBP8.19□□□□□ -1.1
PTPN12-215ENST00000522115 BRD1O95696 1058 aa8.19□□□□□ -1.1
PTPN12-215ENST00000522115 ZAP70P43403 619 aa8.19□□□□□ -1.1
PTPN12-215ENST00000522115 ELOA3BQ3SY89 546 aa8.19□□□□□ -1.1
PTPN12-215ENST00000522115 TXNDC2Q86VQ3 553 aa8.19□□□□□ -1.1
PTPN12-215ENST00000522115 ELOA3Q8NG57 546 aa8.19□□□□□ -1.1
PTPN12-215ENST00000522115 KCNMB2Q9Y691 235 aa8.19□□□□□ -1.1
PTPN12-215ENST00000522115 ZBTB39O15060 712 aa8.18□□□□□ -1.1
PTPN12-215ENST00000522115 RGL4Q8IZJ4 473 aa8.18□□□□□ -1.1
PTPN12-215ENST00000522115 PIK3R5Q8WYR1 880 aa8.18□□□□□ -1.1
PTPN12-215ENST00000522115 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.18□□□□□ -1.1
PTPN12-215ENST00000522115 FAM13AO94988 1023 aa8.17□□□□□ -1.1
PTPN12-215ENST00000522115 FKBP4Q02790 459 aaKnown RBP eCLIP8.17□□□□□ -1.1
PTPN12-215ENST00000522115 ALKBH2Q6NS38 261 aa8.17□□□□□ -1.1
PTPN12-215ENST00000522115 BHMTQ93088 406 aa8.17□□□□□ -1.1
PTPN12-215ENST00000522115 BTBD6Q96KE9 485 aa8.17□□□□□ -1.1
PTPN12-215ENST00000522115 XYLBO75191 536 aa8.16□□□□□ -1.1
PTPN12-215ENST00000522115 HOXB4P17483 251 aaPredicted RBP8.16□□□□□ -1.1
PTPN12-215ENST00000522115 TRIP4Q15650 581 aaPredicted RBP8.16□□□□□ -1.1
PTPN12-215ENST00000522115 NOM1Q5C9Z4 860 aaKnown RBP8.16□□□□□ -1.1
PTPN12-215ENST00000522115 KANK3Q6NY19 840 aa8.16□□□□□ -1.1
PTPN12-215ENST00000522115 RAB44Q7Z6P3 723 aaPredicted RBP8.16□□□□□ -1.1
PTPN12-215ENST00000522115 NEDD1Q8NHV4 660 aa8.16□□□□□ -1.1
PTPN12-215ENST00000522115 PNMA5Q96PV4 448 aa8.16□□□□□ -1.1
PTPN12-215ENST00000522115 TRAIPQ9BWF2 469 aa8.16□□□□□ -1.1
PTPN12-215ENST00000522115 GNEQ9Y223 722 aaKnown RBP8.16□□□□□ -1.1
PTPN12-215ENST00000522115 ICMTO60725 284 aa8.15□□□□□ -1.1
PTPN12-215ENST00000522115 RPLP1P05386 114 aaKnown RBP8.15□□□□□ -1.1
PTPN12-215ENST00000522115 HOXD8P13378 290 aaPredicted RBP8.15□□□□□ -1.1
PTPN12-215ENST00000522115 NFKB1P19838 968 aa8.15□□□□□ -1.1
PTPN12-215ENST00000522115 MPSTP25325 297 aa8.15□□□□□ -1.1
PTPN12-215ENST00000522115 ADH7P40394 386 aa8.15□□□□□ -1.1
PTPN12-215ENST00000522115 EIF1AXP47813 144 aaKnown RBP8.15□□□□□ -1.1
PTPN12-215ENST00000522115 PCSK7Q16549 785 aa8.15□□□□□ -1.1
PTPN12-215ENST00000522115 CMTR1Q8N1G2 835 aaKnown RBP8.15□□□□□ -1.1
PTPN12-215ENST00000522115 SCARF2Q96GP6 870 aaPredicted RBP8.15□□□□□ -1.1
PTPN12-215ENST00000522115 ZFATQ9P243 1243 aa8.15□□□□□ -1.1
PTPN12-215ENST00000522115 RNF225M0QZC1 329 aaPredicted RBP8.14□□□□□ -1.11
PTPN12-215ENST00000522115 ALAS2P22557 587 aa8.14□□□□□ -1.11
PTPN12-215ENST00000522115 MZF1P28698 734 aaPredicted RBP8.14□□□□□ -1.11
PTPN12-215ENST00000522115 DGKGP49619 791 aa8.14□□□□□ -1.11
PTPN12-215ENST00000522115 MARSP56192 900 aaKnown RBP8.14□□□□□ -1.11
PTPN12-215ENST00000522115 MTMR3Q13615 1198 aa8.14□□□□□ -1.11
PTPN12-215ENST00000522115 CHSY3Q70JA7 882 aa8.14□□□□□ -1.11
PTPN12-215ENST00000522115 CCER1Q8TC90 406 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms