RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 ARSDP51689 593 aa7.29□□□□□ -1.24
NIPBL-207ENST00000513819 COL19A1Q14993 1142 aa7.29□□□□□ -1.24
NIPBL-207ENST00000513819 C8orf34Q49A92 452 aa7.29□□□□□ -1.24
NIPBL-207ENST00000513819 CRISPLD1Q9H336 500 aa7.29□□□□□ -1.24
NIPBL-207ENST00000513819 FAM13BQ9NYF5 915 aa7.29□□□□□ -1.24
NIPBL-207ENST00000513819 KIAA1522Q9P206 1035 aaPredicted RBP7.29□□□□□ -1.24
NIPBL-207ENST00000513819 CMTR1Q8N1G2 835 aaKnown RBP7.28□□□□□ -1.24
NIPBL-207ENST00000513819 PGBD3Q8N328 593 aa7.28□□□□□ -1.24
NIPBL-207ENST00000513819 PIK3R5Q8WYR1 880 aa7.28□□□□□ -1.24
NIPBL-207ENST00000513819 CEP63Q96MT8 703 aa7.28□□□□□ -1.24
NIPBL-207ENST00000513819 GRNP28799 593 aaKnown RBP7.27□□□□□ -1.25
NIPBL-207ENST00000513819 TYRO3Q06418 890 aa7.27□□□□□ -1.25
NIPBL-207ENST00000513819 LAPTM4AQ15012 233 aa7.27□□□□□ -1.25
NIPBL-207ENST00000513819 TTC16Q8NEE8 873 aa7.27□□□□□ -1.25
NIPBL-207ENST00000513819 ALKBH8Q96BT7 664 aaKnown RBP7.27□□□□□ -1.25
NIPBL-207ENST00000513819 WWC3Q9ULE0 1092 aa7.27□□□□□ -1.25
NIPBL-207ENST00000513819 RTCBQ9Y3I0 505 aaKnown RBP7.27□□□□□ -1.25
NIPBL-207ENST00000513819 LDHBP07195 334 aaKnown RBP7.26□□□□□ -1.25
NIPBL-207ENST00000513819 PTSQ03393 145 aa7.26□□□□□ -1.25
NIPBL-207ENST00000513819 ORC1Q13415 861 aa7.26□□□□□ -1.25
NIPBL-207ENST00000513819 TRIP4Q15650 581 aaPredicted RBP7.26□□□□□ -1.25
NIPBL-207ENST00000513819 RIPOR1Q6ZS17 1223 aa7.26□□□□□ -1.25
NIPBL-207ENST00000513819 SETDB2Q96T68 719 aa7.26□□□□□ -1.25
NIPBL-207ENST00000513819 KCNMB2Q9Y691 235 aa7.26□□□□□ -1.25
NIPBL-207ENST00000513819 THBS1P07996 1170 aa7.25□□□□□ -1.25
NIPBL-207ENST00000513819 ZCCHC2Q9C0B9 1178 aaKnown RBP7.25□□□□□ -1.25
NIPBL-207ENST00000513819 BRD7Q9NPI1 651 aa7.25□□□□□ -1.25
NIPBL-207ENST00000513819 RNF19AQ9NV58 838 aa7.25□□□□□ -1.25
NIPBL-207ENST00000513819 PNMA6FA0A0J9YX94 578 aa7.24□□□□□ -1.25
NIPBL-207ENST00000513819 SLC35F4A4IF30 521 aa7.24□□□□□ -1.25
NIPBL-207ENST00000513819 UBAP1LF5GYI3 381 aa7.24□□□□□ -1.25
NIPBL-207ENST00000513819 RPLP1P05386 114 aaKnown RBP7.24□□□□□ -1.25
NIPBL-207ENST00000513819 EFHC2Q5JST6 749 aa7.24□□□□□ -1.25
NIPBL-207ENST00000513819 NLRP8Q86W28 1048 aa7.24□□□□□ -1.25
NIPBL-207ENST00000513819 EPB42P16452 691 aa7.23□□□□□ -1.25
NIPBL-207ENST00000513819 ENOX2Q16206 610 aaKnown RBP7.23□□□□□ -1.25
NIPBL-207ENST00000513819 SAMD5Q5TGI4 173 aa7.23□□□□□ -1.25
NIPBL-207ENST00000513819 ZNF438Q7Z4V0 828 aa7.23□□□□□ -1.25
NIPBL-207ENST00000513819 GMPR2Q9P2T1 348 aaKnown RBP7.23□□□□□ -1.25
NIPBL-207ENST00000513819 FOXD3Q9UJU5 478 aaPredicted RBP7.23□□□□□ -1.25
NIPBL-207ENST00000513819 FNDC3AQ9Y2H6 1198 aaKnown RBP7.23□□□□□ -1.25
NIPBL-207ENST00000513819 DCDC2BA2VCK2 349 aa7.22□□□□□ -1.25
NIPBL-207ENST00000513819 ATXN7O15265 892 aaPredicted RBP7.22□□□□□ -1.25
NIPBL-207ENST00000513819 XYLBO75191 536 aa7.22□□□□□ -1.25
NIPBL-207ENST00000513819 PRPF40AO75400 957 aaKnown RBP7.22□□□□□ -1.25
NIPBL-207ENST00000513819 TNFRSF21O75509 655 aa7.22□□□□□ -1.25
NIPBL-207ENST00000513819 ATP2B2Q01814 1243 aa7.22□□□□□ -1.25
NIPBL-207ENST00000513819 SFSWAPQ12872 951 aaKnown RBP7.22□□□□□ -1.25
NIPBL-207ENST00000513819 CCDC155Q8N6L0 562 aa7.22□□□□□ -1.25
NIPBL-207ENST00000513819 FAM161BQ96MY7 647 aa7.22□□□□□ -1.25
NIPBL-207ENST00000513819 CSRNP1Q96S65 589 aa7.22□□□□□ -1.25
NIPBL-207ENST00000513819 DUSP9Q99956 384 aaKnown RBP7.22□□□□□ -1.25
NIPBL-207ENST00000513819 NUCKS1Q9H1E3 243 aaKnown RBP7.22□□□□□ -1.25
NIPBL-207ENST00000513819 SENP2Q9HC62 589 aa7.22□□□□□ -1.25
NIPBL-207ENST00000513819 CUEDC1Q9NWM3 386 aaPredicted RBP7.22□□□□□ -1.25
NIPBL-207ENST00000513819 TMEM63CQ9P1W3 806 aa7.22□□□□□ -1.25
NIPBL-207ENST00000513819 PARP2Q9UGN5 583 aa7.22□□□□□ -1.25
NIPBL-207ENST00000513819 EIF1AYO14602 144 aaKnown RBP7.21□□□□□ -1.26
NIPBL-207ENST00000513819 KHNYNO15037 678 aaKnown RBP7.21□□□□□ -1.26
NIPBL-207ENST00000513819 UBAP2LQ14157 1087 aaKnown RBP7.21□□□□□ -1.26
NIPBL-207ENST00000513819 DBN1Q16643 649 aa7.21□□□□□ -1.26
NIPBL-207ENST00000513819 PDE12Q6L8Q7 609 aaKnown RBP7.21□□□□□ -1.26
NIPBL-207ENST00000513819 XKR5Q6UX68 686 aa7.21□□□□□ -1.26
NIPBL-207ENST00000513819 KIFC2Q96AC6 838 aa7.21□□□□□ -1.26
NIPBL-207ENST00000513819 TRIM47Q96LD4 638 aa7.21□□□□□ -1.26
NIPBL-207ENST00000513819 CFHR5Q9BXR6 569 aa7.21□□□□□ -1.26
NIPBL-207ENST00000513819 ELP3Q9H9T3 547 aa7.21□□□□□ -1.26
NIPBL-207ENST00000513819 NEFLP07196 543 aa7.2□□□□□ -1.26
NIPBL-207ENST00000513819 FAM157BP0CG42 384 aa7.2□□□□□ -1.26
NIPBL-207ENST00000513819 XPCQ01831 940 aaPredicted RBP7.2□□□□□ -1.26
NIPBL-207ENST00000513819 LBRQ14739 615 aaKnown RBP7.2□□□□□ -1.26
NIPBL-207ENST00000513819 USPL1Q5W0Q7 1092 aa7.2□□□□□ -1.26
NIPBL-207ENST00000513819 FIGNL1Q6PIW4 674 aa7.2□□□□□ -1.26
NIPBL-207ENST00000513819 KCNH4Q9UQ05 1017 aa7.2□□□□□ -1.26
NIPBL-207ENST00000513819 PCDHGC4Q9Y5F7 938 aa7.2□□□□□ -1.26
NIPBL-207ENST00000513819 EFSO43281 561 aa7.19□□□□□ -1.26
NIPBL-207ENST00000513819 CPNE3O75131 537 aaKnown RBP7.19□□□□□ -1.26
NIPBL-207ENST00000513819 SNRPBP14678 240 aaKnown RBP7.19□□□□□ -1.26
NIPBL-207ENST00000513819 GRIN2CQ14957 1233 aa7.19□□□□□ -1.26
NIPBL-207ENST00000513819 ALG1LQ6GMV1 187 aa7.19□□□□□ -1.26
NIPBL-207ENST00000513819 KRT25Q7Z3Z0 450 aa7.19□□□□□ -1.26
NIPBL-207ENST00000513819 SNX29Q8TEQ0 813 aa7.19□□□□□ -1.26
NIPBL-207ENST00000513819 STRN4Q9NRL3 753 aa7.19□□□□□ -1.26
NIPBL-207ENST00000513819 HCN2Q9UL51 889 aa7.19□□□□□ -1.26
NIPBL-207ENST00000513819 H7C1W4 665 aa7.18□□□□□ -1.26
NIPBL-207ENST00000513819 BNIP3LO60238 219 aa7.18□□□□□ -1.26
NIPBL-207ENST00000513819 PHACTR2O75167 634 aa7.18□□□□□ -1.26
NIPBL-207ENST00000513819 SASH3O75995 380 aa7.18□□□□□ -1.26
NIPBL-207ENST00000513819 RECKO95980 971 aa7.18□□□□□ -1.26
NIPBL-207ENST00000513819 EGFRP00533 1210 aa7.18□□□□□ -1.26
NIPBL-207ENST00000513819 MAPTP10636 758 aaKnown RBP7.18□□□□□ -1.26
NIPBL-207ENST00000513819 KCNQ4P56696 695 aa7.18□□□□□ -1.26
NIPBL-207ENST00000513819 FGD1P98174 961 aa7.18□□□□□ -1.26
NIPBL-207ENST00000513819 TNP2Q05952 138 aa7.18□□□□□ -1.26
NIPBL-207ENST00000513819 TSNAXIP1Q2TAA8 658 aa7.18□□□□□ -1.26
NIPBL-207ENST00000513819 NLRP13Q86W25 1043 aa7.18□□□□□ -1.26
NIPBL-207ENST00000513819 TRIM22Q8IYM9 498 aa7.18□□□□□ -1.26
NIPBL-207ENST00000513819 ZNF837Q96EG3 531 aaPredicted RBP7.18□□□□□ -1.26
NIPBL-207ENST00000513819 DNAJC25Q9H1X3 360 aa7.18□□□□□ -1.26
NIPBL-207ENST00000513819 ZFYVE28Q9HCC9 887 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms