RNA–Protein interactions for RNA: ENST00000517990.5

PABPC1-204, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-204ENST00000517990 AKAP4Q5JQC9 854 aa8.44□□□□□ -1.06
PABPC1-204ENST00000517990 SOGA3Q5TF21 947 aa8.44□□□□□ -1.06
PABPC1-204ENST00000517990 INTS5Q6P9B9 1019 aaKnown RBP8.44□□□□□ -1.06
PABPC1-204ENST00000517990 SOS1Q07889 1333 aaPredicted RBP8.44□□□□□ -1.06
PABPC1-204ENST00000517990 CCDC88AQ3V6T2 1871 aa8.44□□□□□ -1.06
PABPC1-204ENST00000517990 COL15A1P39059 1388 aa8.44□□□□□ -1.06
PABPC1-204ENST00000517990 TIAM2Q8IVF5 1701 aa8.43□□□□□ -1.06
PABPC1-204ENST00000517990 IQCA1LA6NCM1 817 aa8.43□□□□□ -1.06
PABPC1-204ENST00000517990 STARD3NLO95772 234 aa8.43□□□□□ -1.06
PABPC1-204ENST00000517990 PDE6BP35913 854 aa8.43□□□□□ -1.06
PABPC1-204ENST00000517990 SULT6B1Q6IMI4 303 aa8.43□□□□□ -1.06
PABPC1-204ENST00000517990 DNAJC10Q8IXB1 793 aa8.43□□□□□ -1.06
PABPC1-204ENST00000517990 ZNF622Q969S3 477 aaKnown RBP eCLIP8.43□□□□□ -1.06
PABPC1-204ENST00000517990 PRDM10Q9NQV6 1147 aa8.43□□□□□ -1.06
PABPC1-204ENST00000517990 TJP1Q07157 1748 aa8.43□□□□□ -1.06
PABPC1-204ENST00000517990 DLEC1Q9Y238 1755 aa8.43□□□□□ -1.06
PABPC1-204ENST00000517990 CTCFP49711 727 aaPredicted RBP8.42□□□□□ -1.06
PABPC1-204ENST00000517990 MORC1Q86VD1 984 aa8.42□□□□□ -1.06
PABPC1-204ENST00000517990 VSIG10Q8N0Z9 540 aa8.42□□□□□ -1.06
PABPC1-204ENST00000517990 SLC4A5Q9BY07 1137 aa8.42□□□□□ -1.06
PABPC1-204ENST00000517990 SLC52A2Q9HAB3 445 aa8.42□□□□□ -1.06
PABPC1-204ENST00000517990 MKRN1Q9UHC7 482 aaKnown RBP8.42□□□□□ -1.06
PABPC1-204ENST00000517990 AFDNP55196 1824 aaKnown RBP8.42□□□□□ -1.06
PABPC1-204ENST00000517990 SCN11AQ9UI33 1791 aa8.41□□□□□ -1.06
PABPC1-204ENST00000517990 NRXN2Q9P2S2 1712 aa8.41□□□□□ -1.06
PABPC1-204ENST00000517990 NFKBIEO00221 500 aa8.41□□□□□ -1.06
PABPC1-204ENST00000517990 CYP19A1P11511 503 aaPredicted RBP8.41□□□□□ -1.06
PABPC1-204ENST00000517990 LCE2AQ5TA79 106 aaPredicted RBP8.41□□□□□ -1.06
PABPC1-204ENST00000517990 TTC5Q8N0Z6 440 aa8.41□□□□□ -1.06
PABPC1-204ENST00000517990 CNKSR1Q969H4 720 aa8.41□□□□□ -1.06
PABPC1-204ENST00000517990 BRIP1Q9BX63 1249 aa8.41□□□□□ -1.06
PABPC1-204ENST00000517990 TAOK3Q9H2K8 898 aa8.41□□□□□ -1.06
PABPC1-204ENST00000517990 DICER1Q9UPY3 1922 aaKnown RBP8.41□□□□□ -1.06
PABPC1-204ENST00000517990 CNTNAP1P78357 1384 aa8.4□□□□□ -1.06
PABPC1-204ENST00000517990 LTBP3Q9NS15 1303 aa8.4□□□□□ -1.06
PABPC1-204ENST00000517990 C21orf2O43822 256 aa8.4□□□□□ -1.06
PABPC1-204ENST00000517990 CANXP27824 592 aaKnown RBP8.4□□□□□ -1.06
PABPC1-204ENST00000517990 ST5P78524 1137 aa8.4□□□□□ -1.06
PABPC1-204ENST00000517990 BICDL1Q6ZP65 573 aa8.4□□□□□ -1.06
PABPC1-204ENST00000517990 LDHDQ86WU2 507 aa8.4□□□□□ -1.06
PABPC1-204ENST00000517990 AEBP1Q8IUX7 1158 aa8.4□□□□□ -1.06
PABPC1-204ENST00000517990 TEX13AQ9BXU3 409 aaPredicted RBP8.4□□□□□ -1.06
PABPC1-204ENST00000517990 PRKD2Q9BZL6 878 aa8.4□□□□□ -1.06
PABPC1-204ENST00000517990 TIMELESSQ9UNS1 1208 aa8.4□□□□□ -1.06
PABPC1-204ENST00000517990 ZBTB1Q9Y2K1 713 aa8.4□□□□□ -1.06
PABPC1-204ENST00000517990 CARMIL3Q8ND23 1372 aa8.39□□□□□ -1.07
PABPC1-204ENST00000517990 TMEM88BA6NKF7 163 aa8.39□□□□□ -1.07
PABPC1-204ENST00000517990 RNMTO43148 476 aaKnown RBP8.39□□□□□ -1.07
PABPC1-204ENST00000517990 SETDB2Q96T68 719 aa8.39□□□□□ -1.07
PABPC1-204ENST00000517990 ADAMTS7Q9UKP4 1686 aa8.39□□□□□ -1.07
PABPC1-204ENST00000517990 POTECB2RU33 542 aa8.38□□□□□ -1.07
PABPC1-204ENST00000517990 FOXN1O15353 648 aa8.38□□□□□ -1.07
PABPC1-204ENST00000517990 SLC39A6Q13433 755 aa8.38□□□□□ -1.07
PABPC1-204ENST00000517990 STYK1Q6J9G0 422 aa8.38□□□□□ -1.07
PABPC1-204ENST00000517990 CNBD1Q8NA66 436 aa8.38□□□□□ -1.07
PABPC1-204ENST00000517990 MASTLQ96GX5 879 aa8.38□□□□□ -1.07
PABPC1-204ENST00000517990 BEGAINQ9BUH8 593 aa8.38□□□□□ -1.07
PABPC1-204ENST00000517990 PANK3Q9H999 370 aa8.38□□□□□ -1.07
PABPC1-204ENST00000517990 ZNF330Q9Y3S2 320 aaPredicted RBP8.38□□□□□ -1.07
PABPC1-204ENST00000517990 KNSTRNQ9Y448 316 aa8.38□□□□□ -1.07
PABPC1-204ENST00000517990 FER1L6Q2WGJ9 1857 aa8.38□□□□□ -1.07
PABPC1-204ENST00000517990 SCN4AP35499 1836 aa8.38□□□□□ -1.07
PABPC1-204ENST00000517990 DDNO94850 711 aaPredicted RBP8.37□□□□□ -1.07
PABPC1-204ENST00000517990 IL13P35225 146 aa8.37□□□□□ -1.07
PABPC1-204ENST00000517990 EIF5P55010 431 aaKnown RBP8.37□□□□□ -1.07
PABPC1-204ENST00000517990 MAP2K1Q02750 393 aaPredicted RBP8.37□□□□□ -1.07
PABPC1-204ENST00000517990 TEFQ10587 303 aa8.37□□□□□ -1.07
PABPC1-204ENST00000517990 EAPPQ56P03 285 aaPredicted RBP8.37□□□□□ -1.07
PABPC1-204ENST00000517990 PNMA8AQ86V59 439 aaPredicted RBP8.37□□□□□ -1.07
PABPC1-204ENST00000517990 BCL2L12Q9HB09 334 aa8.37□□□□□ -1.07
PABPC1-204ENST00000517990 LGR6Q9HBX8 967 aa8.37□□□□□ -1.07
PABPC1-204ENST00000517990 MRC1P22897 1456 aa8.37□□□□□ -1.07
PABPC1-204ENST00000517990 PASKQ96RG2 1323 aa8.36□□□□□ -1.07
PABPC1-204ENST00000517990 IL6STP40189 918 aaPredicted RBP8.36□□□□□ -1.07
PABPC1-204ENST00000517990 EIF4G2P78344 907 aaKnown RBP eCLIP8.36□□□□□ -1.07
PABPC1-204ENST00000517990 CCDC93Q567U6 631 aa8.36□□□□□ -1.07
PABPC1-204ENST00000517990 TBC1D9BQ66K14 1250 aa8.36□□□□□ -1.07
PABPC1-204ENST00000517990 PRR5LQ6MZQ0 368 aa8.36□□□□□ -1.07
PABPC1-204ENST00000517990 PRPF40BQ6NWY9 871 aaKnown RBP8.36□□□□□ -1.07
PABPC1-204ENST00000517990 TAF1DQ9H5J8 278 aaPredicted RBP8.36□□□□□ -1.07
PABPC1-204ENST00000517990 HACL1Q9UJ83 578 aa8.36□□□□□ -1.07
PABPC1-204ENST00000517990 ZNF652Q9Y2D9 606 aa8.36□□□□□ -1.07
PABPC1-204ENST00000517990 VEGFBP49765 207 aa8.35□□□□□ -1.07
PABPC1-204ENST00000517990 LBX1P52954 281 aa8.35□□□□□ -1.07
PABPC1-204ENST00000517990 DEFB115Q30KQ5 88 aa8.35□□□□□ -1.07
PABPC1-204ENST00000517990 RTKN2Q8IZC4 609 aa8.35□□□□□ -1.07
PABPC1-204ENST00000517990 WBP1LQ9NX94 342 aa8.35□□□□□ -1.07
PABPC1-204ENST00000517990 TBC1D2BQ9UPU7 963 aa8.35□□□□□ -1.07
PABPC1-204ENST00000517990 VIRMAQ69YN4 1812 aaKnown RBP8.35□□□□□ -1.07
PABPC1-204ENST00000517990 DIAPH1O60610 1272 aaKnown RBP8.34□□□□□ -1.07
PABPC1-204ENST00000517990 HMOX1P09601 288 aa8.34□□□□□ -1.07
PABPC1-204ENST00000517990 SRGNP10124 158 aa8.34□□□□□ -1.07
PABPC1-204ENST00000517990 EPHX2P34913 555 aa8.34□□□□□ -1.07
PABPC1-204ENST00000517990 ECE1P42892 770 aa8.34□□□□□ -1.07
PABPC1-204ENST00000517990 FKBP4Q02790 459 aaKnown RBP eCLIP8.34□□□□□ -1.07
PABPC1-204ENST00000517990 SUZ12Q15022 739 aaKnown RBP8.34□□□□□ -1.07
PABPC1-204ENST00000517990 NBPF5PQ86XG9 351 aaPredicted RBP8.34□□□□□ -1.07
PABPC1-204ENST00000517990 FMNL2Q96PY5 1086 aa8.34□□□□□ -1.07
PABPC1-204ENST00000517990 ABT1Q9ULW3 272 aaKnown RBP8.34□□□□□ -1.07
PABPC1-204ENST00000517990 CACNA1SQ13698 1873 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms