RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 GNAI1P63096 354 aa27.61■■■□□ 2.01
LIN54-208ENST00000509748 C3orf67Q6ZVT6 689 aa27.61■■■□□ 2.01
LIN54-208ENST00000509748 PPP1R42Q7Z4L9 355 aa27.61■■■□□ 2.01
LIN54-208ENST00000509748 ANKRD36CQ5JPF3 1778 aa27.6■■■□□ 2.01
LIN54-208ENST00000509748 SLC10A5Q5PT55 438 aa27.6■■■□□ 2.01
LIN54-208ENST00000509748 CALD1Q05682 793 aaKnown RBP27.59■■■□□ 2.01
LIN54-208ENST00000509748 TCIRG1Q13488 830 aa27.59■■■□□ 2.01
LIN54-208ENST00000509748 CCDC93Q567U6 631 aa27.59■■■□□ 2.01
LIN54-208ENST00000509748 NLRP10Q86W26 655 aa27.59■■■□□ 2.01
LIN54-208ENST00000509748 DBF4Q9UBU7 674 aaPredicted RBP27.59■■■□□ 2.01
LIN54-208ENST00000509748 HSP90AB3PQ58FF7 597 aa27.58■■■□□ 2.01
LIN54-208ENST00000509748 UTP14AQ9BVJ6 771 aaKnown RBP27.58■■■□□ 2.01
LIN54-208ENST00000509748 SNED1Q8TER0 1413 aa27.58■■■□□ 2
LIN54-208ENST00000509748 RBM46Q8TBY0 533 aaKnown RBP27.57■■■□□ 2
LIN54-208ENST00000509748 ANP32CO43423 234 aa27.56■■■□□ 2
LIN54-208ENST00000509748 C8orf58Q8NAV2 365 aa27.56■■■□□ 2
LIN54-208ENST00000509748 POTECB2RU33 542 aa27.55■■■□□ 2
LIN54-208ENST00000509748 FKBP4Q02790 459 aaKnown RBP eCLIP27.55■■■□□ 2
LIN54-208ENST00000509748 SYNE4Q8N205 404 aa27.55■■■□□ 2
LIN54-208ENST00000509748 PLBD2Q8NHP8 589 aa27.55■■■□□ 2
LIN54-208ENST00000509748 CRAMP1Q96RY5 1269 aa27.55■■■□□ 2
LIN54-208ENST00000509748 MRS2Q9HD23 443 aa27.55■■■□□ 2
LIN54-208ENST00000509748 HYPKQ9NX55 129 aa27.55■■■□□ 2
LIN54-208ENST00000509748 ELL2O00472 640 aaPredicted RBP27.54■■■□□ 2
LIN54-208ENST00000509748 CCDC27Q2M243 656 aa27.54■■■□□ 2
LIN54-208ENST00000509748 ANKRD13DQ6ZTN6 518 aa27.54■■■□□ 2
LIN54-208ENST00000509748 RTKN2Q8IZC4 609 aa27.54■■■□□ 2
LIN54-208ENST00000509748 RPGRQ92834 1020 aaKnown RBP27.54■■■□□ 2
LIN54-208ENST00000509748 RNF123Q5XPI4 1314 aa27.53■■■□□ 2
LIN54-208ENST00000509748 VEGFAP15692 232 aaPredicted RBP27.52■■■□□ 2
LIN54-208ENST00000509748 SLC51AQ86UW1 340 aa27.52■■■□□ 2
LIN54-208ENST00000509748 WWC1Q8IX03 1113 aa27.52■■■□□ 2
LIN54-208ENST00000509748 C16orf71Q8IYS4 520 aaPredicted RBP27.52■■■□□ 2
LIN54-208ENST00000509748 RBM17Q96I25 401 aaKnown RBP27.52■■■□□ 2
LIN54-208ENST00000509748 NLRP3Q96P20 1036 aa27.52■■■□□ 2
LIN54-208ENST00000509748 ISCA1Q9BUE6 129 aa27.52■■■□□ 2
LIN54-208ENST00000509748 ZNF277Q9NRM2 450 aaPredicted RBP27.52■■■□□ 2
LIN54-208ENST00000509748 WDR90Q96KV7 1748 aa27.52■■■□□ 2
LIN54-208ENST00000509748 DPY19L2Q6NUT2 758 aa27.51■■□□□ 1.99
LIN54-208ENST00000509748 NCBP3Q53F19 620 aaKnown RBP27.5■■□□□ 1.99
LIN54-208ENST00000509748 LAMB2P55268 1798 aa27.5■■□□□ 1.99
LIN54-208ENST00000509748 HCLS1P14317 486 aaPredicted RBP27.49■■□□□ 1.99
LIN54-208ENST00000509748 CC2D2BQ6DHV5 1058 aa27.49■■□□□ 1.99
LIN54-208ENST00000509748 TSPYL6Q8N831 410 aa27.49■■□□□ 1.99
LIN54-208ENST00000509748 PHAXQ9H814 394 aaKnown RBP27.49■■□□□ 1.99
LIN54-208ENST00000509748 TRMT112Q9UI30 125 aaKnown RBP27.49■■□□□ 1.99
LIN54-208ENST00000509748 FSTL1Q12841 308 aa27.48■■□□□ 1.99
LIN54-208ENST00000509748 PSMD1Q99460 953 aa27.48■■□□□ 1.99
LIN54-208ENST00000509748 SH3TC1Q8TE82 1336 aa27.47■■□□□ 1.99
LIN54-208ENST00000509748 DDNO94850 711 aaPredicted RBP27.47■■□□□ 1.99
LIN54-208ENST00000509748 TSR2Q969E8 191 aaKnown RBP27.47■■□□□ 1.99
LIN54-208ENST00000509748 ZNF428Q96B54 188 aa27.47■■□□□ 1.99
LIN54-208ENST00000509748 ATP5J2-PTCD1G3V325 749 aa27.46■■□□□ 1.99
LIN54-208ENST00000509748 TRIM28Q13263 835 aaKnown RBP27.46■■□□□ 1.99
LIN54-208ENST00000509748 PPEF1O14829 653 aaPredicted RBP27.45■■□□□ 1.98
LIN54-208ENST00000509748 IARSP41252 1262 aaKnown RBP27.45■■□□□ 1.98
LIN54-208ENST00000509748 ABCC4O15439 1325 aa27.44■■□□□ 1.98
LIN54-208ENST00000509748 APLP1P51693 650 aa27.44■■□□□ 1.98
LIN54-208ENST00000509748 IL16Q14005 1332 aa27.43■■□□□ 1.98
LIN54-208ENST00000509748 TCERG1O14776 1098 aaKnown RBP27.43■■□□□ 1.98
LIN54-208ENST00000509748 GRIPAP1Q4V328 841 aa27.43■■□□□ 1.98
LIN54-208ENST00000509748 ATP6V0A2Q9Y487 856 aa27.43■■□□□ 1.98
LIN54-208ENST00000509748 COL4A5P29400 1685 aa27.43■■□□□ 1.98
LIN54-208ENST00000509748 ZNF541Q9H0D2 1346 aa27.42■■□□□ 1.98
LIN54-208ENST00000509748 DDX60Q8IY21 1712 aaKnown RBP27.42■■□□□ 1.98
LIN54-208ENST00000509748 CCDC30Q5VVM6 783 aa27.42■■□□□ 1.98
LIN54-208ENST00000509748 SMC1BQ8NDV3 1235 aa27.42■■□□□ 1.98
LIN54-208ENST00000509748 FAM89AQ96GI7 184 aa27.42■■□□□ 1.98
LIN54-208ENST00000509748 TAF1P21675 1872 aa27.41■■□□□ 1.98
LIN54-208ENST00000509748 FZD9O00144 591 aa27.41■■□□□ 1.98
LIN54-208ENST00000509748 RIC3Q7Z5B4 369 aa27.41■■□□□ 1.98
LIN54-208ENST00000509748 BBOX1O75936 387 aa27.4■■□□□ 1.98
LIN54-208ENST00000509748 GOLGA2Q08379 1002 aa27.4■■□□□ 1.98
LIN54-208ENST00000509748 L3MBTL3Q96JM7 780 aaPredicted RBP27.4■■□□□ 1.98
LIN54-208ENST00000509748 DNAJC5GQ8N7S2 189 aa27.39■■□□□ 1.98
LIN54-208ENST00000509748 CHMP4AQ9BY43 222 aa27.38■■□□□ 1.97
LIN54-208ENST00000509748 SF3B3Q15393 1217 aaKnown RBP27.37■■□□□ 1.97
LIN54-208ENST00000509748 DDX46Q7L014 1031 aaKnown RBP27.37■■□□□ 1.97
LIN54-208ENST00000509748 SP8Q8IXZ3 490 aa27.37■■□□□ 1.97
LIN54-208ENST00000509748 GRAPQ13588 217 aa27.36■■□□□ 1.97
LIN54-208ENST00000509748 WDR63Q8IWG1 891 aa27.36■■□□□ 1.97
LIN54-208ENST00000509748 GRAPLQ8TC17 118 aaPredicted RBP27.36■■□□□ 1.97
LIN54-208ENST00000509748 MYD88Q99836 296 aa27.36■■□□□ 1.97
LIN54-208ENST00000509748 SALL2Q9Y467 1007 aaPredicted RBP27.36■■□□□ 1.97
LIN54-208ENST00000509748 SCN4AP35499 1836 aa27.36■■□□□ 1.97
LIN54-208ENST00000509748 HTRA3P83110 453 aa27.35■■□□□ 1.97
LIN54-208ENST00000509748 TWISTNBQ3B726 338 aaPredicted RBP27.35■■□□□ 1.97
LIN54-208ENST00000509748 RTL5Q5HYW3 569 aaPredicted RBP27.35■■□□□ 1.97
LIN54-208ENST00000509748 METTL22Q9BUU2 404 aaPredicted RBP27.35■■□□□ 1.97
LIN54-208ENST00000509748 RTFDC1Q9BY42 306 aaPredicted RBP27.35■■□□□ 1.97
LIN54-208ENST00000509748 POTEIP0CG38 1075 aa27.34■■□□□ 1.97
LIN54-208ENST00000509748 POTEJP0CG39 1038 aa27.34■■□□□ 1.97
LIN54-208ENST00000509748 ZBTB38Q8NAP3 1195 aaPredicted RBP27.34■■□□□ 1.97
LIN54-208ENST00000509748 JDP2Q8WYK2 163 aa27.34■■□□□ 1.97
LIN54-208ENST00000509748 FANCIQ9NVI1 1328 aa27.34■■□□□ 1.97
LIN54-208ENST00000509748 IRS4O14654 1257 aaPredicted RBP27.33■■□□□ 1.97
LIN54-208ENST00000509748 CCDC191Q8NCU4 936 aa27.33■■□□□ 1.97
LIN54-208ENST00000509748 TAF1DQ9H5J8 278 aaPredicted RBP27.33■■□□□ 1.97
LIN54-208ENST00000509748 COL4A1P02462 1669 aa27.33■■□□□ 1.97
LIN54-208ENST00000509748 G2E3Q7L622 706 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms