RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 C16orf71Q8IYS4 520 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-219ENST00000520158 SMC1BQ8NDV3 1235 aa7.5□□□□□ -1.21
CTNNA1-219ENST00000520158 BABAM1Q9NWV8 329 aa7.5□□□□□ -1.21
CTNNA1-219ENST00000520158 KDM3BQ7LBC6 1761 aa7.49□□□□□ -1.21
CTNNA1-219ENST00000520158 C21orf2O43822 256 aa7.49□□□□□ -1.21
CTNNA1-219ENST00000520158 NPR1P16066 1061 aa7.49□□□□□ -1.21
CTNNA1-219ENST00000520158 EIF4A1P60842 406 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-219ENST00000520158 CNGB1Q14028 1251 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-219ENST00000520158 DCTN1Q14203 1278 aa7.49□□□□□ -1.21
CTNNA1-219ENST00000520158 NFE2L2Q16236 605 aa7.49□□□□□ -1.21
CTNNA1-219ENST00000520158 DPY19L2Q6NUT2 758 aa7.49□□□□□ -1.21
CTNNA1-219ENST00000520158 ZNF622Q969S3 477 aaKnown RBP eCLIP7.49□□□□□ -1.21
CTNNA1-219ENST00000520158 KLRG1Q96E93 195 aa7.49□□□□□ -1.21
CTNNA1-219ENST00000520158 ERBB4Q15303 1308 aa7.49□□□□□ -1.21
CTNNA1-219ENST00000520158 LAMB4A4D0S4 1761 aa7.48□□□□□ -1.21
CTNNA1-219ENST00000520158 NEFMP07197 916 aa7.48□□□□□ -1.21
CTNNA1-219ENST00000520158 RALBP1Q15311 655 aa7.48□□□□□ -1.21
CTNNA1-219ENST00000520158 HLFQ16534 295 aa7.48□□□□□ -1.21
CTNNA1-219ENST00000520158 CRY2Q49AN0 593 aa7.48□□□□□ -1.21
CTNNA1-219ENST00000520158 RIC1Q4ADV7 1423 aa7.48□□□□□ -1.21
CTNNA1-219ENST00000520158 PRPF40BQ6NWY9 871 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-219ENST00000520158 NBPF5PQ86XG9 351 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-219ENST00000520158 TIAM2Q8IVF5 1701 aa7.48□□□□□ -1.21
CTNNA1-219ENST00000520158 TAOK3Q9H2K8 898 aa7.48□□□□□ -1.21
CTNNA1-219ENST00000520158 NIP7Q9Y221 180 aaKnown RBP eCLIP7.48□□□□□ -1.21
CTNNA1-219ENST00000520158 ZNF330Q9Y3S2 320 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-219ENST00000520158 NUP98P52948 1817 aa7.48□□□□□ -1.21
CTNNA1-219ENST00000520158 IBTKQ9P2D0 1353 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-219ENST00000520158 SNED1Q8TER0 1413 aa7.47□□□□□ -1.21
CTNNA1-219ENST00000520158 ALDH1B1P30837 517 aa7.47□□□□□ -1.21
CTNNA1-219ENST00000520158 HOXA10P31260 410 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-219ENST00000520158 ERFEQ4G0M1 354 aa7.47□□□□□ -1.21
CTNNA1-219ENST00000520158 GRIPAP1Q4V328 841 aa7.47□□□□□ -1.21
CTNNA1-219ENST00000520158 LRP10Q7Z4F1 713 aa7.47□□□□□ -1.21
CTNNA1-219ENST00000520158 RTKN2Q8IZC4 609 aa7.47□□□□□ -1.21
CTNNA1-219ENST00000520158 CCDC24Q8N4L8 307 aa7.47□□□□□ -1.21
CTNNA1-219ENST00000520158 L3MBTL3Q96JM7 780 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-219ENST00000520158 MIS18AQ9NYP9 233 aa7.47□□□□□ -1.21
CTNNA1-219ENST00000520158 MAP3K15Q6ZN16 1313 aa7.47□□□□□ -1.21
CTNNA1-219ENST00000520158 SCN4AP35499 1836 aa7.46□□□□□ -1.21
CTNNA1-219ENST00000520158 PIP4K2AP48426 406 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-219ENST00000520158 FKBP4Q02790 459 aaKnown RBP eCLIP7.46□□□□□ -1.22
CTNNA1-219ENST00000520158 CCDC93Q567U6 631 aa7.46□□□□□ -1.22
CTNNA1-219ENST00000520158 CC2D2BQ6DHV5 1058 aa7.46□□□□□ -1.22
CTNNA1-219ENST00000520158 GIGYF2Q6Y7W6 1299 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-219ENST00000520158 ZNF34Q8IZ26 560 aa7.46□□□□□ -1.22
CTNNA1-219ENST00000520158 FAM163AQ96GL9 167 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-219ENST00000520158 NYXQ9GZU5 481 aa7.46□□□□□ -1.22
CTNNA1-219ENST00000520158 SPDYE4A6NLX3 237 aa7.45□□□□□ -1.22
CTNNA1-219ENST00000520158 FZD9O00144 591 aa7.45□□□□□ -1.22
CTNNA1-219ENST00000520158 NPHP1O15259 732 aa7.45□□□□□ -1.22
CTNNA1-219ENST00000520158 PDIA6Q15084 440 aa7.45□□□□□ -1.22
CTNNA1-219ENST00000520158 TAF7LQ5H9L4 462 aa7.45□□□□□ -1.22
CTNNA1-219ENST00000520158 SLC10A5Q5PT55 438 aa7.45□□□□□ -1.22
CTNNA1-219ENST00000520158 MAMSTRQ6ZN01 415 aa7.45□□□□□ -1.22
CTNNA1-219ENST00000520158 PSMD1Q99460 953 aa7.45□□□□□ -1.22
CTNNA1-219ENST00000520158 CACNA1SQ13698 1873 aa7.45□□□□□ -1.22
CTNNA1-219ENST00000520158 IQCA1LA6NCM1 817 aa7.44□□□□□ -1.22
CTNNA1-219ENST00000520158 DDNO94850 711 aaPredicted RBP7.44□□□□□ -1.22
CTNNA1-219ENST00000520158 TMPOP42166 694 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-219ENST00000520158 RIPK4P57078 832 aa7.44□□□□□ -1.22
CTNNA1-219ENST00000520158 HTRA3P83110 453 aa7.44□□□□□ -1.22
CTNNA1-219ENST00000520158 CRAMP1Q96RY5 1269 aa7.44□□□□□ -1.22
CTNNA1-219ENST00000520158 CHMP4AQ9BY43 222 aa7.44□□□□□ -1.22
CTNNA1-219ENST00000520158 VPS33BQ9H267 617 aa7.44□□□□□ -1.22
CTNNA1-219ENST00000520158 MAPK8IP3Q9UPT6 1336 aa7.44□□□□□ -1.22
CTNNA1-219ENST00000520158 CHL1O00533 1208 aa7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 NTSR2O95665 410 aa7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 IARSP41252 1262 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 LMOD3Q0VAK6 560 aa7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 PARP10Q53GL7 1025 aa7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 SUSD4Q5VX71 490 aa7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 KIF6Q6ZMV9 814 aa7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 TTLL7Q6ZT98 887 aa7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 PPP1R42Q7Z4L9 355 aa7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 LDHDQ86WU2 507 aa7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 SYNE4Q8N205 404 aa7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 THUMPD2Q9BTF0 503 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 TAF1DQ9H5J8 278 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 CREBZFQ9NS37 354 aa7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 METRNQ9UJH8 293 aa7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 RRP7AQ9Y3A4 280 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 RNF123Q5XPI4 1314 aa7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 UBN2Q6ZU65 1347 aa7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 PASKQ96RG2 1323 aa7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 ADAMTSL1Q8N6G6 1762 aa7.43□□□□□ -1.22
CTNNA1-219ENST00000520158 ITGBL1O95965 494 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-219ENST00000520158 GTF2E1P29083 439 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-219ENST00000520158 ASTLQ6HA08 431 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-219ENST00000520158 PNMA8AQ86V59 439 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-219ENST00000520158 GPC2Q8N158 579 aa7.42□□□□□ -1.22
CTNNA1-219ENST00000520158 TSPYL4Q9UJ04 414 aa7.42□□□□□ -1.22
CTNNA1-219ENST00000520158 ABCC12Q96J65 1359 aa7.42□□□□□ -1.22
CTNNA1-219ENST00000520158 HOXB7P09629 217 aa7.41□□□□□ -1.22
CTNNA1-219ENST00000520158 MYL6BP14649 208 aa7.41□□□□□ -1.22
CTNNA1-219ENST00000520158 TCIRG1Q13488 830 aa7.41□□□□□ -1.22
CTNNA1-219ENST00000520158 OLFM4Q6UX06 510 aa7.41□□□□□ -1.22
CTNNA1-219ENST00000520158 NUTM1Q86Y26 1132 aa7.41□□□□□ -1.22
CTNNA1-219ENST00000520158 CDAN1Q8IWY9 1227 aa7.41□□□□□ -1.22
CTNNA1-219ENST00000520158 NGEFQ8N5V2 710 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms