RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 TEFQ10587 303 aa11.61□□□□□ -0.55
PABPC1-213ENST00000519848 PRR5LQ6MZQ0 368 aa11.61□□□□□ -0.55
PABPC1-213ENST00000519848 COL4A5P29400 1685 aa11.61□□□□□ -0.55
PABPC1-213ENST00000519848 COL4A1P02462 1669 aa11.6□□□□□ -0.55
PABPC1-213ENST00000519848 ZPR1O75312 459 aa11.6□□□□□ -0.55
PABPC1-213ENST00000519848 DOK7Q18PE1 504 aa11.6□□□□□ -0.55
PABPC1-213ENST00000519848 ZNF330Q9Y3S2 320 aaPredicted RBP11.6□□□□□ -0.55
PABPC1-213ENST00000519848 DICER1Q9UPY3 1922 aaKnown RBP11.6□□□□□ -0.55
PABPC1-213ENST00000519848 NUP98P52948 1817 aa11.6□□□□□ -0.55
PABPC1-213ENST00000519848 SNED1Q8TER0 1413 aa11.6□□□□□ -0.55
PABPC1-213ENST00000519848 ABCC12Q96J65 1359 aa11.59□□□□□ -0.55
PABPC1-213ENST00000519848 BTBD11A6QL63 1104 aa11.59□□□□□ -0.55
PABPC1-213ENST00000519848 CHRM1P11229 460 aaPredicted RBP11.59□□□□□ -0.55
PABPC1-213ENST00000519848 HTRA3P83110 453 aa11.59□□□□□ -0.55
PABPC1-213ENST00000519848 TTC5Q8N0Z6 440 aa11.59□□□□□ -0.55
PABPC1-213ENST00000519848 PIM2Q9P1W9 311 aa11.59□□□□□ -0.55
PABPC1-213ENST00000519848 HMGB2P26583 209 aaKnown RBP11.58□□□□□ -0.56
PABPC1-213ENST00000519848 DALRD3Q5D0E6 543 aaKnown RBP11.58□□□□□ -0.56
PABPC1-213ENST00000519848 FMNL2Q96PY5 1086 aa11.58□□□□□ -0.56
PABPC1-213ENST00000519848 IL6STP40189 918 aaPredicted RBP11.57□□□□□ -0.56
PABPC1-213ENST00000519848 HLFQ16534 295 aa11.57□□□□□ -0.56
PABPC1-213ENST00000519848 OLFM4Q6UX06 510 aa11.57□□□□□ -0.56
PABPC1-213ENST00000519848 C2CD5Q86YS7 1000 aa11.57□□□□□ -0.56
PABPC1-213ENST00000519848 CFAP53Q96M91 514 aa11.57□□□□□ -0.56
PABPC1-213ENST00000519848 RNF181Q9P0P0 153 aa11.57□□□□□ -0.56
PABPC1-213ENST00000519848 LAMB2P55268 1798 aa11.56□□□□□ -0.56
PABPC1-213ENST00000519848 HSPA6P17066 643 aa11.56□□□□□ -0.56
PABPC1-213ENST00000519848 LRP10Q7Z4F1 713 aa11.56□□□□□ -0.56
PABPC1-213ENST00000519848 DZIP3Q86Y13 1208 aaKnown RBP11.56□□□□□ -0.56
PABPC1-213ENST00000519848 ZNF687Q8N1G0 1237 aa11.56□□□□□ -0.56
PABPC1-213ENST00000519848 ANKRD36CQ5JPF3 1778 aa11.55□□□□□ -0.56
PABPC1-213ENST00000519848 POTECB2RU33 542 aa11.55□□□□□ -0.56
PABPC1-213ENST00000519848 STARD3NLO95772 234 aa11.55□□□□□ -0.56
PABPC1-213ENST00000519848 GSE1Q14687 1217 aa11.55□□□□□ -0.56
PABPC1-213ENST00000519848 UBN2Q6ZU65 1347 aa11.55□□□□□ -0.56
PABPC1-213ENST00000519848 KRT24Q2M2I5 525 aa11.54□□□□□ -0.56
PABPC1-213ENST00000519848 TTLL7Q6ZT98 887 aa11.54□□□□□ -0.56
PABPC1-213ENST00000519848 LTBP1Q14766 1721 aa11.53□□□□□ -0.56
PABPC1-213ENST00000519848 G3V3G9 751 aa11.53□□□□□ -0.56
PABPC1-213ENST00000519848 C21orf2O43822 256 aa11.53□□□□□ -0.56
PABPC1-213ENST00000519848 EIF4A1P60842 406 aaKnown RBP11.53□□□□□ -0.56
PABPC1-213ENST00000519848 NFE2L2Q16236 605 aa11.53□□□□□ -0.56
PABPC1-213ENST00000519848 PROSER3Q2NL68 480 aa11.53□□□□□ -0.56
PABPC1-213ENST00000519848 ADAMTSL1Q8N6G6 1762 aa11.52□□□□□ -0.57
PABPC1-213ENST00000519848 ANXA1P04083 346 aa11.52□□□□□ -0.57
PABPC1-213ENST00000519848 SNRPA1P09661 255 aaKnown RBP11.52□□□□□ -0.57
PABPC1-213ENST00000519848 SRGNP10124 158 aa11.52□□□□□ -0.57
PABPC1-213ENST00000519848 PDIA6Q15084 440 aa11.52□□□□□ -0.57
PABPC1-213ENST00000519848 DNAJC5GQ8N7S2 189 aa11.52□□□□□ -0.57
PABPC1-213ENST00000519848 TTLL6Q8N841 843 aa11.52□□□□□ -0.57
PABPC1-213ENST00000519848 C7orf43Q8WVR3 580 aa11.52□□□□□ -0.57
PABPC1-213ENST00000519848 NUDCQ9Y266 331 aa11.52□□□□□ -0.57
PABPC1-213ENST00000519848 RRP7AQ9Y3A4 280 aaKnown RBP11.52□□□□□ -0.57
PABPC1-213ENST00000519848 TAF1P21675 1872 aa11.52□□□□□ -0.57
PABPC1-213ENST00000519848 A0A087WZG4 1122 aa11.51□□□□□ -0.57
PABPC1-213ENST00000519848 TAF7Q15545 349 aaPredicted RBP11.51□□□□□ -0.57
PABPC1-213ENST00000519848 PRPF40BQ6NWY9 871 aaKnown RBP11.51□□□□□ -0.57
PABPC1-213ENST00000519848 CCDC146Q8IYE0 955 aa11.51□□□□□ -0.57
PABPC1-213ENST00000519848 CNBD1Q8NA66 436 aa11.51□□□□□ -0.57
PABPC1-213ENST00000519848 BRIP1Q9BX63 1249 aa11.51□□□□□ -0.57
PABPC1-213ENST00000519848 RRAGCQ9HB90 399 aa11.51□□□□□ -0.57
PABPC1-213ENST00000519848 DDX60Q8IY21 1712 aaKnown RBP11.5□□□□□ -0.57
PABPC1-213ENST00000519848 FAM177BA6PVY3 158 aa11.5□□□□□ -0.57
PABPC1-213ENST00000519848 HTATSF1O43719 755 aaKnown RBP11.5□□□□□ -0.57
PABPC1-213ENST00000519848 DDX10Q13206 875 aaKnown RBP11.5□□□□□ -0.57
PABPC1-213ENST00000519848 PDAP1Q13442 181 aaKnown RBP11.5□□□□□ -0.57
PABPC1-213ENST00000519848 NUTM1Q86Y26 1132 aa11.5□□□□□ -0.57
PABPC1-213ENST00000519848 ZNF622Q969S3 477 aaKnown RBP eCLIP11.5□□□□□ -0.57
PABPC1-213ENST00000519848 TEX13AQ9BXU3 409 aaPredicted RBP11.5□□□□□ -0.57
PABPC1-213ENST00000519848 TOMM70O94826 608 aa11.49□□□□□ -0.57
PABPC1-213ENST00000519848 LMNB1P20700 586 aa11.49□□□□□ -0.57
PABPC1-213ENST00000519848 NGEFQ8N5V2 710 aa11.49□□□□□ -0.57
PABPC1-213ENST00000519848 RTF1Q92541 710 aaKnown RBP11.49□□□□□ -0.57
PABPC1-213ENST00000519848 ZNF541Q9H0D2 1346 aa11.49□□□□□ -0.57
PABPC1-213ENST00000519848 DUOX1Q9NRD9 1551 aa11.49□□□□□ -0.57
PABPC1-213ENST00000519848 KLRG2A4D1S0 409 aaPredicted RBP11.48□□□□□ -0.57
PABPC1-213ENST00000519848 H0YIN7 160 aa11.48□□□□□ -0.57
PABPC1-213ENST00000519848 RIMBP2O15034 1052 aa11.48□□□□□ -0.57
PABPC1-213ENST00000519848 CCDC184Q52MB2 194 aa11.48□□□□□ -0.57
PABPC1-213ENST00000519848 ZNF428Q96B54 188 aa11.48□□□□□ -0.57
PABPC1-213ENST00000519848 NIP7Q9Y221 180 aaKnown RBP eCLIP11.48□□□□□ -0.57
PABPC1-213ENST00000519848 RIC1Q4ADV7 1423 aa11.48□□□□□ -0.57
PABPC1-213ENST00000519848 MAP3K15Q6ZN16 1313 aa11.47□□□□□ -0.57
PABPC1-213ENST00000519848 LTBP3Q9NS15 1303 aa11.47□□□□□ -0.57
PABPC1-213ENST00000519848 MYL6BP14649 208 aa11.47□□□□□ -0.57
PABPC1-213ENST00000519848 GPTP24298 496 aa11.47□□□□□ -0.57
PABPC1-213ENST00000519848 TMPOP42166 694 aaKnown RBP11.47□□□□□ -0.57
PABPC1-213ENST00000519848 ERFEQ4G0M1 354 aa11.47□□□□□ -0.57
PABPC1-213ENST00000519848 STYK1Q6J9G0 422 aa11.47□□□□□ -0.57
PABPC1-213ENST00000519848 SETDB2Q96T68 719 aa11.47□□□□□ -0.57
PABPC1-213ENST00000519848 ZBTB3Q9H5J0 574 aa11.47□□□□□ -0.57
PABPC1-213ENST00000519848 LRRC37AA6NMS7 1700 aa11.46□□□□□ -0.57
PABPC1-213ENST00000519848 GLTPD2A6NH11 291 aa11.46□□□□□ -0.57
PABPC1-213ENST00000519848 NTSR2O95665 410 aa11.46□□□□□ -0.57
PABPC1-213ENST00000519848 SUSD4Q5VX71 490 aa11.46□□□□□ -0.57
PABPC1-213ENST00000519848 GPR153Q6NV75 609 aa11.46□□□□□ -0.57
PABPC1-213ENST00000519848 NBPF5PQ86XG9 351 aaPredicted RBP11.46□□□□□ -0.57
PABPC1-213ENST00000519848 SYNE4Q8N205 404 aa11.46□□□□□ -0.57
PABPC1-213ENST00000519848 RBM46Q8TBY0 533 aaKnown RBP11.46□□□□□ -0.57
PABPC1-213ENST00000519848 MYBBP1AQ9BQG0 1328 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 475 ms