RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 SLC4A3P48751 1232 aa9.45□□□□□ -0.9
COPS4-209ENST00000511653 SLC15A2Q16348 729 aa9.45□□□□□ -0.9
COPS4-209ENST00000511653 KMT5BQ4FZB7 885 aa9.45□□□□□ -0.9
COPS4-209ENST00000511653 ANKK1Q8NFD2 765 aa9.45□□□□□ -0.9
COPS4-209ENST00000511653 WNT2BQ93097 391 aa9.45□□□□□ -0.9
COPS4-209ENST00000511653 ARXQ96QS3 562 aa9.45□□□□□ -0.9
COPS4-209ENST00000511653 TRIM34Q9BYJ4 488 aa9.45□□□□□ -0.9
COPS4-209ENST00000511653 STK32BQ9NY57 414 aa9.45□□□□□ -0.9
COPS4-209ENST00000511653 A0A1W2PP64 1363 aa9.44□□□□□ -0.9
COPS4-209ENST00000511653 COL24A1Q17RW2 1714 aa9.44□□□□□ -0.9
COPS4-209ENST00000511653 NLRP2Q9NX02 1062 aa9.44□□□□□ -0.9
COPS4-209ENST00000511653 LY75O60449 1722 aa9.44□□□□□ -0.9
COPS4-209ENST00000511653 EDC4Q6P2E9 1401 aaKnown RBP9.43□□□□□ -0.9
COPS4-209ENST00000511653 PRR7Q8TB68 274 aa9.43□□□□□ -0.9
COPS4-209ENST00000511653 FHDC1Q9C0D6 1143 aaPredicted RBP9.43□□□□□ -0.9
COPS4-209ENST00000511653 WBP1LQ9NX94 342 aa9.43□□□□□ -0.9
COPS4-209ENST00000511653 GOLGA8CPA6NN73 597 aa9.42□□□□□ -0.9
COPS4-209ENST00000511653 RAD21O60216 631 aa9.42□□□□□ -0.9
COPS4-209ENST00000511653 PPP4CP60510 307 aa9.42□□□□□ -0.9
COPS4-209ENST00000511653 ZNF827Q17R98 1081 aa9.42□□□□□ -0.9
COPS4-209ENST00000511653 TMC1Q8TDI8 760 aa9.42□□□□□ -0.9
COPS4-209ENST00000511653 ANKRD24Q8TF21 1146 aa9.42□□□□□ -0.9
COPS4-209ENST00000511653 SLC12A5Q9H2X9 1139 aa9.42□□□□□ -0.9
COPS4-209ENST00000511653 IL2RBP14784 551 aa9.42□□□□□ -0.9
COPS4-209ENST00000511653 ABL2P42684 1182 aa9.42□□□□□ -0.9
COPS4-209ENST00000511653 GRIPAP1Q4V328 841 aa9.42□□□□□ -0.9
COPS4-209ENST00000511653 CCDC82Q8N4S0 544 aa9.42□□□□□ -0.9
COPS4-209ENST00000511653 SYT17Q9BSW7 474 aa9.42□□□□□ -0.9
COPS4-209ENST00000511653 CARD11Q9BXL7 1154 aa9.42□□□□□ -0.9
COPS4-209ENST00000511653 LRRC4BQ9NT99 713 aa9.42□□□□□ -0.9
COPS4-209ENST00000511653 POM121CA8CG34 1229 aa9.41□□□□□ -0.9
COPS4-209ENST00000511653 MTFR1LQ9H019 292 aa9.41□□□□□ -0.9
COPS4-209ENST00000511653 TSR3Q9UJK0 312 aaKnown RBP9.41□□□□□ -0.9
COPS4-209ENST00000511653 POTEMA6NI47 508 aa9.4□□□□□ -0.9
COPS4-209ENST00000511653 IRF5Q13568 498 aa9.4□□□□□ -0.9
COPS4-209ENST00000511653 MEGF6O75095 1541 aa9.39□□□□□ -0.91
COPS4-209ENST00000511653 HDGFL2Q7Z4V5 671 aaPredicted RBP9.39□□□□□ -0.91
COPS4-209ENST00000511653 ZNF784Q8NCA9 323 aaPredicted RBP9.39□□□□□ -0.91
COPS4-209ENST00000511653 THAP11Q96EK4 314 aa9.39□□□□□ -0.91
COPS4-209ENST00000511653 LTV1Q96GA3 475 aaPredicted RBP9.39□□□□□ -0.91
COPS4-209ENST00000511653 NSD2O96028 1365 aa9.39□□□□□ -0.91
COPS4-209ENST00000511653 KIF20BQ96Q89 1820 aa9.39□□□□□ -0.91
COPS4-209ENST00000511653 FBLN1P23142 703 aa9.39□□□□□ -0.91
COPS4-209ENST00000511653 SCUBE3Q8IX30 993 aa9.39□□□□□ -0.91
COPS4-209ENST00000511653 MAP3K5Q99683 1374 aa9.38□□□□□ -0.91
COPS4-209ENST00000511653 KCNQ4P56696 695 aa9.38□□□□□ -0.91
COPS4-209ENST00000511653 BRICD5Q6PL45 260 aa9.38□□□□□ -0.91
COPS4-209ENST00000511653 RETREG3Q86VR2 466 aa9.38□□□□□ -0.91
COPS4-209ENST00000511653 IP6K1Q92551 441 aa9.38□□□□□ -0.91
COPS4-209ENST00000511653 ZNF330Q9Y3S2 320 aaPredicted RBP9.38□□□□□ -0.91
COPS4-209ENST00000511653 MAP3K19Q56UN5 1328 aa9.38□□□□□ -0.91
COPS4-209ENST00000511653 TAF1LQ8IZX4 1826 aa9.38□□□□□ -0.91
COPS4-209ENST00000511653 TOGARAM1Q9Y4F4 1720 aa9.37□□□□□ -0.91
COPS4-209ENST00000511653 NR6A1Q15406 480 aa9.37□□□□□ -0.91
COPS4-209ENST00000511653 THSD4Q6ZMP0 1018 aa9.37□□□□□ -0.91
COPS4-209ENST00000511653 HOMEZQ8IX15 550 aa9.37□□□□□ -0.91
COPS4-209ENST00000511653 HELBQ8NG08 1087 aaPredicted RBP9.37□□□□□ -0.91
COPS4-209ENST00000511653 DDX54Q8TDD1 881 aaKnown RBP9.37□□□□□ -0.91
COPS4-209ENST00000511653 TESK2Q96S53 571 aa9.37□□□□□ -0.91
COPS4-209ENST00000511653 TERF2IPQ9NYB0 399 aa9.37□□□□□ -0.91
COPS4-209ENST00000511653 PCDHB3Q9Y5E6 796 aa9.37□□□□□ -0.91
COPS4-209ENST00000511653 C5P01031 1676 aa9.37□□□□□ -0.91
COPS4-209ENST00000511653 PNPLA7Q6ZV29 1317 aa9.37□□□□□ -0.91
COPS4-209ENST00000511653 TONSLQ96HA7 1378 aa9.37□□□□□ -0.91
COPS4-209ENST00000511653 KCTD12Q96CX2 325 aaKnown RBP9.36□□□□□ -0.91
COPS4-209ENST00000511653 PLSCR2Q9NRY7 297 aa9.36□□□□□ -0.91
COPS4-209ENST00000511653 ITGB4P16144 1822 aa9.36□□□□□ -0.91
COPS4-209ENST00000511653 ANKRD36BQ8N2N9 1353 aa9.36□□□□□ -0.91
COPS4-209ENST00000511653 HOXC9P31274 260 aa9.36□□□□□ -0.91
COPS4-209ENST00000511653 SYTL4Q96C24 671 aaPredicted RBP9.35□□□□□ -0.91
COPS4-209ENST00000511653 NDUFB9Q9Y6M9 179 aa9.35□□□□□ -0.91
COPS4-209ENST00000511653 ST20-MTHFSA0A0A6YYL1 179 aa9.34□□□□□ -0.91
COPS4-209ENST00000511653 COPS2P61201 443 aa9.34□□□□□ -0.91
COPS4-209ENST00000511653 SLC27A3Q5K4L6 730 aa9.34□□□□□ -0.91
COPS4-209ENST00000511653 ADAMTS19Q8TE59 1207 aa9.34□□□□□ -0.91
COPS4-209ENST00000511653 PKD1L3Q7Z443 1732 aa9.33□□□□□ -0.92
COPS4-209ENST00000511653 RRS1Q15050 365 aaKnown RBP9.33□□□□□ -0.92
COPS4-209ENST00000511653 USHBP1Q8N6Y0 703 aa9.33□□□□□ -0.92
COPS4-209ENST00000511653 NLGN2Q8NFZ4 835 aa9.33□□□□□ -0.92
COPS4-209ENST00000511653 COG3Q96JB2 828 aa9.33□□□□□ -0.92
COPS4-209ENST00000511653 PUS7Q96PZ0 661 aaKnown RBP9.33□□□□□ -0.92
COPS4-209ENST00000511653 USB1Q9BQ65 265 aaKnown RBP9.33□□□□□ -0.92
COPS4-209ENST00000511653 RTL1A6NKG5 1358 aa9.33□□□□□ -0.92
COPS4-209ENST00000511653 TLL1O43897 1013 aa9.32□□□□□ -0.92
COPS4-209ENST00000511653 AMPHP49418 695 aa9.32□□□□□ -0.92
COPS4-209ENST00000511653 Q3C1V9 767 aa9.32□□□□□ -0.92
COPS4-209ENST00000511653 POTEGQ6S5H5 508 aa9.32□□□□□ -0.92
COPS4-209ENST00000511653 CDAN1Q8IWY9 1227 aa9.32□□□□□ -0.92
COPS4-209ENST00000511653 FAM160A2Q8N612 972 aaPredicted RBP9.32□□□□□ -0.92
COPS4-209ENST00000511653 NECTIN2Q92692 538 aa9.32□□□□□ -0.92
COPS4-209ENST00000511653 PRDM9Q9NQV7 894 aa9.32□□□□□ -0.92
COPS4-209ENST00000511653 ANKRD26Q9UPS8 1709 aa9.32□□□□□ -0.92
COPS4-209ENST00000511653 UBR3Q6ZT12 1888 aa9.32□□□□□ -0.92
COPS4-209ENST00000511653 NBPF6Q5VWK0 638 aa9.32□□□□□ -0.92
COPS4-209ENST00000511653 LYPD8Q6UX82 237 aa9.32□□□□□ -0.92
COPS4-209ENST00000511653 ZCRB1Q8TBF4 217 aaKnown RBP9.32□□□□□ -0.92
COPS4-209ENST00000511653 SLC16A10Q8TF71 515 aa9.32□□□□□ -0.92
COPS4-209ENST00000511653 NBPF4Q96M43 638 aa9.32□□□□□ -0.92
COPS4-209ENST00000511653 PRR14Q9BWN1 585 aa9.32□□□□□ -0.92
COPS4-209ENST00000511653 GGNBP2Q9H3C7 697 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms