RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 CHADLQ6NUI6 762 aa16.03■□□□□ 0.16
SNHG4-208ENST00000514110 C3orf67Q6ZVT6 689 aa16.03■□□□□ 0.16
SNHG4-208ENST00000514110 SLC51AQ86UW1 340 aa16.03■□□□□ 0.16
SNHG4-208ENST00000514110 NECTIN2Q92692 538 aa16.03■□□□□ 0.16
SNHG4-208ENST00000514110 RPGRQ92834 1020 aaKnown RBP16.03■□□□□ 0.16
SNHG4-208ENST00000514110 PCNTO95613 3336 aa16.03■□□□□ 0.16
SNHG4-208ENST00000514110 PSMD1Q99460 953 aa16.02■□□□□ 0.16
SNHG4-208ENST00000514110 TAF1DQ9H5J8 278 aaPredicted RBP16.02■□□□□ 0.16
SNHG4-208ENST00000514110 SCN4AP35499 1836 aa16.01■□□□□ 0.15
SNHG4-208ENST00000514110 IQCA1LA6NCM1 817 aa16.01■□□□□ 0.15
SNHG4-208ENST00000514110 FZD9O00144 591 aa16.01■□□□□ 0.15
SNHG4-208ENST00000514110 KRT24Q2M2I5 525 aa16.01■□□□□ 0.15
SNHG4-208ENST00000514110 PPP1R42Q7Z4L9 355 aa16.01■□□□□ 0.15
SNHG4-208ENST00000514110 TRIM35Q9UPQ4 493 aa16.01■□□□□ 0.15
SNHG4-208ENST00000514110 COL4A5P29400 1685 aa16.01■□□□□ 0.15
SNHG4-208ENST00000514110 CHL1O00533 1208 aa16■□□□□ 0.15
SNHG4-208ENST00000514110 PARP10Q53GL7 1025 aa16■□□□□ 0.15
SNHG4-208ENST00000514110 CC2D2BQ6DHV5 1058 aa16■□□□□ 0.15
SNHG4-208ENST00000514110 COPS6Q7L5N1 327 aa16■□□□□ 0.15
SNHG4-208ENST00000514110 RUNDC1Q96C34 613 aa16■□□□□ 0.15
SNHG4-208ENST00000514110 RBM17Q96I25 401 aaKnown RBP16■□□□□ 0.15
SNHG4-208ENST00000514110 CRAMP1Q96RY5 1269 aa16■□□□□ 0.15
SNHG4-208ENST00000514110 TCERG1O14776 1098 aaKnown RBP15.99■□□□□ 0.15
SNHG4-208ENST00000514110 PPEF1O14829 653 aaPredicted RBP15.99■□□□□ 0.15
SNHG4-208ENST00000514110 AIMP1Q12904 312 aaKnown RBP15.99■□□□□ 0.15
SNHG4-208ENST00000514110 LDHDQ86WU2 507 aa15.99■□□□□ 0.15
SNHG4-208ENST00000514110 XAGE3Q8WTP9 111 aa15.99■□□□□ 0.15
SNHG4-208ENST00000514110 UTP14AQ9BVJ6 771 aaKnown RBP15.99■□□□□ 0.15
SNHG4-208ENST00000514110 HACL1Q9UJ83 578 aa15.99■□□□□ 0.15
SNHG4-208ENST00000514110 ADAMTS8Q9UP79 889 aa15.99■□□□□ 0.15
SNHG4-208ENST00000514110 ANKRD36CQ5JPF3 1778 aa15.98■□□□□ 0.15
SNHG4-208ENST00000514110 WDR43Q15061 677 aaKnown RBP eCLIP15.98■□□□□ 0.15
SNHG4-208ENST00000514110 EAPPQ56P03 285 aaPredicted RBP15.98■□□□□ 0.15
SNHG4-208ENST00000514110 SLC10A5Q5PT55 438 aa15.98■□□□□ 0.15
SNHG4-208ENST00000514110 NLRP3Q96P20 1036 aa15.98■□□□□ 0.15
SNHG4-208ENST00000514110 LAS1LQ9Y4W2 734 aaKnown RBP15.98■□□□□ 0.15
SNHG4-208ENST00000514110 RNF123Q5XPI4 1314 aa15.97■□□□□ 0.15
SNHG4-208ENST00000514110 EPHX2P34913 555 aa15.97■□□□□ 0.15
SNHG4-208ENST00000514110 COL13A1Q5TAT6 717 aaPredicted RBP15.97■□□□□ 0.15
SNHG4-208ENST00000514110 NLRP10Q86W26 655 aa15.97■□□□□ 0.15
SNHG4-208ENST00000514110 JDP2Q8WYK2 163 aa15.97■□□□□ 0.15
SNHG4-208ENST00000514110 DDX21Q9NR30 783 aaKnown RBP eCLIP15.97■□□□□ 0.15
SNHG4-208ENST00000514110 CREBZFQ9NS37 354 aa15.97■□□□□ 0.15
SNHG4-208ENST00000514110 ADAMTSL1Q8N6G6 1762 aa15.97■□□□□ 0.15
SNHG4-208ENST00000514110 PASKQ96RG2 1323 aa15.96■□□□□ 0.15
SNHG4-208ENST00000514110 GRIPAP1Q4V328 841 aa15.96■□□□□ 0.15
SNHG4-208ENST00000514110 GPC2Q8N158 579 aa15.96■□□□□ 0.15
SNHG4-208ENST00000514110 LAMB2P55268 1798 aa15.95■□□□□ 0.14
SNHG4-208ENST00000514110 ITGBL1O95965 494 aaPredicted RBP15.95■□□□□ 0.14
SNHG4-208ENST00000514110 TCIRG1Q13488 830 aa15.95■□□□□ 0.14
SNHG4-208ENST00000514110 HSP90AB3PQ58FF7 597 aa15.95■□□□□ 0.14
SNHG4-208ENST00000514110 CHPF2Q9P2E5 772 aa15.95■□□□□ 0.14
SNHG4-208ENST00000514110 MKRN1Q9UHC7 482 aaKnown RBP15.95■□□□□ 0.14
SNHG4-208ENST00000514110 CLEC11AQ9Y240 323 aa15.95■□□□□ 0.14
SNHG4-208ENST00000514110 ABCC4O15439 1325 aa15.94■□□□□ 0.14
SNHG4-208ENST00000514110 LTBP1Q14766 1721 aa15.94■□□□□ 0.14
SNHG4-208ENST00000514110 HSPA1AP0DMV8 641 aaKnown RBP15.94■□□□□ 0.14
SNHG4-208ENST00000514110 HSPA1BP0DMV9 641 aaKnown RBP15.94■□□□□ 0.14
SNHG4-208ENST00000514110 HCLS1P14317 486 aaPredicted RBP15.94■□□□□ 0.14
SNHG4-208ENST00000514110 EIF6P56537 245 aaKnown RBP15.94■□□□□ 0.14
SNHG4-208ENST00000514110 LARGE2Q8N3Y3 721 aa15.94■□□□□ 0.14
SNHG4-208ENST00000514110 ZNF428Q96B54 188 aa15.94■□□□□ 0.14
SNHG4-208ENST00000514110 PRKRIP1Q9H875 184 aaPredicted RBP15.94■□□□□ 0.14
SNHG4-208ENST00000514110 ATP6V0A2Q9Y487 856 aa15.94■□□□□ 0.14
SNHG4-208ENST00000514110 GJA3Q9Y6H8 435 aa15.94■□□□□ 0.14
SNHG4-208ENST00000514110 HDGFL1Q5TGJ6 251 aa15.93■□□□□ 0.14
SNHG4-208ENST00000514110 TRMT112Q9UI30 125 aaKnown RBP15.93■□□□□ 0.14
SNHG4-208ENST00000514110 AOC3Q16853 763 aa15.92■□□□□ 0.14
SNHG4-208ENST00000514110 MAP1SQ66K74 1059 aaPredicted RBP15.92■□□□□ 0.14
SNHG4-208ENST00000514110 PNMA8AQ86V59 439 aaPredicted RBP15.92■□□□□ 0.14
SNHG4-208ENST00000514110 CFAP44Q96MT7 982 aa15.92■□□□□ 0.14
SNHG4-208ENST00000514110 CNTNAP1P78357 1384 aa15.91■□□□□ 0.14
SNHG4-208ENST00000514110 PPIP5K2O43314 1243 aa15.91■□□□□ 0.14
SNHG4-208ENST00000514110 HOXB7P09629 217 aa15.91■□□□□ 0.14
SNHG4-208ENST00000514110 SCNN1DP51172 638 aa15.91■□□□□ 0.14
SNHG4-208ENST00000514110 DUSP27Q5VZP5 1158 aa15.91■□□□□ 0.14
SNHG4-208ENST00000514110 NIM1KQ8IY84 436 aa15.91■□□□□ 0.14
SNHG4-208ENST00000514110 PLBD2Q8NHP8 589 aa15.91■□□□□ 0.14
SNHG4-208ENST00000514110 MBIPQ9NS73 344 aa15.91■□□□□ 0.14
SNHG4-208ENST00000514110 SH3TC1Q8TE82 1336 aa15.91■□□□□ 0.14
SNHG4-208ENST00000514110 TMEM88BA6NKF7 163 aa15.9■□□□□ 0.14
SNHG4-208ENST00000514110 BBOX1O75936 387 aa15.9■□□□□ 0.14
SNHG4-208ENST00000514110 EPS15P42566 896 aa15.9■□□□□ 0.14
SNHG4-208ENST00000514110 ANKRD13DQ6ZTN6 518 aa15.9■□□□□ 0.14
SNHG4-208ENST00000514110 SP8Q8IXZ3 490 aa15.9■□□□□ 0.14
SNHG4-208ENST00000514110 CNTROBQ8N137 903 aa15.9■□□□□ 0.14
SNHG4-208ENST00000514110 RTFDC1Q9BY42 306 aaPredicted RBP15.9■□□□□ 0.14
SNHG4-208ENST00000514110 TMX4Q9H1E5 349 aaPredicted RBP15.9■□□□□ 0.14
SNHG4-208ENST00000514110 DBF4Q9UBU7 674 aaPredicted RBP15.9■□□□□ 0.14
SNHG4-208ENST00000514110 TAF1P21675 1872 aa15.89■□□□□ 0.13
SNHG4-208ENST00000514110 DDX60Q8IY21 1712 aaKnown RBP15.89■□□□□ 0.13
SNHG4-208ENST00000514110 ATP5J2-PTCD1G3V325 749 aa15.89■□□□□ 0.13
SNHG4-208ENST00000514110 APAF1O14727 1248 aa15.89■□□□□ 0.13
SNHG4-208ENST00000514110 ZNF853P0CG23 659 aa15.89■□□□□ 0.13
SNHG4-208ENST00000514110 LMOD1P29536 600 aaPredicted RBP15.89■□□□□ 0.13
SNHG4-208ENST00000514110 DDX46Q7L014 1031 aaKnown RBP15.89■□□□□ 0.13
SNHG4-208ENST00000514110 ISCA1Q9BUE6 129 aa15.89■□□□□ 0.13
SNHG4-208ENST00000514110 VPS33BQ9H267 617 aa15.89■□□□□ 0.13
SNHG4-208ENST00000514110 GRAPQ13588 217 aa15.88■□□□□ 0.13
SNHG4-208ENST00000514110 DPP8Q6V1X1 898 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms