RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 SUSD4Q5VX71 490 aa22.46■■□□□ 1.19
SDC2-205ENST00000520233 MSL1Q68DK7 614 aa22.46■■□□□ 1.19
SDC2-205ENST00000520233 PPP1R42Q7Z4L9 355 aa22.46■■□□□ 1.19
SDC2-205ENST00000520233 CARMIL3Q8ND23 1372 aa22.46■■□□□ 1.19
SDC2-205ENST00000520233 UTP14AQ9BVJ6 771 aaKnown RBP22.45■■□□□ 1.18
SDC2-205ENST00000520233 MTFR1LQ9H019 292 aa22.45■■□□□ 1.18
SDC2-205ENST00000520233 DDX19BQ9UMR2 479 aa22.45■■□□□ 1.18
SDC2-205ENST00000520233 GRM8O00222 908 aa22.44■■□□□ 1.18
SDC2-205ENST00000520233 POLRMTO00411 1230 aaKnown RBP22.44■■□□□ 1.18
SDC2-205ENST00000520233 COL24A1Q17RW2 1714 aa22.44■■□□□ 1.18
SDC2-205ENST00000520233 USP44Q9H0E7 712 aa22.44■■□□□ 1.18
SDC2-205ENST00000520233 C9orf78Q9NZ63 289 aaPredicted RBP22.44■■□□□ 1.18
SDC2-205ENST00000520233 AFDNP55196 1824 aaKnown RBP22.43■■□□□ 1.18
SDC2-205ENST00000520233 UTYO14607 1347 aa22.43■■□□□ 1.18
SDC2-205ENST00000520233 H7C1W4 665 aa22.43■■□□□ 1.18
SDC2-205ENST00000520233 NTSR2O95665 410 aa22.43■■□□□ 1.18
SDC2-205ENST00000520233 PCCAP05165 728 aaPredicted RBP22.43■■□□□ 1.18
SDC2-205ENST00000520233 MMP10P09238 476 aa22.43■■□□□ 1.18
SDC2-205ENST00000520233 DDR1Q08345 913 aa22.43■■□□□ 1.18
SDC2-205ENST00000520233 ZBTB38Q8NAP3 1195 aaPredicted RBP22.43■■□□□ 1.18
SDC2-205ENST00000520233 CRBNQ96SW2 442 aa22.43■■□□□ 1.18
SDC2-205ENST00000520233 NYXQ9GZU5 481 aa22.43■■□□□ 1.18
SDC2-205ENST00000520233 CHMP4BQ9H444 224 aaKnown RBP22.43■■□□□ 1.18
SDC2-205ENST00000520233 TRMT112Q9UI30 125 aaKnown RBP22.43■■□□□ 1.18
SDC2-205ENST00000520233 ZBTB7BO15156 539 aaPredicted RBP22.42■■□□□ 1.18
SDC2-205ENST00000520233 ZBTB7AO95365 584 aa22.42■■□□□ 1.18
SDC2-205ENST00000520233 SERPINB2P05120 415 aa22.42■■□□□ 1.18
SDC2-205ENST00000520233 NBPF5PQ86XG9 351 aaPredicted RBP22.42■■□□□ 1.18
SDC2-205ENST00000520233 PARP3Q9Y6F1 533 aa22.42■■□□□ 1.18
SDC2-205ENST00000520233 FAM177BA6PVY3 158 aa22.41■■□□□ 1.18
SDC2-205ENST00000520233 GNAI3P08754 354 aa22.41■■□□□ 1.18
SDC2-205ENST00000520233 TPTE2Q6XPS3 522 aa22.41■■□□□ 1.18
SDC2-205ENST00000520233 MEIS3Q99687 375 aa22.41■■□□□ 1.18
SDC2-205ENST00000520233 SH3TC1Q8TE82 1336 aa22.4■■□□□ 1.18
SDC2-205ENST00000520233 CASP7P55210 303 aa22.4■■□□□ 1.18
SDC2-205ENST00000520233 IRX6P78412 446 aaPredicted RBP22.4■■□□□ 1.18
SDC2-205ENST00000520233 UBE3BQ7Z3V4 1068 aa22.4■■□□□ 1.18
SDC2-205ENST00000520233 FAM89AQ96GI7 184 aa22.4■■□□□ 1.18
SDC2-205ENST00000520233 CDHR2Q9BYE9 1310 aa22.39■■□□□ 1.18
SDC2-205ENST00000520233 NBPF7P0C2Y1 421 aaPredicted RBP22.39■■□□□ 1.17
SDC2-205ENST00000520233 ATF5Q9Y2D1 282 aaPredicted RBP22.39■■□□□ 1.17
SDC2-205ENST00000520233 NEFLP07196 543 aa22.38■■□□□ 1.17
SDC2-205ENST00000520233 UBTFL1P0CB47 393 aaPredicted RBP22.38■■□□□ 1.17
SDC2-205ENST00000520233 GTF2E1P29083 439 aaPredicted RBP22.38■■□□□ 1.17
SDC2-205ENST00000520233 CNBD1Q8NA66 436 aa22.38■■□□□ 1.17
SDC2-205ENST00000520233 JARID2Q92833 1246 aaPredicted RBP22.38■■□□□ 1.17
SDC2-205ENST00000520233 HDAC5Q9UQL6 1122 aa22.38■■□□□ 1.17
SDC2-205ENST00000520233 NPHP1O15259 732 aa22.37■■□□□ 1.17
SDC2-205ENST00000520233 ERFEQ4G0M1 354 aa22.37■■□□□ 1.17
SDC2-205ENST00000520233 RTL5Q5HYW3 569 aaPredicted RBP22.37■■□□□ 1.17
SDC2-205ENST00000520233 PRR5LQ6MZQ0 368 aa22.37■■□□□ 1.17
SDC2-205ENST00000520233 NUTM1Q86Y26 1132 aa22.37■■□□□ 1.17
SDC2-205ENST00000520233 NRXN2Q9P2S2 1712 aa22.37■■□□□ 1.17
SDC2-205ENST00000520233 HSP90B1P14625 803 aaKnown RBP22.36■■□□□ 1.17
SDC2-205ENST00000520233 POLD1P28340 1107 aa22.36■■□□□ 1.17
SDC2-205ENST00000520233 SLC10A5Q5PT55 438 aa22.36■■□□□ 1.17
SDC2-205ENST00000520233 SYNE4Q8N205 404 aa22.36■■□□□ 1.17
SDC2-205ENST00000520233 EXOC6Q8TAG9 804 aa22.36■■□□□ 1.17
SDC2-205ENST00000520233 ZBTB40Q9NUA8 1239 aa22.36■■□□□ 1.17
SDC2-205ENST00000520233 IRS4O14654 1257 aaPredicted RBP22.35■■□□□ 1.17
SDC2-205ENST00000520233 ST5P78524 1137 aa22.35■■□□□ 1.17
SDC2-205ENST00000520233 PLA2G12BQ9BX93 195 aa22.35■■□□□ 1.17
SDC2-205ENST00000520233 GNAI2P04899 355 aa22.34■■□□□ 1.17
SDC2-205ENST00000520233 AAMPQ13685 434 aa22.34■■□□□ 1.17
SDC2-205ENST00000520233 SUCLG2Q96I99 432 aa22.34■■□□□ 1.17
SDC2-205ENST00000520233 SGIP1Q9BQI5 828 aa22.34■■□□□ 1.17
SDC2-205ENST00000520233 RIC1Q4ADV7 1423 aa22.33■■□□□ 1.17
SDC2-205ENST00000520233 PDE8AO60658 829 aa22.33■■□□□ 1.17
SDC2-205ENST00000520233 SPON1Q9HCB6 807 aa22.33■■□□□ 1.17
SDC2-205ENST00000520233 ABCC12Q96J65 1359 aa22.33■■□□□ 1.17
SDC2-205ENST00000520233 HCLS1P14317 486 aaPredicted RBP22.32■■□□□ 1.16
SDC2-205ENST00000520233 PTGER2P43116 358 aa22.32■■□□□ 1.16
SDC2-205ENST00000520233 KAZALD1Q96I82 304 aa22.32■■□□□ 1.16
SDC2-205ENST00000520233 LRRFIP2Q9Y608 721 aaKnown RBP22.32■■□□□ 1.16
SDC2-205ENST00000520233 FOXO4P98177 505 aa22.31■■□□□ 1.16
SDC2-205ENST00000520233 CCDC24Q8N4L8 307 aa22.31■■□□□ 1.16
SDC2-205ENST00000520233 BRIP1Q9BX63 1249 aa22.3■■□□□ 1.16
SDC2-205ENST00000520233 BICC1Q9H694 974 aaKnown RBP22.3■■□□□ 1.16
SDC2-205ENST00000520233 EPHA10Q5JZY3 1008 aa22.29■■□□□ 1.16
SDC2-205ENST00000520233 NLRP3Q96P20 1036 aa22.29■■□□□ 1.16
SDC2-205ENST00000520233 C1orf115Q9H7X2 142 aa22.29■■□□□ 1.16
SDC2-205ENST00000520233 LAMB2P55268 1798 aa22.29■■□□□ 1.16
SDC2-205ENST00000520233 DDX60Q8IY21 1712 aaKnown RBP22.28■■□□□ 1.16
SDC2-205ENST00000520233 CTSWP56202 376 aa22.28■■□□□ 1.16
SDC2-205ENST00000520233 RABL6Q3YEC7 729 aaPredicted RBP22.28■■□□□ 1.16
SDC2-205ENST00000520233 ANKRD44Q8N8A2 993 aa22.28■■□□□ 1.16
SDC2-205ENST00000520233 KLRG2A4D1S0 409 aaPredicted RBP22.27■■□□□ 1.16
SDC2-205ENST00000520233 CSF1RP07333 972 aa22.27■■□□□ 1.16
SDC2-205ENST00000520233 SF3B3Q15393 1217 aaKnown RBP22.27■■□□□ 1.16
SDC2-205ENST00000520233 C10orf71Q711Q0 1435 aa22.27■■□□□ 1.16
SDC2-205ENST00000520233 TTLL11Q8NHH1 800 aa22.27■■□□□ 1.16
SDC2-205ENST00000520233 PDE6BP35913 854 aa22.26■■□□□ 1.15
SDC2-205ENST00000520233 MTX1Q13505 466 aa22.26■■□□□ 1.15
SDC2-205ENST00000520233 LMBR1LQ6UX01 489 aa22.26■■□□□ 1.15
SDC2-205ENST00000520233 C3orf67Q6ZVT6 689 aa22.26■■□□□ 1.15
SDC2-205ENST00000520233 ERICH6BQ5W0A0 696 aa22.25■■□□□ 1.15
SDC2-205ENST00000520233 RPAP2Q8IXW5 612 aaPredicted RBP22.25■■□□□ 1.15
SDC2-205ENST00000520233 TNRC6CQ9HCJ0 1690 aaKnown RBP22.24■■□□□ 1.15
SDC2-205ENST00000520233 ATP8B2P98198 1209 aa22.24■■□□□ 1.15
SDC2-205ENST00000520233 CRY2Q49AN0 593 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms