RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 IFFO2Q5TF58 517 aa12.61□□□□□ -0.39
SNF8-214ENST00000515174 ASAP1Q9ULH1 1129 aa12.61□□□□□ -0.39
SNF8-214ENST00000515174 UBR3Q6ZT12 1888 aa12.61□□□□□ -0.39
SNF8-214ENST00000515174 PALLDQ8WX93 1383 aa12.6□□□□□ -0.39
SNF8-214ENST00000515174 STARD3NLO95772 234 aa12.6□□□□□ -0.39
SNF8-214ENST00000515174 AIMP1Q12904 312 aaKnown RBP12.6□□□□□ -0.39
SNF8-214ENST00000515174 KIF1BPQ96EK5 621 aa12.6□□□□□ -0.39
SNF8-214ENST00000515174 SRGAP3O43295 1099 aa12.59□□□□□ -0.39
SNF8-214ENST00000515174 PDE1AP54750 535 aa12.59□□□□□ -0.39
SNF8-214ENST00000515174 CWF19L2Q2TBE0 894 aaKnown RBP12.59□□□□□ -0.39
SNF8-214ENST00000515174 RABL6Q3YEC7 729 aaPredicted RBP12.59□□□□□ -0.39
SNF8-214ENST00000515174 ERC1Q8IUD2 1116 aa12.59□□□□□ -0.39
SNF8-214ENST00000515174 C16orf71Q8IYS4 520 aaPredicted RBP12.59□□□□□ -0.39
SNF8-214ENST00000515174 KAZALD1Q96I82 304 aa12.59□□□□□ -0.39
SNF8-214ENST00000515174 NUP98P52948 1817 aa12.58□□□□□ -0.4
SNF8-214ENST00000515174 H7C1W4 665 aa12.58□□□□□ -0.4
SNF8-214ENST00000515174 PTCD1O75127 700 aaKnown RBP12.58□□□□□ -0.4
SNF8-214ENST00000515174 CDC45O75419 566 aa12.58□□□□□ -0.4
SNF8-214ENST00000515174 SURF6O75683 361 aaKnown RBP12.58□□□□□ -0.4
SNF8-214ENST00000515174 GSPT1P15170 499 aaKnown RBP12.58□□□□□ -0.4
SNF8-214ENST00000515174 RBM25P49756 843 aaKnown RBP12.58□□□□□ -0.4
SNF8-214ENST00000515174 CCDC191Q8NCU4 936 aa12.58□□□□□ -0.4
SNF8-214ENST00000515174 MYD88Q99836 296 aa12.58□□□□□ -0.4
SNF8-214ENST00000515174 SGIP1Q9BQI5 828 aa12.58□□□□□ -0.4
SNF8-214ENST00000515174 EXOC6BQ9Y2D4 811 aa12.58□□□□□ -0.4
SNF8-214ENST00000515174 USP42Q9H9J4 1324 aaKnown RBP12.58□□□□□ -0.4
SNF8-214ENST00000515174 CHD4Q14839 1912 aa12.57□□□□□ -0.4
SNF8-214ENST00000515174 A1BGP04217 495 aa12.57□□□□□ -0.4
SNF8-214ENST00000515174 POLD1P28340 1107 aa12.57□□□□□ -0.4
SNF8-214ENST00000515174 CASP7P55210 303 aa12.57□□□□□ -0.4
SNF8-214ENST00000515174 NPM2Q86SE8 214 aaKnown RBP12.57□□□□□ -0.4
SNF8-214ENST00000515174 RHPN1Q8TCX5 695 aa12.57□□□□□ -0.4
SNF8-214ENST00000515174 SUCLG2Q96I99 432 aa12.57□□□□□ -0.4
SNF8-214ENST00000515174 SMARCA5O60264 1052 aaPredicted RBP12.56□□□□□ -0.4
SNF8-214ENST00000515174 TBC1D9Q6ZT07 1266 aa12.56□□□□□ -0.4
SNF8-214ENST00000515174 SLC4A9Q96Q91 983 aa12.56□□□□□ -0.4
SNF8-214ENST00000515174 RBM42Q9BTD8 480 aaKnown RBP12.56□□□□□ -0.4
SNF8-214ENST00000515174 ISCA1Q9BUE6 129 aa12.56□□□□□ -0.4
SNF8-214ENST00000515174 COPRSQ9NQ92 184 aa12.56□□□□□ -0.4
SNF8-214ENST00000515174 EPB41L2O43491 1005 aaKnown RBP12.55□□□□□ -0.4
SNF8-214ENST00000515174 CYP19A1P11511 503 aaPredicted RBP12.55□□□□□ -0.4
SNF8-214ENST00000515174 SDSP20132 328 aa12.55□□□□□ -0.4
SNF8-214ENST00000515174 MX1P20591 662 aa12.55□□□□□ -0.4
SNF8-214ENST00000515174 PIP4K2AP48426 406 aaPredicted RBP12.55□□□□□ -0.4
SNF8-214ENST00000515174 TCIRG1Q13488 830 aa12.55□□□□□ -0.4
SNF8-214ENST00000515174 DNAJC10Q8IXB1 793 aa12.55□□□□□ -0.4
SNF8-214ENST00000515174 OTUD7AQ8TE49 926 aaPredicted RBP12.55□□□□□ -0.4
SNF8-214ENST00000515174 SMARCC1Q92922 1105 aaPredicted RBP12.55□□□□□ -0.4
SNF8-214ENST00000515174 C22orf23Q9BZE7 217 aa12.55□□□□□ -0.4
SNF8-214ENST00000515174 BICC1Q9H694 974 aaKnown RBP12.55□□□□□ -0.4
SNF8-214ENST00000515174 CWC25Q9NXE8 425 aaPredicted RBP12.55□□□□□ -0.4
SNF8-214ENST00000515174 ERVV-1B6SEH8 477 aa12.54□□□□□ -0.4
SNF8-214ENST00000515174 IL6STP40189 918 aaPredicted RBP12.54□□□□□ -0.4
SNF8-214ENST00000515174 HSP90AB3PQ58FF7 597 aa12.54□□□□□ -0.4
SNF8-214ENST00000515174 TTLL7Q6ZT98 887 aa12.54□□□□□ -0.4
SNF8-214ENST00000515174 TTC41PQ6P2S7 1318 aa12.54□□□□□ -0.4
SNF8-214ENST00000515174 QSER1Q2KHR3 1735 aa12.54□□□□□ -0.4
SNF8-214ENST00000515174 A0A087WZG4 1122 aa12.53□□□□□ -0.4
SNF8-214ENST00000515174 RGL2O15211 777 aa12.53□□□□□ -0.4
SNF8-214ENST00000515174 ZNF827Q17R98 1081 aa12.53□□□□□ -0.4
SNF8-214ENST00000515174 CASC1Q6TDU7 716 aa12.53□□□□□ -0.4
SNF8-214ENST00000515174 IL27Q8NEV9 243 aa12.53□□□□□ -0.4
SNF8-214ENST00000515174 LAMB2P55268 1798 aa12.53□□□□□ -0.4
SNF8-214ENST00000515174 COL24A1Q17RW2 1714 aa12.52□□□□□ -0.41
SNF8-214ENST00000515174 LOC102724428A0A0B4J2F2 783 aa12.52□□□□□ -0.41
SNF8-214ENST00000515174 RFX5P48382 616 aaPredicted RBP12.52□□□□□ -0.41
SNF8-214ENST00000515174 SIK1P57059 783 aa12.52□□□□□ -0.41
SNF8-214ENST00000515174 G3BP1Q13283 466 aaKnown RBP eCLIP12.52□□□□□ -0.41
SNF8-214ENST00000515174 ITPK1Q13572 414 aa12.52□□□□□ -0.41
SNF8-214ENST00000515174 BECN1Q14457 450 aa12.52□□□□□ -0.41
SNF8-214ENST00000515174 GIGYF2Q6Y7W6 1299 aaKnown RBP12.52□□□□□ -0.41
SNF8-214ENST00000515174 CLASRPQ8N2M8 674 aaKnown RBP12.52□□□□□ -0.41
SNF8-214ENST00000515174 SLC16A10Q8TF71 515 aa12.52□□□□□ -0.41
SNF8-214ENST00000515174 PLA2G12BQ9BX93 195 aa12.52□□□□□ -0.41
SNF8-214ENST00000515174 TFCP2L1Q9NZI6 479 aa12.52□□□□□ -0.41
SNF8-214ENST00000515174 FBXO3Q9UK99 471 aa12.52□□□□□ -0.41
SNF8-214ENST00000515174 MAP3K15Q6ZN16 1313 aa12.52□□□□□ -0.41
SNF8-214ENST00000515174 APBB1O00213 710 aa12.51□□□□□ -0.41
SNF8-214ENST00000515174 EPHA10Q5JZY3 1008 aa12.51□□□□□ -0.41
SNF8-214ENST00000515174 KIF6Q6ZMV9 814 aa12.51□□□□□ -0.41
SNF8-214ENST00000515174 ATP5J2-PTCD1G3V325 749 aa12.5□□□□□ -0.41
SNF8-214ENST00000515174 ERC2O15083 957 aa12.5□□□□□ -0.41
SNF8-214ENST00000515174 GRIN3BO60391 1043 aa12.5□□□□□ -0.41
SNF8-214ENST00000515174 GLRX3O76003 335 aaKnown RBP12.5□□□□□ -0.41
SNF8-214ENST00000515174 SASH1O94885 1247 aa12.5□□□□□ -0.41
SNF8-214ENST00000515174 PCCAP05165 728 aaPredicted RBP12.5□□□□□ -0.41
SNF8-214ENST00000515174 EIF5P55010 431 aaKnown RBP12.5□□□□□ -0.41
SNF8-214ENST00000515174 MFAP1P55081 439 aaKnown RBP12.5□□□□□ -0.41
SNF8-214ENST00000515174 FOXO4P98177 505 aa12.5□□□□□ -0.41
SNF8-214ENST00000515174 PTPN12Q05209 780 aaKnown RBP12.5□□□□□ -0.41
SNF8-214ENST00000515174 UBE3BQ7Z3V4 1068 aa12.5□□□□□ -0.41
SNF8-214ENST00000515174 TICAM2Q86XR7 235 aa12.5□□□□□ -0.41
SNF8-214ENST00000515174 PI4K2BQ8TCG2 481 aa12.5□□□□□ -0.41
SNF8-214ENST00000515174 SNX21Q969T3 373 aa12.5□□□□□ -0.41
SNF8-214ENST00000515174 LRRC4BQ9NT99 713 aa12.5□□□□□ -0.41
SNF8-214ENST00000515174 ZBTB1Q9Y2K1 713 aa12.5□□□□□ -0.41
SNF8-214ENST00000515174 MYH3P11055 1940 aa12.5□□□□□ -0.41
SNF8-214ENST00000515174 CDHR2Q9BYE9 1310 aa12.49□□□□□ -0.41
SNF8-214ENST00000515174 REC8O95072 547 aa12.49□□□□□ -0.41
SNF8-214ENST00000515174 ATP6V1AP38606 617 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms