RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 PPP1R42Q7Z4L9 355 aa19.87■□□□□ 0.77
CSMD1-207ENST00000520451 NECTIN2Q92692 538 aa19.87■□□□□ 0.77
CSMD1-207ENST00000520451 L3MBTL3Q96JM7 780 aaPredicted RBP19.87■□□□□ 0.77
CSMD1-207ENST00000520451 POTEIP0CG38 1075 aa19.86■□□□□ 0.77
CSMD1-207ENST00000520451 POTEJP0CG39 1038 aa19.86■□□□□ 0.77
CSMD1-207ENST00000520451 HOXA10P31260 410 aaPredicted RBP19.86■□□□□ 0.77
CSMD1-207ENST00000520451 RUNDC1Q96C34 613 aa19.86■□□□□ 0.77
CSMD1-207ENST00000520451 RBM17Q96I25 401 aaKnown RBP19.86■□□□□ 0.77
CSMD1-207ENST00000520451 PCNTO95613 3336 aa19.86■□□□□ 0.77
CSMD1-207ENST00000520451 CC2D2BQ6DHV5 1058 aa19.85■□□□□ 0.77
CSMD1-207ENST00000520451 PSMD1Q99460 953 aa19.85■□□□□ 0.77
CSMD1-207ENST00000520451 LAS1LQ9Y4W2 734 aaKnown RBP19.85■□□□□ 0.77
CSMD1-207ENST00000520451 SNED1Q8TER0 1413 aa19.85■□□□□ 0.77
CSMD1-207ENST00000520451 AIMP1Q12904 312 aaKnown RBP19.84■□□□□ 0.77
CSMD1-207ENST00000520451 C3orf67Q6ZVT6 689 aa19.84■□□□□ 0.77
CSMD1-207ENST00000520451 UTP14AQ9BVJ6 771 aaKnown RBP19.84■□□□□ 0.77
CSMD1-207ENST00000520451 TAF1DQ9H5J8 278 aaPredicted RBP19.84■□□□□ 0.77
CSMD1-207ENST00000520451 CHL1O00533 1208 aa19.83■□□□□ 0.77
CSMD1-207ENST00000520451 PPEF1O14829 653 aaPredicted RBP19.83■□□□□ 0.77
CSMD1-207ENST00000520451 KRT24Q2M2I5 525 aa19.83■□□□□ 0.77
CSMD1-207ENST00000520451 COPS6Q7L5N1 327 aa19.83■□□□□ 0.77
CSMD1-207ENST00000520451 XAGE3Q8WTP9 111 aa19.83■□□□□ 0.77
CSMD1-207ENST00000520451 CRAMP1Q96RY5 1269 aa19.83■□□□□ 0.77
CSMD1-207ENST00000520451 TRIM35Q9UPQ4 493 aa19.83■□□□□ 0.77
CSMD1-207ENST00000520451 FZD9O00144 591 aa19.82■□□□□ 0.76
CSMD1-207ENST00000520451 TCERG1O14776 1098 aaKnown RBP19.82■□□□□ 0.76
CSMD1-207ENST00000520451 LDHDQ86WU2 507 aa19.82■□□□□ 0.76
CSMD1-207ENST00000520451 JDP2Q8WYK2 163 aa19.82■□□□□ 0.76
CSMD1-207ENST00000520451 NLRP3Q96P20 1036 aa19.82■□□□□ 0.76
CSMD1-207ENST00000520451 ADAMTS8Q9UP79 889 aa19.82■□□□□ 0.76
CSMD1-207ENST00000520451 SCN4AP35499 1836 aa19.81■□□□□ 0.76
CSMD1-207ENST00000520451 GRIPAP1Q4V328 841 aa19.81■□□□□ 0.76
CSMD1-207ENST00000520451 HSP90AB3PQ58FF7 597 aa19.81■□□□□ 0.76
CSMD1-207ENST00000520451 SLC51AQ86UW1 340 aa19.81■□□□□ 0.76
CSMD1-207ENST00000520451 DDX21Q9NR30 783 aaKnown RBP eCLIP19.81■□□□□ 0.76
CSMD1-207ENST00000520451 HACL1Q9UJ83 578 aa19.81■□□□□ 0.76
CSMD1-207ENST00000520451 EAPPQ56P03 285 aaPredicted RBP19.8■□□□□ 0.76
CSMD1-207ENST00000520451 SLC10A5Q5PT55 438 aa19.8■□□□□ 0.76
CSMD1-207ENST00000520451 RNF123Q5XPI4 1314 aa19.79■□□□□ 0.76
CSMD1-207ENST00000520451 NLRP10Q86W26 655 aa19.79■□□□□ 0.76
CSMD1-207ENST00000520451 GPC2Q8N158 579 aa19.79■□□□□ 0.76
CSMD1-207ENST00000520451 CREBZFQ9NS37 354 aa19.79■□□□□ 0.76
CSMD1-207ENST00000520451 CHPF2Q9P2E5 772 aa19.79■□□□□ 0.76
CSMD1-207ENST00000520451 EPHX2P34913 555 aa19.78■□□□□ 0.76
CSMD1-207ENST00000520451 EIF6P56537 245 aaKnown RBP19.78■□□□□ 0.76
CSMD1-207ENST00000520451 HDGFL1Q5TGJ6 251 aa19.78■□□□□ 0.76
CSMD1-207ENST00000520451 LARGE2Q8N3Y3 721 aa19.78■□□□□ 0.76
CSMD1-207ENST00000520451 TMX4Q9H1E5 349 aaPredicted RBP19.78■□□□□ 0.76
CSMD1-207ENST00000520451 PRKRIP1Q9H875 184 aaPredicted RBP19.78■□□□□ 0.76
CSMD1-207ENST00000520451 COL4A5P29400 1685 aa19.78■□□□□ 0.76
CSMD1-207ENST00000520451 ABCC4O15439 1325 aa19.77■□□□□ 0.76
CSMD1-207ENST00000520451 HCLS1P14317 486 aaPredicted RBP19.77■□□□□ 0.76
CSMD1-207ENST00000520451 TCIRG1Q13488 830 aa19.77■□□□□ 0.76
CSMD1-207ENST00000520451 TRMT112Q9UI30 125 aaKnown RBP19.77■□□□□ 0.76
CSMD1-207ENST00000520451 CLEC11AQ9Y240 323 aa19.77■□□□□ 0.76
CSMD1-207ENST00000520451 GJA3Q9Y6H8 435 aa19.77■□□□□ 0.76
CSMD1-207ENST00000520451 ANKRD36CQ5JPF3 1778 aa19.77■□□□□ 0.76
CSMD1-207ENST00000520451 PASKQ96RG2 1323 aa19.76■□□□□ 0.75
CSMD1-207ENST00000520451 HOXB7P09629 217 aa19.76■□□□□ 0.75
CSMD1-207ENST00000520451 PNMA8AQ86V59 439 aaPredicted RBP19.76■□□□□ 0.75
CSMD1-207ENST00000520451 ATP6V0A2Q9Y487 856 aa19.76■□□□□ 0.75
CSMD1-207ENST00000520451 NIM1KQ8IY84 436 aa19.75■□□□□ 0.75
CSMD1-207ENST00000520451 CFAP44Q96MT7 982 aa19.75■□□□□ 0.75
CSMD1-207ENST00000520451 MKRN1Q9UHC7 482 aaKnown RBP19.75■□□□□ 0.75
CSMD1-207ENST00000520451 SH3TC1Q8TE82 1336 aa19.75■□□□□ 0.75
CSMD1-207ENST00000520451 PPIP5K2O43314 1243 aa19.74■□□□□ 0.75
CSMD1-207ENST00000520451 HSPA1AP0DMV8 641 aaKnown RBP19.74■□□□□ 0.75
CSMD1-207ENST00000520451 HSPA1BP0DMV9 641 aaKnown RBP19.74■□□□□ 0.75
CSMD1-207ENST00000520451 ZNF428Q96B54 188 aa19.74■□□□□ 0.75
CSMD1-207ENST00000520451 DBF4Q9UBU7 674 aaPredicted RBP19.74■□□□□ 0.75
CSMD1-207ENST00000520451 BBOX1O75936 387 aa19.73■□□□□ 0.75
CSMD1-207ENST00000520451 ITGBL1O95965 494 aaPredicted RBP19.73■□□□□ 0.75
CSMD1-207ENST00000520451 LMOD1P29536 600 aaPredicted RBP19.73■□□□□ 0.75
CSMD1-207ENST00000520451 AOC3Q16853 763 aa19.73■□□□□ 0.75
CSMD1-207ENST00000520451 COL13A1Q5TAT6 717 aaPredicted RBP19.73■□□□□ 0.75
CSMD1-207ENST00000520451 DUSP27Q5VZP5 1158 aa19.73■□□□□ 0.75
CSMD1-207ENST00000520451 DDX46Q7L014 1031 aaKnown RBP19.73■□□□□ 0.75
CSMD1-207ENST00000520451 PLBD2Q8NHP8 589 aa19.73■□□□□ 0.75
CSMD1-207ENST00000520451 MBIPQ9NS73 344 aa19.73■□□□□ 0.75
CSMD1-207ENST00000520451 ADAMTSL1Q8N6G6 1762 aa19.72■□□□□ 0.75
CSMD1-207ENST00000520451 ANKRD13DQ6ZTN6 518 aa19.72■□□□□ 0.75
CSMD1-207ENST00000520451 LAMB2P55268 1798 aa19.72■□□□□ 0.75
CSMD1-207ENST00000520451 APAF1O14727 1248 aa19.71■□□□□ 0.75
CSMD1-207ENST00000520451 MAP1SQ66K74 1059 aaPredicted RBP19.71■□□□□ 0.75
CSMD1-207ENST00000520451 DPP8Q6V1X1 898 aaPredicted RBP19.71■□□□□ 0.75
CSMD1-207ENST00000520451 SUPT20HQ8NEM7 779 aa19.71■□□□□ 0.75
CSMD1-207ENST00000520451 HYPKQ9NX55 129 aa19.71■□□□□ 0.75
CSMD1-207ENST00000520451 CNTNAP1P78357 1384 aa19.7■□□□□ 0.74
CSMD1-207ENST00000520451 TMEM88BA6NKF7 163 aa19.7■□□□□ 0.74
CSMD1-207ENST00000520451 SCNN1DP51172 638 aa19.7■□□□□ 0.74
CSMD1-207ENST00000520451 GRAPQ13588 217 aa19.7■□□□□ 0.74
CSMD1-207ENST00000520451 SP8Q8IXZ3 490 aa19.7■□□□□ 0.74
CSMD1-207ENST00000520451 CNTROBQ8N137 903 aa19.7■□□□□ 0.74
CSMD1-207ENST00000520451 GRAPLQ8TC17 118 aaPredicted RBP19.7■□□□□ 0.74
CSMD1-207ENST00000520451 RTFDC1Q9BY42 306 aaPredicted RBP19.7■□□□□ 0.74
CSMD1-207ENST00000520451 VPS33BQ9H267 617 aa19.7■□□□□ 0.74
CSMD1-207ENST00000520451 LTBP1Q14766 1721 aa19.69■□□□□ 0.74
CSMD1-207ENST00000520451 ATP5J2-PTCD1G3V325 749 aa19.69■□□□□ 0.74
CSMD1-207ENST00000520451 ZNF853P0CG23 659 aa19.69■□□□□ 0.74
CSMD1-207ENST00000520451 EPS15P42566 896 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms