RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 FAM155AB1AL88 458 aaPredicted RBP12.38□□□□□ -0.43
CSNK1A1-206ENST00000515748 NPHP1O15259 732 aa12.38□□□□□ -0.43
CSNK1A1-206ENST00000515748 CANXP27824 592 aaKnown RBP12.38□□□□□ -0.43
CSNK1A1-206ENST00000515748 HUNKP57058 714 aa12.38□□□□□ -0.43
CSNK1A1-206ENST00000515748 CEMIPQ8WUJ3 1361 aa12.38□□□□□ -0.43
CSNK1A1-206ENST00000515748 SZT2Q5T011 3432 aa12.37□□□□□ -0.43
CSNK1A1-206ENST00000515748 ST5P78524 1137 aa12.37□□□□□ -0.43
CSNK1A1-206ENST00000515748 CNBD1Q8NA66 436 aa12.37□□□□□ -0.43
CSNK1A1-206ENST00000515748 CCDC102AQ96A19 550 aa12.37□□□□□ -0.43
CSNK1A1-206ENST00000515748 SETDB2Q96T68 719 aa12.37□□□□□ -0.43
CSNK1A1-206ENST00000515748 ADARB2Q9NS39 739 aaKnown RBP12.37□□□□□ -0.43
CSNK1A1-206ENST00000515748 PGAP2Q9UHJ9 254 aa12.37□□□□□ -0.43
CSNK1A1-206ENST00000515748 ANKRD31Q8N7Z5 1873 aa12.37□□□□□ -0.43
CSNK1A1-206ENST00000515748 MKI67P46013 3256 aaKnown RBP12.36□□□□□ -0.43
CSNK1A1-206ENST00000515748 A0A087WZG4 1122 aa12.36□□□□□ -0.43
CSNK1A1-206ENST00000515748 GNAT3A8MTJ3 354 aa12.36□□□□□ -0.43
CSNK1A1-206ENST00000515748 HTATSF1O43719 755 aaKnown RBP12.36□□□□□ -0.43
CSNK1A1-206ENST00000515748 NPR1P16066 1061 aa12.36□□□□□ -0.43
CSNK1A1-206ENST00000515748 EIF5P55010 431 aaKnown RBP12.36□□□□□ -0.43
CSNK1A1-206ENST00000515748 WDR43Q15061 677 aaKnown RBP eCLIP12.36□□□□□ -0.43
CSNK1A1-206ENST00000515748 RGMBQ6NW40 437 aa12.36□□□□□ -0.43
CSNK1A1-206ENST00000515748 CSRNP1Q96S65 589 aa12.36□□□□□ -0.43
CSNK1A1-206ENST00000515748 HDAC9Q9UKV0 1011 aa12.36□□□□□ -0.43
CSNK1A1-206ENST00000515748 RNMTO43148 476 aaKnown RBP12.35□□□□□ -0.43
CSNK1A1-206ENST00000515748 CDC37L1Q7L3B6 337 aa12.35□□□□□ -0.43
CSNK1A1-206ENST00000515748 SLC52A2Q9HAB3 445 aa12.35□□□□□ -0.43
CSNK1A1-206ENST00000515748 MAPK8IP3Q9UPT6 1336 aa12.35□□□□□ -0.43
CSNK1A1-206ENST00000515748 TJP1Q07157 1748 aa12.34□□□□□ -0.43
CSNK1A1-206ENST00000515748 NEFMP07197 916 aa12.34□□□□□ -0.43
CSNK1A1-206ENST00000515748 NFE2L2Q16236 605 aa12.34□□□□□ -0.43
CSNK1A1-206ENST00000515748 PNISRQ8TF01 805 aaKnown RBP12.34□□□□□ -0.43
CSNK1A1-206ENST00000515748 PSMD1Q99460 953 aa12.34□□□□□ -0.43
CSNK1A1-206ENST00000515748 GPRC5DQ9NZD1 345 aa12.34□□□□□ -0.43
CSNK1A1-206ENST00000515748 ADAMTS8Q9UP79 889 aa12.34□□□□□ -0.43
CSNK1A1-206ENST00000515748 TBC1D2BQ9UPU7 963 aa12.34□□□□□ -0.43
CSNK1A1-206ENST00000515748 COL11A2P13942 1736 aaPredicted RBP12.34□□□□□ -0.43
CSNK1A1-206ENST00000515748 KLRG2A4D1S0 409 aaPredicted RBP12.33□□□□□ -0.44
CSNK1A1-206ENST00000515748 ZNF157P51786 506 aaPredicted RBP12.33□□□□□ -0.44
CSNK1A1-206ENST00000515748 CCDC184Q52MB2 194 aa12.33□□□□□ -0.44
CSNK1A1-206ENST00000515748 ZC3H15Q8WU90 426 aaKnown RBP12.33□□□□□ -0.44
CSNK1A1-206ENST00000515748 LGR6Q9HBX8 967 aa12.33□□□□□ -0.44
CSNK1A1-206ENST00000515748 MRS2Q9HD23 443 aa12.33□□□□□ -0.44
CSNK1A1-206ENST00000515748 CACNA1SQ13698 1873 aa12.33□□□□□ -0.44
CSNK1A1-206ENST00000515748 SCN11AQ9UI33 1791 aa12.33□□□□□ -0.44
CSNK1A1-206ENST00000515748 SLC39A6Q13433 755 aa12.32□□□□□ -0.44
CSNK1A1-206ENST00000515748 FBXO46Q6PJ61 603 aaPredicted RBP12.32□□□□□ -0.44
CSNK1A1-206ENST00000515748 IL17REQ8NFR9 667 aa12.32□□□□□ -0.44
CSNK1A1-206ENST00000515748 RUNDC1Q96C34 613 aa12.32□□□□□ -0.44
CSNK1A1-206ENST00000515748 ALDH1B1P30837 517 aa12.31□□□□□ -0.44
CSNK1A1-206ENST00000515748 HIRAP54198 1017 aaPredicted RBP12.31□□□□□ -0.44
CSNK1A1-206ENST00000515748 DLK2Q6UY11 383 aa12.31□□□□□ -0.44
CSNK1A1-206ENST00000515748 USP48Q86UV5 1035 aa12.31□□□□□ -0.44
CSNK1A1-206ENST00000515748 VSIG10Q8N0Z9 540 aa12.31□□□□□ -0.44
CSNK1A1-206ENST00000515748 LARGE2Q8N3Y3 721 aa12.31□□□□□ -0.44
CSNK1A1-206ENST00000515748 ZNF296Q8WUU4 475 aaPredicted RBP12.31□□□□□ -0.44
CSNK1A1-206ENST00000515748 TRIOBPQ9H2D6 2365 aa12.31□□□□□ -0.44
CSNK1A1-206ENST00000515748 PITPNM2Q9BZ72 1349 aa12.31□□□□□ -0.44
CSNK1A1-206ENST00000515748 POTEFA5A3E0 1075 aa12.3□□□□□ -0.44
CSNK1A1-206ENST00000515748 CCER2I3L3R5 266 aa12.3□□□□□ -0.44
CSNK1A1-206ENST00000515748 STARD3NLO95772 234 aa12.3□□□□□ -0.44
CSNK1A1-206ENST00000515748 C2orf69Q8N8R5 385 aa12.3□□□□□ -0.44
CSNK1A1-206ENST00000515748 RTF1Q92541 710 aaKnown RBP12.3□□□□□ -0.44
CSNK1A1-206ENST00000515748 TMPOP42166 694 aaKnown RBP12.29□□□□□ -0.44
CSNK1A1-206ENST00000515748 MNX1P50219 401 aaPredicted RBP12.29□□□□□ -0.44
CSNK1A1-206ENST00000515748 LMOD3Q0VAK6 560 aa12.29□□□□□ -0.44
CSNK1A1-206ENST00000515748 TEFQ10587 303 aa12.29□□□□□ -0.44
CSNK1A1-206ENST00000515748 NCBP3Q53F19 620 aaKnown RBP12.29□□□□□ -0.44
CSNK1A1-206ENST00000515748 REM2Q8IYK8 340 aaPredicted RBP12.29□□□□□ -0.44
CSNK1A1-206ENST00000515748 GBA2Q9HCG7 927 aaPredicted RBP12.29□□□□□ -0.44
CSNK1A1-206ENST00000515748 TBC1D8O95759 1140 aa12.28□□□□□ -0.44
CSNK1A1-206ENST00000515748 DIEXFQ68CQ4 756 aaKnown RBP12.28□□□□□ -0.44
CSNK1A1-206ENST00000515748 MCM10Q7L590 875 aa12.28□□□□□ -0.44
CSNK1A1-206ENST00000515748 NBPF5PQ86XG9 351 aaPredicted RBP12.28□□□□□ -0.44
CSNK1A1-206ENST00000515748 OTUD5Q96G74 571 aa12.28□□□□□ -0.44
CSNK1A1-206ENST00000515748 ZNF330Q9Y3S2 320 aaPredicted RBP12.28□□□□□ -0.44
CSNK1A1-206ENST00000515748 SIPA1L3O60292 1781 aaPredicted RBP12.28□□□□□ -0.44
CSNK1A1-206ENST00000515748 COL4A5P29400 1685 aa12.27□□□□□ -0.45
CSNK1A1-206ENST00000515748 CAMTA2O94983 1202 aa12.27□□□□□ -0.45
CSNK1A1-206ENST00000515748 SLC10A3P09131 477 aa12.27□□□□□ -0.45
CSNK1A1-206ENST00000515748 GMPSP49915 693 aaPredicted RBP12.27□□□□□ -0.45
CSNK1A1-206ENST00000515748 RIPK4P57078 832 aa12.27□□□□□ -0.45
CSNK1A1-206ENST00000515748 INTS3Q68E01 1043 aaKnown RBP12.27□□□□□ -0.45
CSNK1A1-206ENST00000515748 CC2D2BQ6DHV5 1058 aa12.27□□□□□ -0.45
CSNK1A1-206ENST00000515748 NIM1KQ8IY84 436 aa12.27□□□□□ -0.45
CSNK1A1-206ENST00000515748 CCDC146Q8IYE0 955 aa12.27□□□□□ -0.45
CSNK1A1-206ENST00000515748 COL6A3P12111 3177 aa12.27□□□□□ -0.45
CSNK1A1-206ENST00000515748 UBR2Q8IWV8 1755 aa12.26□□□□□ -0.45
CSNK1A1-206ENST00000515748 ARFGEF2Q9Y6D5 1785 aa12.26□□□□□ -0.45
CSNK1A1-206ENST00000515748 CXCL9Q07325 125 aa12.26□□□□□ -0.45
CSNK1A1-206ENST00000515748 ZNF790Q6PG37 636 aa12.26□□□□□ -0.45
CSNK1A1-206ENST00000515748 BABAM1Q9NWV8 329 aa12.26□□□□□ -0.45
CSNK1A1-206ENST00000515748 GPR25O00155 361 aa12.25□□□□□ -0.45
CSNK1A1-206ENST00000515748 IL6STP40189 918 aaPredicted RBP12.25□□□□□ -0.45
CSNK1A1-206ENST00000515748 DCTN1Q14203 1278 aa12.25□□□□□ -0.45
CSNK1A1-206ENST00000515748 GRIPAP1Q4V328 841 aa12.25□□□□□ -0.45
CSNK1A1-206ENST00000515748 TPTE2Q6XPS3 522 aa12.25□□□□□ -0.45
CSNK1A1-206ENST00000515748 TRPM4Q8TD43 1214 aa12.25□□□□□ -0.45
CSNK1A1-206ENST00000515748 TRIM35Q9UPQ4 493 aa12.25□□□□□ -0.45
CSNK1A1-206ENST00000515748 AKAP11Q9UKA4 1901 aa12.25□□□□□ -0.45
CSNK1A1-206ENST00000515748 BTBD11A6QL63 1104 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms