RNA–Protein interactions for RNA: ENST00000509967.6

TRIO-214, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-214ENST00000509967 GOLGA8AA7E2F4 631 aa10.7□□□□□ -0.7
TRIO-214ENST00000509967 GOLGA8BA8MQT2 603 aa10.7□□□□□ -0.7
TRIO-214ENST00000509967 CRACR2AQ9BSW2 395 aa10.7□□□□□ -0.7
TRIO-214ENST00000509967 NAA15Q9BXJ9 866 aaKnown RBP10.7□□□□□ -0.7
TRIO-214ENST00000509967 TMOD2Q9NZR1 351 aa10.7□□□□□ -0.7
TRIO-214ENST00000509967 TRIM21P19474 475 aaKnown RBP10.7□□□□□ -0.7
TRIO-214ENST00000509967 RAB3GAP1Q15042 981 aa10.7□□□□□ -0.7
TRIO-214ENST00000509967 FBXO31Q5XUX0 539 aaPredicted RBP10.7□□□□□ -0.7
TRIO-214ENST00000509967 STXBP4Q6ZWJ1 553 aa10.7□□□□□ -0.7
TRIO-214ENST00000509967 DDX12PQ92771 950 aa10.7□□□□□ -0.7
TRIO-214ENST00000509967 TANGO6Q9C0B7 1094 aa10.7□□□□□ -0.7
TRIO-214ENST00000509967 RBM25P49756 843 aaKnown RBP10.7□□□□□ -0.7
TRIO-214ENST00000509967 PPP1R42Q7Z4L9 355 aa10.7□□□□□ -0.7
TRIO-214ENST00000509967 BOLA2Q9H3K6 86 aa10.7□□□□□ -0.7
TRIO-214ENST00000509967 IL15P40933 162 aaPredicted RBP10.69□□□□□ -0.7
TRIO-214ENST00000509967 GNAQP50148 359 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 GSTO1P78417 241 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 CADPS2Q86UW7 1296 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 FSIP1Q8NA03 581 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 FAM200AQ8TCP9 573 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 SIRT1Q96EB6 747 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 TMX3Q96JJ7 454 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 CALCOCO1Q9P1Z2 691 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 RTL1A6NKG5 1358 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 MAP3K5Q99683 1374 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 MICALCLQ6ZW33 695 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 CNNM3Q8NE01 707 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 DDX54Q8TDD1 881 aaKnown RBP10.69□□□□□ -0.7
TRIO-214ENST00000509967 THUMPD2Q9BTF0 503 aaKnown RBP10.69□□□□□ -0.7
TRIO-214ENST00000509967 KDM5AP29375 1690 aaKnown RBP10.69□□□□□ -0.7
TRIO-214ENST00000509967 SMARCA5O60264 1052 aaPredicted RBP10.69□□□□□ -0.7
TRIO-214ENST00000509967 GNAT2P19087 354 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 IARSP41252 1262 aaKnown RBP10.69□□□□□ -0.7
TRIO-214ENST00000509967 PIP4K2BP78356 416 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 CCDC102BQ68D86 513 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 KSR2Q6VAB6 950 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 ZGPATQ8N5A5 531 aaKnown RBP10.69□□□□□ -0.7
TRIO-214ENST00000509967 RRAGDQ9NQL2 400 aaPredicted RBP10.69□□□□□ -0.7
TRIO-214ENST00000509967 ZBTB40Q9NUA8 1239 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 MAP3K2Q9Y2U5 619 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 PER1O15534 1290 aaPredicted RBP10.69□□□□□ -0.7
TRIO-214ENST00000509967 XRCC6P12956 609 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRIO-214ENST00000509967 SDSP20132 328 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 IFI16Q16666 785 aaKnown RBP10.69□□□□□ -0.7
TRIO-214ENST00000509967 ZSCAN23Q3MJ62 389 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 ALS2CR12Q96Q35 445 aa10.69□□□□□ -0.7
TRIO-214ENST00000509967 YTHDC2Q9H6S0 1430 aaKnown RBP10.69□□□□□ -0.7
TRIO-214ENST00000509967 LINS1Q8NG48 757 aa10.68□□□□□ -0.7
TRIO-214ENST00000509967 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.68□□□□□ -0.78e-7■■□□□ 14.2
TRIO-214ENST00000509967 SHTN1A0MZ66 631 aa10.68□□□□□ -0.7
TRIO-214ENST00000509967 CALM1P0DP23 149 aa10.68□□□□□ -0.7
TRIO-214ENST00000509967 CALM2P0DP24 149 aa10.68□□□□□ -0.7
TRIO-214ENST00000509967 CALM3P0DP25 149 aa10.68□□□□□ -0.7
TRIO-214ENST00000509967 PAFAH1B1P43034 410 aa10.68□□□□□ -0.7
TRIO-214ENST00000509967 PRM3Q9NNZ6 103 aa10.68□□□□□ -0.7
TRIO-214ENST00000509967 PPP1R2P41236 205 aa10.68□□□□□ -0.7
TRIO-214ENST00000509967 PDE4BQ07343 736 aa10.68□□□□□ -0.7
TRIO-214ENST00000509967 ZNF165P49910 485 aa10.68□□□□□ -0.7
TRIO-214ENST00000509967 CKAP4Q07065 602 aaKnown RBP10.68□□□□□ -0.7
TRIO-214ENST00000509967 NPHP3Q7Z494 1330 aa10.67□□□□□ -0.7
TRIO-214ENST00000509967 CCDC194A0A1B0GVG4 234 aa10.67□□□□□ -0.7
TRIO-214ENST00000509967 ZFYVE27Q5T4F4 411 aa10.67□□□□□ -0.7
TRIO-214ENST00000509967 PHF23Q9BUL5 403 aaPredicted RBP10.67□□□□□ -0.7
TRIO-214ENST00000509967 NEO1Q92859 1461 aa10.67□□□□□ -0.7
TRIO-214ENST00000509967 SSH2Q76I76 1423 aa10.67□□□□□ -0.7
TRIO-214ENST00000509967 TNNT1P13805 278 aa10.67□□□□□ -0.7
TRIO-214ENST00000509967 PDE4CQ08493 712 aa10.67□□□□□ -0.7
TRIO-214ENST00000509967 BRAPQ7Z569 592 aa10.67□□□□□ -0.7
TRIO-214ENST00000509967 FMNL3Q8IVF7 1028 aa10.67□□□□□ -0.7
TRIO-214ENST00000509967 IFIT3O14879 490 aaKnown RBP10.67□□□□□ -0.7
TRIO-214ENST00000509967 CCDC172P0C7W6 258 aa10.67□□□□□ -0.7
TRIO-214ENST00000509967 BMS1Q14692 1282 aaKnown RBP10.67□□□□□ -0.7
TRIO-214ENST00000509967 TCP11L1Q9NUJ3 509 aa10.67□□□□□ -0.7
TRIO-214ENST00000509967 KIAA0232Q92628 1395 aa10.67□□□□□ -0.7
TRIO-214ENST00000509967 ADCY5O95622 1261 aa10.67□□□□□ -0.7
TRIO-214ENST00000509967 BAG3O95817 575 aa10.67□□□□□ -0.7
TRIO-214ENST00000509967 TTLL5Q6EMB2 1281 aa10.67□□□□□ -0.7
TRIO-214ENST00000509967 CALML4Q96GE6 196 aa10.67□□□□□ -0.7
TRIO-214ENST00000509967 PCDHB15Q9Y5E8 787 aa10.67□□□□□ -0.7
TRIO-214ENST00000509967 KDM2BQ8NHM5 1336 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 CLASP1Q7Z460 1538 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 EZRP15311 586 aaKnown RBP10.66□□□□□ -0.7
TRIO-214ENST00000509967 MCMDC2Q4G0Z9 681 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 RTL9Q8NET4 1388 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 NBPF7P0C2Y1 421 aaPredicted RBP10.66□□□□□ -0.7
TRIO-214ENST00000509967 USP5P45974 858 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 RBM10P98175 930 aaKnown RBP10.66□□□□□ -0.7
TRIO-214ENST00000509967 CETN1Q12798 172 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 SEPT7Q16181 437 aaKnown RBP10.66□□□□□ -0.7
TRIO-214ENST00000509967 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.66□□□□□ -0.7
TRIO-214ENST00000509967 INCENPQ9NQS7 918 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 USP16Q9Y5T5 823 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 SYNMO15061 1565 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 GRM8O00222 908 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 MYO1BO43795 1136 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 VAMP4O75379 141 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 F13A1P00488 732 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 METAP2P50579 478 aaKnown RBP eCLIP10.66□□□□□ -0.7
TRIO-214ENST00000509967 TUBB2AQ13885 445 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 TUBB2BQ9BVA1 445 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms