RNA–Protein interactions for RNA: ENST00000516098.1

RNU6-240P-201, Transcript of RNA, U6 small nuclear 240, pseudogene, humanhuman

BASIC

Gene RNU6-240P, Length 97 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-240P-201ENST00000516098 PCDHGA11Q9Y5H2 935 aa3.32□□□□□ -1.88
RNU6-240P-201ENST00000516098 PTCD1O75127 700 aaKnown RBP3.31□□□□□ -1.88
RNU6-240P-201ENST00000516098 TAL1P17542 331 aaPredicted RBP3.31□□□□□ -1.88
RNU6-240P-201ENST00000516098 EPHA4P54764 986 aa3.31□□□□□ -1.88
RNU6-240P-201ENST00000516098 PSMA6P60900 246 aaKnown RBP3.31□□□□□ -1.88
RNU6-240P-201ENST00000516098 SEMA3FQ13275 785 aa3.31□□□□□ -1.88
RNU6-240P-201ENST00000516098 WASHC4Q2M389 1173 aa3.31□□□□□ -1.88
RNU6-240P-201ENST00000516098 DMRTC2Q8IXT2 367 aaPredicted RBP3.31□□□□□ -1.88
RNU6-240P-201ENST00000516098 DCAF11Q8TEB1 546 aa3.31□□□□□ -1.88
RNU6-240P-201ENST00000516098 NUDT8Q8WV74 236 aa3.31□□□□□ -1.88
RNU6-240P-201ENST00000516098 SNRKQ9NRH2 765 aa3.31□□□□□ -1.88
RNU6-240P-201ENST00000516098 TBC1D2BQ9UPU7 963 aa3.31□□□□□ -1.88
RNU6-240P-201ENST00000516098 NOD1Q9Y239 953 aa3.31□□□□□ -1.88
RNU6-240P-201ENST00000516098 KIAA1324LA8MWY0 1029 aaPredicted RBP3.3□□□□□ -1.88
RNU6-240P-201ENST00000516098 SSTR4P31391 388 aa3.3□□□□□ -1.88
RNU6-240P-201ENST00000516098 GP2P55259 537 aaKnown RBP3.3□□□□□ -1.88
RNU6-240P-201ENST00000516098 GTF2IP78347 998 aa3.3□□□□□ -1.88
RNU6-240P-201ENST00000516098 PSME1Q06323 249 aa3.3□□□□□ -1.88
RNU6-240P-201ENST00000516098 IRF5Q13568 498 aa3.3□□□□□ -1.88
RNU6-240P-201ENST00000516098 POTEAQ6S8J7 498 aa3.3□□□□□ -1.88
RNU6-240P-201ENST00000516098 DZIP1LQ8IYY4 767 aaKnown RBP3.3□□□□□ -1.88
RNU6-240P-201ENST00000516098 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.3□□□□□ -1.88
RNU6-240P-201ENST00000516098 MEGF10Q96KG7 1140 aa3.3□□□□□ -1.88
RNU6-240P-201ENST00000516098 PNMA5Q96PV4 448 aa3.3□□□□□ -1.88
RNU6-240P-201ENST00000516098 DNAJB12Q9NXW2 375 aaKnown RBP3.3□□□□□ -1.88
RNU6-240P-201ENST00000516098 SFI1A8K8P3 1242 aa3.29□□□□□ -1.88
RNU6-240P-201ENST00000516098 VAC14Q08AM6 782 aa3.29□□□□□ -1.88
RNU6-240P-201ENST00000516098 WFDC8Q8IUA0 241 aa3.29□□□□□ -1.88
RNU6-240P-201ENST00000516098 TTC9Q92623 222 aa3.29□□□□□ -1.88
RNU6-240P-201ENST00000516098 HSH2DQ96JZ2 352 aa3.29□□□□□ -1.88
RNU6-240P-201ENST00000516098 SUSD3Q96L08 255 aa3.29□□□□□ -1.88
RNU6-240P-201ENST00000516098 PHACTR1Q9C0D0 580 aa3.29□□□□□ -1.88
RNU6-240P-201ENST00000516098 IGFLR1Q9H665 355 aa3.29□□□□□ -1.88
RNU6-240P-201ENST00000516098 AKTIPQ9H8T0 292 aa3.29□□□□□ -1.88
RNU6-240P-201ENST00000516098 SRA1Q9HD15 236 aaKnown RBP3.29□□□□□ -1.88
RNU6-240P-201ENST00000516098 NAGPAQ9UK23 515 aa3.29□□□□□ -1.88
RNU6-240P-201ENST00000516098 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.29□□□□□ -1.88
RNU6-240P-201ENST00000516098 GRIK1P39086 918 aa3.28□□□□□ -1.88
RNU6-240P-201ENST00000516098 CCINQ13939 588 aa3.28□□□□□ -1.88
RNU6-240P-201ENST00000516098 INTS5Q6P9B9 1019 aaKnown RBP3.28□□□□□ -1.88
RNU6-240P-201ENST00000516098 BTLAQ7Z6A9 289 aa3.28□□□□□ -1.88
RNU6-240P-201ENST00000516098 FAM35AQ86V20 835 aa3.28□□□□□ -1.88
RNU6-240P-201ENST00000516098 TMEM130Q8N3G9 435 aa3.28□□□□□ -1.88
RNU6-240P-201ENST00000516098 NFATC2IPQ8NCF5 419 aa3.28□□□□□ -1.88
RNU6-240P-201ENST00000516098 IL27Q8NEV9 243 aa3.28□□□□□ -1.88
RNU6-240P-201ENST00000516098 MRPL18Q9H0U6 180 aaKnown RBP3.28□□□□□ -1.88
RNU6-240P-201ENST00000516098 OAS3Q9Y6K5 1087 aaKnown RBP3.28□□□□□ -1.88
RNU6-240P-201ENST00000516098 M0R2N6 131 aa3.27□□□□□ -1.89
RNU6-240P-201ENST00000516098 IGLV1-40P01703 118 aa3.27□□□□□ -1.89
RNU6-240P-201ENST00000516098 EPB42P16452 691 aa3.27□□□□□ -1.89
RNU6-240P-201ENST00000516098 ARID4AP29374 1257 aaPredicted RBP3.27□□□□□ -1.89
RNU6-240P-201ENST00000516098 BRPF1P55201 1214 aaPredicted RBP3.27□□□□□ -1.89
RNU6-240P-201ENST00000516098 GRIK5Q16478 980 aa3.27□□□□□ -1.89
RNU6-240P-201ENST00000516098 TBCELQ5QJ74 424 aa3.27□□□□□ -1.89
RNU6-240P-201ENST00000516098 SH3PXD2AQ5TCZ1 1133 aa3.27□□□□□ -1.89
RNU6-240P-201ENST00000516098 IER5Q5VY09 327 aa3.27□□□□□ -1.89
RNU6-240P-201ENST00000516098 TRIM50Q86XT4 487 aa3.27□□□□□ -1.89
RNU6-240P-201ENST00000516098 TNS4Q8IZW8 715 aa3.27□□□□□ -1.89
RNU6-240P-201ENST00000516098 LPIN3Q9BQK8 851 aa3.27□□□□□ -1.89
RNU6-240P-201ENST00000516098 GSX2Q9BZM3 304 aa3.27□□□□□ -1.89
RNU6-240P-201ENST00000516098 RAXQ9Y2V3 346 aa3.27□□□□□ -1.89
RNU6-240P-201ENST00000516098 ARID1BQ8NFD5 2236 aaPredicted RBP3.27□□□□□ -1.89
RNU6-240P-201ENST00000516098 DLL1O00548 723 aa3.26□□□□□ -1.89
RNU6-240P-201ENST00000516098 MAP3K6O95382 1288 aa3.26□□□□□ -1.89
RNU6-240P-201ENST00000516098 SKIP12755 728 aa3.26□□□□□ -1.89
RNU6-240P-201ENST00000516098 CPB1P15086 417 aa3.26□□□□□ -1.89
RNU6-240P-201ENST00000516098 NFKB1P19838 968 aa3.26□□□□□ -1.89
RNU6-240P-201ENST00000516098 ATP1A2P50993 1020 aa3.26□□□□□ -1.89
RNU6-240P-201ENST00000516098 ELMSAN1Q6PJG2 1045 aa3.26□□□□□ -1.89
RNU6-240P-201ENST00000516098 Q6ZS46 218 aa3.26□□□□□ -1.89
RNU6-240P-201ENST00000516098 MAP4K3Q8IVH8 894 aa3.26□□□□□ -1.89
RNU6-240P-201ENST00000516098 STAG2Q8N3U4 1231 aa3.26□□□□□ -1.89
RNU6-240P-201ENST00000516098 ZNF280CQ8ND82 737 aa3.26□□□□□ -1.89
RNU6-240P-201ENST00000516098 KRTAP4-9Q9BYQ8 210 aa3.26□□□□□ -1.89
RNU6-240P-201ENST00000516098 C11orf16Q9NQ32 467 aa3.26□□□□□ -1.89
RNU6-240P-201ENST00000516098 HCN4Q9Y3Q4 1203 aa3.26□□□□□ -1.89
RNU6-240P-201ENST00000516098 F8W735 103 aaPredicted RBP3.25□□□□□ -1.89
RNU6-240P-201ENST00000516098 DEAF1O75398 565 aaPredicted RBP3.25□□□□□ -1.89
RNU6-240P-201ENST00000516098 SPINK2P20155 84 aa3.25□□□□□ -1.89
RNU6-240P-201ENST00000516098 GPLD1P80108 840 aa3.25□□□□□ -1.89
RNU6-240P-201ENST00000516098 NCOA4Q13772 614 aa3.25□□□□□ -1.89
RNU6-240P-201ENST00000516098 NEUROD2Q15784 382 aa3.25□□□□□ -1.89
RNU6-240P-201ENST00000516098 PERM1Q5SV97 790 aa3.25□□□□□ -1.89
RNU6-240P-201ENST00000516098 ALDH16A1Q8IZ83 802 aa3.25□□□□□ -1.89
RNU6-240P-201ENST00000516098 TRPM4Q8TD43 1214 aa3.25□□□□□ -1.89
RNU6-240P-201ENST00000516098 TSPAN10Q9H1Z9 355 aaPredicted RBP3.25□□□□□ -1.89
RNU6-240P-201ENST00000516098 TGFBR3LH3BV60 316 aa3.24□□□□□ -1.89
RNU6-240P-201ENST00000516098 PIK3CDO00329 1044 aa3.24□□□□□ -1.89
RNU6-240P-201ENST00000516098 DHX15O43143 795 aaKnown RBP3.24□□□□□ -1.89
RNU6-240P-201ENST00000516098 TGFB1P01137 390 aa3.24□□□□□ -1.89
RNU6-240P-201ENST00000516098 ABL2P42684 1182 aa3.24□□□□□ -1.89
RNU6-240P-201ENST00000516098 JAG1P78504 1218 aa3.24□□□□□ -1.89
RNU6-240P-201ENST00000516098 UVSSAQ2YD98 709 aa3.24□□□□□ -1.89
RNU6-240P-201ENST00000516098 DHX32Q7L7V1 743 aaKnown RBP3.24□□□□□ -1.89
RNU6-240P-201ENST00000516098 DTX1Q86Y01 620 aa3.24□□□□□ -1.89
RNU6-240P-201ENST00000516098 CACTIN-AS1Q8N1I8 211 aa3.24□□□□□ -1.89
RNU6-240P-201ENST00000516098 TPCN2Q8NHX9 752 aa3.24□□□□□ -1.89
RNU6-240P-201ENST00000516098 GAS2L2Q8NHY3 880 aa3.24□□□□□ -1.89
RNU6-240P-201ENST00000516098 STOML1Q9UBI4 398 aa3.24□□□□□ -1.89
RNU6-240P-201ENST00000516098 USP17L5A8MUK1 530 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms