RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 VCANP13611 3396 aa7.39□□□□□ -1.23
SDC2-206ENST00000521590 ANKRD31Q8N7Z5 1873 aa7.38□□□□□ -1.23
SDC2-206ENST00000521590 POLRMTO00411 1230 aaKnown RBP7.38□□□□□ -1.23
SDC2-206ENST00000521590 PTPREP23469 700 aa7.38□□□□□ -1.23
SDC2-206ENST00000521590 TM4SF1P30408 202 aa7.38□□□□□ -1.23
SDC2-206ENST00000521590 RFC4P35249 363 aa7.38□□□□□ -1.23
SDC2-206ENST00000521590 ATP6V1AP38606 617 aa7.38□□□□□ -1.23
SDC2-206ENST00000521590 CIAPIN1Q6FI81 312 aa7.38□□□□□ -1.23
SDC2-206ENST00000521590 LTV1Q96GA3 475 aaPredicted RBP7.38□□□□□ -1.23
SDC2-206ENST00000521590 SLX4Q8IY92 1834 aa7.37□□□□□ -1.23
SDC2-206ENST00000521590 CYP27B1O15528 508 aa7.37□□□□□ -1.23
SDC2-206ENST00000521590 RPS6KA4O75676 772 aa7.37□□□□□ -1.23
SDC2-206ENST00000521590 EPHX2P34913 555 aa7.37□□□□□ -1.23
SDC2-206ENST00000521590 SLC4A9Q96Q91 983 aa7.37□□□□□ -1.23
SDC2-206ENST00000521590 ZIC5Q96T25 663 aa7.37□□□□□ -1.23
SDC2-206ENST00000521590 ADAM33Q9BZ11 813 aa7.37□□□□□ -1.23
SDC2-206ENST00000521590 ASAP1Q9ULH1 1129 aa7.37□□□□□ -1.23
SDC2-206ENST00000521590 HPS5Q9UPZ3 1129 aa7.37□□□□□ -1.23
SDC2-206ENST00000521590 KDM2AQ9Y2K7 1162 aa7.37□□□□□ -1.23
SDC2-206ENST00000521590 RBBP6Q7Z6E9 1792 aaKnown RBP7.37□□□□□ -1.23
SDC2-206ENST00000521590 CD163L1Q9NR16 1453 aa7.36□□□□□ -1.23
SDC2-206ENST00000521590 ARFGEF2Q9Y6D5 1785 aa7.36□□□□□ -1.23
SDC2-206ENST00000521590 INSRP06213 1382 aa7.36□□□□□ -1.23
SDC2-206ENST00000521590 COL11A2P13942 1736 aaPredicted RBP7.36□□□□□ -1.23
SDC2-206ENST00000521590 CGNL1Q0VF96 1302 aa7.36□□□□□ -1.23
SDC2-206ENST00000521590 LTBP3Q9NS15 1303 aa7.36□□□□□ -1.23
SDC2-206ENST00000521590 TRIOBPQ9H2D6 2365 aa7.36□□□□□ -1.23
SDC2-206ENST00000521590 RC3H1Q5TC82 1133 aaKnown RBP7.36□□□□□ -1.23
SDC2-206ENST00000521590 PNMA8AQ86V59 439 aaPredicted RBP7.36□□□□□ -1.23
SDC2-206ENST00000521590 DCAF11Q8TEB1 546 aa7.36□□□□□ -1.23
SDC2-206ENST00000521590 WNT2BQ93097 391 aa7.36□□□□□ -1.23
SDC2-206ENST00000521590 SRP68Q9UHB9 627 aaKnown RBP7.36□□□□□ -1.23
SDC2-206ENST00000521590 HACL1Q9UJ83 578 aa7.36□□□□□ -1.23
SDC2-206ENST00000521590 PAPPA2Q9BXP8 1791 aa7.36□□□□□ -1.23
SDC2-206ENST00000521590 KDRP35968 1356 aa7.35□□□□□ -1.23
SDC2-206ENST00000521590 EVI5O60447 810 aa7.35□□□□□ -1.23
SDC2-206ENST00000521590 NBPF6Q5VWK0 638 aa7.35□□□□□ -1.23
SDC2-206ENST00000521590 SAPCD2Q86UD0 394 aa7.35□□□□□ -1.23
SDC2-206ENST00000521590 MRPL50Q8N5N7 158 aaKnown RBP7.35□□□□□ -1.23
SDC2-206ENST00000521590 NBPF4Q96M43 638 aa7.35□□□□□ -1.23
SDC2-206ENST00000521590 SMG6Q86US8 1419 aaKnown RBP7.35□□□□□ -1.23
SDC2-206ENST00000521590 SPTBN5Q9NRC6 3674 aaKnown RBP7.34□□□□□ -1.23
SDC2-206ENST00000521590 KTN1Q86UP2 1357 aaKnown RBP7.34□□□□□ -1.23
SDC2-206ENST00000521590 MAP3K19Q56UN5 1328 aa7.34□□□□□ -1.23
SDC2-206ENST00000521590 PCDH11XQ9BZA7 1347 aa7.34□□□□□ -1.23
SDC2-206ENST00000521590 PCDH11YQ9BZA8 1340 aa7.34□□□□□ -1.23
SDC2-206ENST00000521590 TRAF5O00463 557 aa7.34□□□□□ -1.23
SDC2-206ENST00000521590 C21orf2O43822 256 aa7.34□□□□□ -1.23
SDC2-206ENST00000521590 RGS20O76081 388 aa7.34□□□□□ -1.23
SDC2-206ENST00000521590 CTU1Q7Z7A3 348 aaKnown RBP7.34□□□□□ -1.23
SDC2-206ENST00000521590 NME9Q86XW9 330 aa7.34□□□□□ -1.23
SDC2-206ENST00000521590 ZDHHC16Q969W1 377 aa7.34□□□□□ -1.23
SDC2-206ENST00000521590 HHIPL1Q96JK4 782 aa7.34□□□□□ -1.23
SDC2-206ENST00000521590 ATG3Q9NT62 314 aa7.34□□□□□ -1.23
SDC2-206ENST00000521590 CNTNAP4Q9C0A0 1308 aa7.33□□□□□ -1.24
SDC2-206ENST00000521590 ZNF541Q9H0D2 1346 aa7.33□□□□□ -1.24
SDC2-206ENST00000521590 USP42Q9H9J4 1324 aaKnown RBP7.33□□□□□ -1.24
SDC2-206ENST00000521590 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.33□□□□□ -1.24
SDC2-206ENST00000521590 USHBP1Q8N6Y0 703 aa7.33□□□□□ -1.24
SDC2-206ENST00000521590 RNF123Q5XPI4 1314 aa7.32□□□□□ -1.24
SDC2-206ENST00000521590 CENPJQ9HC77 1338 aaPredicted RBP7.32□□□□□ -1.24
SDC2-206ENST00000521590 LAMA3Q16787 3333 aa7.32□□□□□ -1.24
SDC2-206ENST00000521590 GOLGA8CPA6NN73 597 aa7.32□□□□□ -1.24
SDC2-206ENST00000521590 HOXC9P31274 260 aa7.32□□□□□ -1.24
SDC2-206ENST00000521590 C2CD5Q86YS7 1000 aa7.32□□□□□ -1.24
SDC2-206ENST00000521590 MPNDQ8N594 471 aa7.32□□□□□ -1.24
SDC2-206ENST00000521590 COL25A1Q9BXS0 654 aaPredicted RBP7.32□□□□□ -1.24
SDC2-206ENST00000521590 IRX2Q9BZI1 471 aaPredicted RBP7.32□□□□□ -1.24
SDC2-206ENST00000521590 TAOK3Q9H2K8 898 aa7.32□□□□□ -1.24
SDC2-206ENST00000521590 SAGE1Q9NXZ1 904 aa7.32□□□□□ -1.24
SDC2-206ENST00000521590 CARMIL3Q8ND23 1372 aa7.32□□□□□ -1.24
SDC2-206ENST00000521590 SBNO2Q9Y2G9 1366 aa7.32□□□□□ -1.24
SDC2-206ENST00000521590 H0YIN7 160 aa7.31□□□□□ -1.24
SDC2-206ENST00000521590 TJP1Q07157 1748 aa7.31□□□□□ -1.24
SDC2-206ENST00000521590 PROX2Q3B8N5 592 aa7.31□□□□□ -1.24
SDC2-206ENST00000521590 RAPGEF4Q8WZA2 1011 aa7.31□□□□□ -1.24
SDC2-206ENST00000521590 LAMB4A4D0S4 1761 aa7.31□□□□□ -1.24
SDC2-206ENST00000521590 BCORQ6W2J9 1755 aa7.31□□□□□ -1.24
SDC2-206ENST00000521590 CEP290O15078 2479 aa7.3□□□□□ -1.24
SDC2-206ENST00000521590 EYSQ5T1H1 3165 aa7.3□□□□□ -1.24
SDC2-206ENST00000521590 TRPA1O75762 1119 aa7.3□□□□□ -1.24
SDC2-206ENST00000521590 TATP17735 454 aaPredicted RBP7.3□□□□□ -1.24
SDC2-206ENST00000521590 COL9A1P20849 921 aa7.3□□□□□ -1.24
SDC2-206ENST00000521590 PDE4AP27815 886 aa7.3□□□□□ -1.24
SDC2-206ENST00000521590 NOGQ13253 232 aa7.3□□□□□ -1.24
SDC2-206ENST00000521590 RNF186Q9NXI6 227 aa7.3□□□□□ -1.24
SDC2-206ENST00000521590 FAM155AB1AL88 458 aaPredicted RBP7.29□□□□□ -1.24
SDC2-206ENST00000521590 FBLN1P23142 703 aa7.29□□□□□ -1.24
SDC2-206ENST00000521590 NFIXQ14938 502 aa7.29□□□□□ -1.24
SDC2-206ENST00000521590 PKN2Q16513 984 aaKnown RBP7.29□□□□□ -1.24
SDC2-206ENST00000521590 AKAP4Q5JQC9 854 aa7.29□□□□□ -1.24
SDC2-206ENST00000521590 LARP6Q9BRS8 491 aaKnown RBP7.29□□□□□ -1.24
SDC2-206ENST00000521590 NBPF3Q9H094 633 aa7.29□□□□□ -1.24
SDC2-206ENST00000521590 EMILIN3Q9NT22 766 aa7.29□□□□□ -1.24
SDC2-206ENST00000521590 TMOD3Q9NYL9 352 aa7.29□□□□□ -1.24
SDC2-206ENST00000521590 PCDHGA10Q9Y5H3 936 aa7.29□□□□□ -1.24
SDC2-206ENST00000521590 MUC3AQ02505 3323 aa7.29□□□□□ -1.24
SDC2-206ENST00000521590 PPP1R3GB7ZBB8 358 aa7.28□□□□□ -1.24
SDC2-206ENST00000521590 FZD9O00144 591 aa7.28□□□□□ -1.24
SDC2-206ENST00000521590 GTPBP6O43824 516 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms