RNA–Protein interactions for RNA: ENST00000514384.1

SMIM20-202, Transcript of small integral membrane protein 20, humanhuman

TSL 5 BASIC

Gene SMIM20, Length 774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-202ENST00000514384 EXOC6Q8TAG9 804 aa9.34□□□□□ -0.91
SMIM20-202ENST00000514384 DCAF11Q8TEB1 546 aa9.34□□□□□ -0.91
SMIM20-202ENST00000514384 DDX21Q9NR30 783 aaKnown RBP eCLIP9.34□□□□□ -0.91
SMIM20-202ENST00000514384 HPS5Q9UPZ3 1129 aa9.34□□□□□ -0.91
SMIM20-202ENST00000514384 TTC21BQ7Z4L5 1316 aa9.33□□□□□ -0.92
SMIM20-202ENST00000514384 IQCA1LA6NCM1 817 aa9.33□□□□□ -0.92
SMIM20-202ENST00000514384 NGEFQ8N5V2 710 aa9.33□□□□□ -0.92
SMIM20-202ENST00000514384 ARHGEF1Q92888 912 aaKnown RBP9.33□□□□□ -0.92
SMIM20-202ENST00000514384 ZIC5Q96T25 663 aa9.33□□□□□ -0.92
SMIM20-202ENST00000514384 CCDC88AQ3V6T2 1871 aa9.32□□□□□ -0.92
SMIM20-202ENST00000514384 LOC102724428A0A0B4J2F2 783 aa9.32□□□□□ -0.92
SMIM20-202ENST00000514384 HMGB2P26583 209 aaKnown RBP9.32□□□□□ -0.92
SMIM20-202ENST00000514384 SIK1P57059 783 aa9.32□□□□□ -0.92
SMIM20-202ENST00000514384 LSM11P83369 360 aaKnown RBP eCLIP9.32□□□□□ -0.92
SMIM20-202ENST00000514384 LHX6Q9UPM6 363 aa9.32□□□□□ -0.92
SMIM20-202ENST00000514384 TRAF5O00463 557 aa9.31□□□□□ -0.92
SMIM20-202ENST00000514384 PPP1R37O75864 691 aa9.31□□□□□ -0.92
SMIM20-202ENST00000514384 ATP6V1AP38606 617 aa9.31□□□□□ -0.92
SMIM20-202ENST00000514384 BRPF1P55201 1214 aaPredicted RBP9.31□□□□□ -0.92
SMIM20-202ENST00000514384 CST9Q5W186 159 aa9.31□□□□□ -0.92
SMIM20-202ENST00000514384 SMARCC1Q92922 1105 aaPredicted RBP9.31□□□□□ -0.92
SMIM20-202ENST00000514384 KDM2AQ9Y2K7 1162 aa9.31□□□□□ -0.92
SMIM20-202ENST00000514384 RTCBQ9Y3I0 505 aaKnown RBP9.31□□□□□ -0.92
SMIM20-202ENST00000514384 ZNF521Q96K83 1311 aa9.31□□□□□ -0.92
SMIM20-202ENST00000514384 EPHX2P34913 555 aa9.3□□□□□ -0.92
SMIM20-202ENST00000514384 RFC4P35249 363 aa9.3□□□□□ -0.92
SMIM20-202ENST00000514384 CDCA8Q53HL2 280 aa9.3□□□□□ -0.92
SMIM20-202ENST00000514384 CENPQQ7L2Z9 268 aaPredicted RBP9.3□□□□□ -0.92
SMIM20-202ENST00000514384 PLPP6Q8IY26 295 aa9.3□□□□□ -0.92
SMIM20-202ENST00000514384 PIGBQ92521 554 aa9.3□□□□□ -0.92
SMIM20-202ENST00000514384 POLR3GLQ9BT43 218 aa9.3□□□□□ -0.92
SMIM20-202ENST00000514384 COL25A1Q9BXS0 654 aaPredicted RBP9.3□□□□□ -0.92
SMIM20-202ENST00000514384 SRP68Q9UHB9 627 aaKnown RBP9.3□□□□□ -0.92
SMIM20-202ENST00000514384 TLL2Q9Y6L7 1015 aa9.3□□□□□ -0.92
SMIM20-202ENST00000514384 FOXK1P85037 733 aa9.29□□□□□ -0.92
SMIM20-202ENST00000514384 TTLL6Q8N841 843 aa9.29□□□□□ -0.92
SMIM20-202ENST00000514384 GPHNQ9NQX3 736 aaPredicted RBP9.29□□□□□ -0.92
SMIM20-202ENST00000514384 HACL1Q9UJ83 578 aa9.29□□□□□ -0.92
SMIM20-202ENST00000514384 MKI67P46013 3256 aaKnown RBP9.29□□□□□ -0.92
SMIM20-202ENST00000514384 COL6A3P12111 3177 aa9.28□□□□□ -0.92
SMIM20-202ENST00000514384 C21orf2O43822 256 aa9.28□□□□□ -0.92
SMIM20-202ENST00000514384 NBR1Q14596 966 aa9.28□□□□□ -0.92
SMIM20-202ENST00000514384 PPP4R3BQ5MIZ7 849 aa9.28□□□□□ -0.92
SMIM20-202ENST00000514384 CTU1Q7Z7A3 348 aaKnown RBP9.28□□□□□ -0.92
SMIM20-202ENST00000514384 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.28□□□□□ -0.92
SMIM20-202ENST00000514384 TRMT2AQ8IZ69 625 aaKnown RBP9.27□□□□□ -0.93
SMIM20-202ENST00000514384 USHBP1Q8N6Y0 703 aa9.27□□□□□ -0.93
SMIM20-202ENST00000514384 ZNF541Q9H0D2 1346 aa9.27□□□□□ -0.93
SMIM20-202ENST00000514384 ADAMTSL1Q8N6G6 1762 aa9.27□□□□□ -0.93
SMIM20-202ENST00000514384 POLRMTO00411 1230 aaKnown RBP9.26□□□□□ -0.93
SMIM20-202ENST00000514384 ARHGAP33O14559 1287 aa9.26□□□□□ -0.93
SMIM20-202ENST00000514384 C2CD5Q86YS7 1000 aa9.26□□□□□ -0.93
SMIM20-202ENST00000514384 PTCD2Q8WV60 388 aaKnown RBP9.26□□□□□ -0.93
SMIM20-202ENST00000514384 PANK3Q9H999 370 aa9.26□□□□□ -0.93
SMIM20-202ENST00000514384 ASAP1Q9ULH1 1129 aa9.26□□□□□ -0.93
SMIM20-202ENST00000514384 AAMPQ13685 434 aa9.25□□□□□ -0.93
SMIM20-202ENST00000514384 SAPCD2Q86UD0 394 aa9.25□□□□□ -0.93
SMIM20-202ENST00000514384 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.25□□□□□ -0.93
SMIM20-202ENST00000514384 CDCA7LQ96GN5 454 aa9.25□□□□□ -0.93
SMIM20-202ENST00000514384 CRBNQ96SW2 442 aa9.25□□□□□ -0.93
SMIM20-202ENST00000514384 MAP2P11137 1827 aaKnown RBP9.24□□□□□ -0.93
SMIM20-202ENST00000514384 TRPA1O75762 1119 aa9.24□□□□□ -0.93
SMIM20-202ENST00000514384 DUSP27Q5VZP5 1158 aa9.24□□□□□ -0.93
SMIM20-202ENST00000514384 PNMA8AQ86V59 439 aaPredicted RBP9.24□□□□□ -0.93
SMIM20-202ENST00000514384 NME9Q86XW9 330 aa9.24□□□□□ -0.93
SMIM20-202ENST00000514384 TAOK3Q9H2K8 898 aa9.24□□□□□ -0.93
SMIM20-202ENST00000514384 RAPGEFL1Q9UHV5 662 aa9.24□□□□□ -0.93
SMIM20-202ENST00000514384 TRIOBPQ9H2D6 2365 aa9.24□□□□□ -0.93
SMIM20-202ENST00000514384 NEFMP07197 916 aa9.23□□□□□ -0.93
SMIM20-202ENST00000514384 PPP2R1AP30153 589 aa9.23□□□□□ -0.93
SMIM20-202ENST00000514384 BICDL1Q6ZP65 573 aa9.23□□□□□ -0.93
SMIM20-202ENST00000514384 SYNE4Q8N205 404 aa9.23□□□□□ -0.93
SMIM20-202ENST00000514384 SCN4AP35499 1836 aa9.23□□□□□ -0.93
SMIM20-202ENST00000514384 TTC21AQ8NDW8 1320 aa9.23□□□□□ -0.93
SMIM20-202ENST00000514384 FAM208AQ9UK61 1670 aaKnown RBP9.23□□□□□ -0.93
SMIM20-202ENST00000514384 LTN1O94822 1766 aa9.22□□□□□ -0.93
SMIM20-202ENST00000514384 CYP27B1O15528 508 aa9.22□□□□□ -0.93
SMIM20-202ENST00000514384 CELF2O95319 508 aaKnown RBP9.22□□□□□ -0.93
SMIM20-202ENST00000514384 SLFN5Q08AF3 891 aa9.22□□□□□ -0.93
SMIM20-202ENST00000514384 IP6K1Q92551 441 aa9.22□□□□□ -0.93
SMIM20-202ENST00000514384 ZNF622Q969S3 477 aaKnown RBP eCLIP9.22□□□□□ -0.93
SMIM20-202ENST00000514384 SLC4A9Q96Q91 983 aa9.22□□□□□ -0.93
SMIM20-202ENST00000514384 RNF186Q9NXI6 227 aa9.22□□□□□ -0.93
SMIM20-202ENST00000514384 SBNO2Q9Y2G9 1366 aa9.22□□□□□ -0.93
SMIM20-202ENST00000514384 RPS6KA4O75676 772 aa9.21□□□□□ -0.94
SMIM20-202ENST00000514384 PRKCSHP14314 528 aaPredicted RBP9.21□□□□□ -0.94
SMIM20-202ENST00000514384 TM4SF1P30408 202 aa9.21□□□□□ -0.94
SMIM20-202ENST00000514384 DSG2Q14126 1118 aa9.21□□□□□ -0.94
SMIM20-202ENST00000514384 ZNF408Q9H9D4 720 aa9.21□□□□□ -0.94
SMIM20-202ENST00000514384 ADAMTS8Q9UP79 889 aa9.21□□□□□ -0.94
SMIM20-202ENST00000514384 KNSTRNQ9Y448 316 aa9.21□□□□□ -0.94
SMIM20-202ENST00000514384 CARMIL3Q8ND23 1372 aa9.21□□□□□ -0.94
SMIM20-202ENST00000514384 H0YGN5 161 aa9.2□□□□□ -0.94
SMIM20-202ENST00000514384 H0YIN7 160 aa9.2□□□□□ -0.94
SMIM20-202ENST00000514384 COL9A1P20849 921 aa9.2□□□□□ -0.94
SMIM20-202ENST00000514384 PDE3AQ14432 1141 aa9.2□□□□□ -0.94
SMIM20-202ENST00000514384 WDR43Q15061 677 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMIM20-202ENST00000514384 AKAP4Q5JQC9 854 aa9.2□□□□□ -0.94
SMIM20-202ENST00000514384 CC2D1BQ5T0F9 858 aaKnown RBP9.2□□□□□ -0.94
SMIM20-202ENST00000514384 NBPF6Q5VWK0 638 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms