RNA–Protein interactions for RNA: ENST00000513060.5

RACK1-230, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 1,651 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-230ENST00000513060 PARP10Q53GL7 1025 aa17.16■□□□□ 0.34
RACK1-230ENST00000513060 SETDB2Q96T68 719 aa17.16■□□□□ 0.34
RACK1-230ENST00000513060 C1orf115Q9H7X2 142 aa17.16■□□□□ 0.34
RACK1-230ENST00000513060 NUP98P52948 1817 aa17.16■□□□□ 0.34
RACK1-230ENST00000513060 FAM177BA6PVY3 158 aa17.15■□□□□ 0.34
RACK1-230ENST00000513060 H7C1W4 665 aa17.15■□□□□ 0.34
RACK1-230ENST00000513060 RTL5Q5HYW3 569 aaPredicted RBP17.15■□□□□ 0.34
RACK1-230ENST00000513060 SUSD4Q5VX71 490 aa17.15■□□□□ 0.34
RACK1-230ENST00000513060 UBE3BQ7Z3V4 1068 aa17.15■□□□□ 0.34
RACK1-230ENST00000513060 TRMT112Q9UI30 125 aaKnown RBP17.15■□□□□ 0.34
RACK1-230ENST00000513060 C4AP0C0L4 1744 aa17.15■□□□□ 0.34
RACK1-230ENST00000513060 UTYO14607 1347 aa17.15■□□□□ 0.34
RACK1-230ENST00000513060 GNAI2P04899 355 aa17.14■□□□□ 0.33
RACK1-230ENST00000513060 ZBTB38Q8NAP3 1195 aaPredicted RBP17.14■□□□□ 0.33
RACK1-230ENST00000513060 NFIXQ14938 502 aa17.13■□□□□ 0.33
RACK1-230ENST00000513060 PPP1R42Q7Z4L9 355 aa17.13■□□□□ 0.33
RACK1-230ENST00000513060 NLGN1Q8N2Q7 840 aa17.13■□□□□ 0.33
RACK1-230ENST00000513060 FAM89AQ96GI7 184 aa17.13■□□□□ 0.33
RACK1-230ENST00000513060 UTP14AQ9BVJ6 771 aaKnown RBP17.13■□□□□ 0.33
RACK1-230ENST00000513060 BCORQ6W2J9 1755 aa17.13■□□□□ 0.33
RACK1-230ENST00000513060 SCN7AQ01118 1682 aa17.13■□□□□ 0.33
RACK1-230ENST00000513060 PCCAP05165 728 aaPredicted RBP17.13■□□□□ 0.33
RACK1-230ENST00000513060 PDGFDQ9GZP0 370 aaPredicted RBP17.13■□□□□ 0.33
RACK1-230ENST00000513060 PCDHB15Q9Y5E8 787 aa17.13■□□□□ 0.33
RACK1-230ENST00000513060 LRRFIP2Q9Y608 721 aaKnown RBP17.13■□□□□ 0.33
RACK1-230ENST00000513060 N4BP2Q86UW6 1770 aaPredicted RBP17.12■□□□□ 0.33
RACK1-230ENST00000513060 TUBGCP6Q96RT7 1819 aa17.12■□□□□ 0.33
RACK1-230ENST00000513060 TM4SF1P30408 202 aa17.12■□□□□ 0.33
RACK1-230ENST00000513060 CASP7P55210 303 aa17.12■□□□□ 0.33
RACK1-230ENST00000513060 SYNE4Q8N205 404 aa17.12■□□□□ 0.33
RACK1-230ENST00000513060 HDAC5Q9UQL6 1122 aa17.12■□□□□ 0.33
RACK1-230ENST00000513060 SUCLG2Q96I99 432 aa17.11■□□□□ 0.33
RACK1-230ENST00000513060 PPP4R2Q9NY27 417 aa17.11■□□□□ 0.33
RACK1-230ENST00000513060 NTSR2O95665 410 aa17.1■□□□□ 0.33
RACK1-230ENST00000513060 MSL1Q68DK7 614 aa17.1■□□□□ 0.33
RACK1-230ENST00000513060 NBPF5PQ86XG9 351 aaPredicted RBP17.1■□□□□ 0.33
RACK1-230ENST00000513060 KAZALD1Q96I82 304 aa17.1■□□□□ 0.33
RACK1-230ENST00000513060 AFDNP55196 1824 aaKnown RBP17.1■□□□□ 0.33
RACK1-230ENST00000513060 R3HDM1Q15032 1099 aaKnown RBP17.1■□□□□ 0.33
RACK1-230ENST00000513060 TPTE2Q6XPS3 522 aa17.1■□□□□ 0.33
RACK1-230ENST00000513060 NUTM1Q86Y26 1132 aa17.1■□□□□ 0.33
RACK1-230ENST00000513060 SH3TC1Q8TE82 1336 aa17.1■□□□□ 0.33
RACK1-230ENST00000513060 ANKRD36CQ5JPF3 1778 aa17.09■□□□□ 0.33
RACK1-230ENST00000513060 IRS4O14654 1257 aaPredicted RBP17.09■□□□□ 0.33
RACK1-230ENST00000513060 GTF2E1P29083 439 aaPredicted RBP17.09■□□□□ 0.33
RACK1-230ENST00000513060 NYXQ9GZU5 481 aa17.09■□□□□ 0.33
RACK1-230ENST00000513060 CARMIL3Q8ND23 1372 aa17.09■□□□□ 0.33
RACK1-230ENST00000513060 DDR1Q08345 913 aa17.08■□□□□ 0.32
RACK1-230ENST00000513060 EPHA10Q5JZY3 1008 aa17.08■□□□□ 0.32
RACK1-230ENST00000513060 CEP85Q6P2H3 762 aa17.08■□□□□ 0.32
RACK1-230ENST00000513060 RPAP2Q8IXW5 612 aaPredicted RBP17.08■□□□□ 0.32
RACK1-230ENST00000513060 BICC1Q9H694 974 aaKnown RBP17.08■□□□□ 0.32
RACK1-230ENST00000513060 CDHR2Q9BYE9 1310 aa17.07■□□□□ 0.32
RACK1-230ENST00000513060 POLRMTO00411 1230 aaKnown RBP17.07■□□□□ 0.32
RACK1-230ENST00000513060 NPHP1O15259 732 aa17.07■□□□□ 0.32
RACK1-230ENST00000513060 ERFEQ4G0M1 354 aa17.07■□□□□ 0.32
RACK1-230ENST00000513060 SLC16A10Q8TF71 515 aa17.07■□□□□ 0.32
RACK1-230ENST00000513060 CCDC136Q96JN2 1154 aa17.07■□□□□ 0.32
RACK1-230ENST00000513060 SERPINB2P05120 415 aa17.07■□□□□ 0.32
RACK1-230ENST00000513060 MMP10P09238 476 aa17.07■□□□□ 0.32
RACK1-230ENST00000513060 HCLS1P14317 486 aaPredicted RBP17.07■□□□□ 0.32
RACK1-230ENST00000513060 ATP8B2P98198 1209 aa17.07■□□□□ 0.32
RACK1-230ENST00000513060 B4GALNT3Q6L9W6 998 aa17.07■□□□□ 0.32
RACK1-230ENST00000513060 SIRT2Q8IXJ6 389 aa17.07■□□□□ 0.32
RACK1-230ENST00000513060 ANKRD44Q8N8A2 993 aa17.07■□□□□ 0.32
RACK1-230ENST00000513060 QSER1Q2KHR3 1735 aa17.06■□□□□ 0.32
RACK1-230ENST00000513060 PSDA5PKW4 1024 aaPredicted RBP17.06■□□□□ 0.32
RACK1-230ENST00000513060 FOXO4P98177 505 aa17.06■□□□□ 0.32
RACK1-230ENST00000513060 CNBD1Q8NA66 436 aa17.06■□□□□ 0.32
RACK1-230ENST00000513060 PLA2G12BQ9BX93 195 aa17.06■□□□□ 0.32
RACK1-230ENST00000513060 CCDC24Q8N4L8 307 aa17.05■□□□□ 0.32
RACK1-230ENST00000513060 PARP3Q9Y6F1 533 aa17.05■□□□□ 0.32
RACK1-230ENST00000513060 PNMA6EA0A0J9YXQ4 647 aa17.04■□□□□ 0.32
RACK1-230ENST00000513060 PDE8AO60658 829 aa17.04■□□□□ 0.32
RACK1-230ENST00000513060 HSP90B1P14625 803 aaKnown RBP17.04■□□□□ 0.32
RACK1-230ENST00000513060 RABL6Q3YEC7 729 aaPredicted RBP17.04■□□□□ 0.32
RACK1-230ENST00000513060 LMBR1LQ6UX01 489 aa17.04■□□□□ 0.32
RACK1-230ENST00000513060 RWDD1Q9H446 243 aaPredicted RBP17.04■□□□□ 0.32
RACK1-230ENST00000513060 SRGAP3O43295 1099 aa17.04■□□□□ 0.32
RACK1-230ENST00000513060 ZBTB7AO95365 584 aa17.04■□□□□ 0.32
RACK1-230ENST00000513060 IGHDP01880 384 aa17.04■□□□□ 0.32
RACK1-230ENST00000513060 MTX1Q13505 466 aa17.04■□□□□ 0.32
RACK1-230ENST00000513060 HDAC1Q13547 482 aaPredicted RBP17.04■□□□□ 0.32
RACK1-230ENST00000513060 SLC10A5Q5PT55 438 aa17.04■□□□□ 0.32
RACK1-230ENST00000513060 PRR5LQ6MZQ0 368 aa17.04■□□□□ 0.32
RACK1-230ENST00000513060 CTSWP56202 376 aa17.03■□□□□ 0.32
RACK1-230ENST00000513060 CHMP3Q9Y3E7 222 aa17.03■□□□□ 0.32
RACK1-230ENST00000513060 HMMRO75330 724 aa17.02■□□□□ 0.32
RACK1-230ENST00000513060 CSF1RP07333 972 aa17.02■□□□□ 0.32
RACK1-230ENST00000513060 TTLL11Q8NHH1 800 aa17.02■□□□□ 0.32
RACK1-230ENST00000513060 CCDC85AQ96PX6 553 aaPredicted RBP17.02■□□□□ 0.32
RACK1-230ENST00000513060 ABCC12Q96J65 1359 aa17.02■□□□□ 0.31
RACK1-230ENST00000513060 COL24A1Q17RW2 1714 aa17.01■□□□□ 0.31
RACK1-230ENST00000513060 ST5P78524 1137 aa17.01■□□□□ 0.31
RACK1-230ENST00000513060 SSH3Q8TE77 659 aa17.01■□□□□ 0.31
RACK1-230ENST00000513060 MTFR1LQ9H019 292 aa17.01■□□□□ 0.31
RACK1-230ENST00000513060 POLA2Q14181 598 aa17.01■□□□□ 0.31
RACK1-230ENST00000513060 NLRP3Q96P20 1036 aa17.01■□□□□ 0.31
RACK1-230ENST00000513060 ATF5Q9Y2D1 282 aaPredicted RBP17.01■□□□□ 0.31
RACK1-230ENST00000513060 C3orf67Q6ZVT6 689 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms