RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 MYCNP04198 464 aaPredicted RBP13.4□□□□□ -0.26
PFDN1-203ENST00000510217 HDGFL1Q5TGJ6 251 aa13.4□□□□□ -0.26
PFDN1-203ENST00000510217 COPS6Q7L5N1 327 aa13.4□□□□□ -0.26
PFDN1-203ENST00000510217 C7orf43Q8WVR3 580 aa13.4□□□□□ -0.26
PFDN1-203ENST00000510217 DDX21Q9NR30 783 aaKnown RBP eCLIP13.4□□□□□ -0.26
PFDN1-203ENST00000510217 IFT57Q9NWB7 429 aa13.4□□□□□ -0.26
PFDN1-203ENST00000510217 KDM2BQ8NHM5 1336 aa13.39□□□□□ -0.27
PFDN1-203ENST00000510217 DDX60Q8IY21 1712 aaKnown RBP13.39□□□□□ -0.27
PFDN1-203ENST00000510217 GTF2E1P29083 439 aaPredicted RBP13.39□□□□□ -0.27
PFDN1-203ENST00000510217 SOGA3Q5TF21 947 aa13.39□□□□□ -0.27
PFDN1-203ENST00000510217 TAOK3Q9H2K8 898 aa13.39□□□□□ -0.27
PFDN1-203ENST00000510217 GTF3C3Q9Y5Q9 886 aa13.39□□□□□ -0.27
PFDN1-203ENST00000510217 CALD1Q05682 793 aaKnown RBP13.38□□□□□ -0.27
PFDN1-203ENST00000510217 AIMP1Q12904 312 aaKnown RBP13.38□□□□□ -0.27
PFDN1-203ENST00000510217 PARP10Q53GL7 1025 aa13.38□□□□□ -0.27
PFDN1-203ENST00000510217 DUSP27Q5VZP5 1158 aa13.38□□□□□ -0.27
PFDN1-203ENST00000510217 OLFM4Q6UX06 510 aa13.38□□□□□ -0.27
PFDN1-203ENST00000510217 ANP32CO43423 234 aa13.37□□□□□ -0.27
PFDN1-203ENST00000510217 GNAI1P63096 354 aa13.37□□□□□ -0.27
PFDN1-203ENST00000510217 CCDC93Q567U6 631 aa13.37□□□□□ -0.27
PFDN1-203ENST00000510217 C3orf67Q6ZVT6 689 aa13.37□□□□□ -0.27
PFDN1-203ENST00000510217 PPP1R42Q7Z4L9 355 aa13.37□□□□□ -0.27
PFDN1-203ENST00000510217 MRS2Q9HD23 443 aa13.37□□□□□ -0.27
PFDN1-203ENST00000510217 GLTPD2A6NH11 291 aa13.36□□□□□ -0.27
PFDN1-203ENST00000510217 TOMM70O94826 608 aa13.36□□□□□ -0.27
PFDN1-203ENST00000510217 HSP90AB3PQ58FF7 597 aa13.36□□□□□ -0.27
PFDN1-203ENST00000510217 NLRP10Q86W26 655 aa13.36□□□□□ -0.27
PFDN1-203ENST00000510217 YTHDC1Q96MU7 727 aaKnown RBP13.36□□□□□ -0.27
PFDN1-203ENST00000510217 UTP14AQ9BVJ6 771 aaKnown RBP13.36□□□□□ -0.27
PFDN1-203ENST00000510217 DBF4Q9UBU7 674 aaPredicted RBP13.36□□□□□ -0.27
PFDN1-203ENST00000510217 RNF123Q5XPI4 1314 aa13.36□□□□□ -0.27
PFDN1-203ENST00000510217 HSPA6P17066 643 aa13.35□□□□□ -0.27
PFDN1-203ENST00000510217 ALDH1B1P30837 517 aa13.35□□□□□ -0.27
PFDN1-203ENST00000510217 HOXA10P31260 410 aaPredicted RBP13.35□□□□□ -0.27
PFDN1-203ENST00000510217 FKBP4Q02790 459 aaKnown RBP eCLIP13.35□□□□□ -0.27
PFDN1-203ENST00000510217 CCDC27Q2M243 656 aa13.35□□□□□ -0.27
PFDN1-203ENST00000510217 SLC51AQ86UW1 340 aa13.35□□□□□ -0.27
PFDN1-203ENST00000510217 RPGRQ92834 1020 aaKnown RBP13.35□□□□□ -0.27
PFDN1-203ENST00000510217 RRAGCQ9HB90 399 aa13.35□□□□□ -0.27
PFDN1-203ENST00000510217 COL4A5P29400 1685 aa13.34□□□□□ -0.27
PFDN1-203ENST00000510217 TCIRG1Q13488 830 aa13.34□□□□□ -0.27
PFDN1-203ENST00000510217 PLBD2Q8NHP8 589 aa13.34□□□□□ -0.27
PFDN1-203ENST00000510217 RBM46Q8TBY0 533 aaKnown RBP13.34□□□□□ -0.27
PFDN1-203ENST00000510217 HYPKQ9NX55 129 aa13.34□□□□□ -0.27
PFDN1-203ENST00000510217 LRRC37AA6NMS7 1700 aa13.33□□□□□ -0.27
PFDN1-203ENST00000510217 ELL2O00472 640 aaPredicted RBP13.33□□□□□ -0.28
PFDN1-203ENST00000510217 SLC10A5Q5PT55 438 aa13.33□□□□□ -0.28
PFDN1-203ENST00000510217 WWC1Q8IX03 1113 aa13.33□□□□□ -0.28
PFDN1-203ENST00000510217 C8orf58Q8NAV2 365 aa13.33□□□□□ -0.28
PFDN1-203ENST00000510217 TSR2Q969E8 191 aaKnown RBP13.33□□□□□ -0.28
PFDN1-203ENST00000510217 ZNF277Q9NRM2 450 aaPredicted RBP13.33□□□□□ -0.28
PFDN1-203ENST00000510217 TAF1P21675 1872 aa13.32□□□□□ -0.28
PFDN1-203ENST00000510217 CEP350Q5VT06 3117 aa13.32□□□□□ -0.28
PFDN1-203ENST00000510217 COL4A1P02462 1669 aa13.32□□□□□ -0.28
PFDN1-203ENST00000510217 POTECB2RU33 542 aa13.32□□□□□ -0.28
PFDN1-203ENST00000510217 ANKRD13DQ6ZTN6 518 aa13.32□□□□□ -0.28
PFDN1-203ENST00000510217 C16orf71Q8IYS4 520 aaPredicted RBP13.32□□□□□ -0.28
PFDN1-203ENST00000510217 RTKN2Q8IZC4 609 aa13.32□□□□□ -0.28
PFDN1-203ENST00000510217 SYNE4Q8N205 404 aa13.32□□□□□ -0.28
PFDN1-203ENST00000510217 TSPYL6Q8N831 410 aa13.32□□□□□ -0.28
PFDN1-203ENST00000510217 RBM17Q96I25 401 aaKnown RBP13.32□□□□□ -0.28
PFDN1-203ENST00000510217 NLRP3Q96P20 1036 aa13.32□□□□□ -0.28
PFDN1-203ENST00000510217 CRAMP1Q96RY5 1269 aa13.32□□□□□ -0.28
PFDN1-203ENST00000510217 ISCA1Q9BUE6 129 aa13.32□□□□□ -0.28
PFDN1-203ENST00000510217 ABCC4O15439 1325 aa13.32□□□□□ -0.28
PFDN1-203ENST00000510217 PPEF1O14829 653 aaPredicted RBP13.31□□□□□ -0.28
PFDN1-203ENST00000510217 HCLS1P14317 486 aaPredicted RBP13.31□□□□□ -0.28
PFDN1-203ENST00000510217 ZNF428Q96B54 188 aa13.31□□□□□ -0.28
PFDN1-203ENST00000510217 PSMD1Q99460 953 aa13.31□□□□□ -0.28
PFDN1-203ENST00000510217 PHAXQ9H814 394 aaKnown RBP13.31□□□□□ -0.28
PFDN1-203ENST00000510217 TRMT112Q9UI30 125 aaKnown RBP13.31□□□□□ -0.28
PFDN1-203ENST00000510217 SCN4AP35499 1836 aa13.31□□□□□ -0.28
PFDN1-203ENST00000510217 SH3TC1Q8TE82 1336 aa13.31□□□□□ -0.28
PFDN1-203ENST00000510217 ZNF541Q9H0D2 1346 aa13.31□□□□□ -0.28
PFDN1-203ENST00000510217 DUOX1Q9NRD9 1551 aa13.3□□□□□ -0.28
PFDN1-203ENST00000510217 ATP5J2-PTCD1G3V325 749 aa13.3□□□□□ -0.28
PFDN1-203ENST00000510217 VEGFAP15692 232 aaPredicted RBP13.3□□□□□ -0.28
PFDN1-203ENST00000510217 IARSP41252 1262 aaKnown RBP13.3□□□□□ -0.28
PFDN1-203ENST00000510217 DPY19L2Q6NUT2 758 aa13.3□□□□□ -0.28
PFDN1-203ENST00000510217 IL16Q14005 1332 aa13.3□□□□□ -0.28
PFDN1-203ENST00000510217 DDNO94850 711 aaPredicted RBP13.29□□□□□ -0.28
PFDN1-203ENST00000510217 GOLGA2Q08379 1002 aa13.29□□□□□ -0.28
PFDN1-203ENST00000510217 FSTL1Q12841 308 aa13.29□□□□□ -0.28
PFDN1-203ENST00000510217 CC2D2BQ6DHV5 1058 aa13.29□□□□□ -0.28
PFDN1-203ENST00000510217 LTBP1Q14766 1721 aa13.29□□□□□ -0.28
PFDN1-203ENST00000510217 ADAMTSL1Q8N6G6 1762 aa13.29□□□□□ -0.28
PFDN1-203ENST00000510217 CCDC30Q5VVM6 783 aa13.28□□□□□ -0.28
PFDN1-203ENST00000510217 SMC1BQ8NDV3 1235 aa13.28□□□□□ -0.28
PFDN1-203ENST00000510217 FANCIQ9NVI1 1328 aa13.28□□□□□ -0.28
PFDN1-203ENST00000510217 FZD9O00144 591 aa13.27□□□□□ -0.29
PFDN1-203ENST00000510217 TCERG1O14776 1098 aaKnown RBP13.27□□□□□ -0.29
PFDN1-203ENST00000510217 APLP1P51693 650 aa13.27□□□□□ -0.29
PFDN1-203ENST00000510217 TRIM28Q13263 835 aaKnown RBP13.27□□□□□ -0.29
PFDN1-203ENST00000510217 GRIPAP1Q4V328 841 aa13.27□□□□□ -0.29
PFDN1-203ENST00000510217 RIC3Q7Z5B4 369 aa13.27□□□□□ -0.29
PFDN1-203ENST00000510217 FAM89AQ96GI7 184 aa13.27□□□□□ -0.29
PFDN1-203ENST00000510217 L3MBTL3Q96JM7 780 aaPredicted RBP13.27□□□□□ -0.29
PFDN1-203ENST00000510217 ATP6V0A2Q9Y487 856 aa13.27□□□□□ -0.29
PFDN1-203ENST00000510217 GRAPQ13588 217 aa13.26□□□□□ -0.29
PFDN1-203ENST00000510217 TWISTNBQ3B726 338 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms