RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 ZEB1P37275 1124 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-227ENST00000508818 HSP90AB3PQ58FF7 597 aa13.14□□□□□ -0.31
UBE2D3-227ENST00000508818 COPS6Q7L5N1 327 aa13.14□□□□□ -0.31
UBE2D3-227ENST00000508818 C7orf43Q8WVR3 580 aa13.14□□□□□ -0.31
UBE2D3-227ENST00000508818 RBM17Q96I25 401 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-227ENST00000508818 TRIM35Q9UPQ4 493 aa13.14□□□□□ -0.31
UBE2D3-227ENST00000508818 CCDC88AQ3V6T2 1871 aa13.14□□□□□ -0.31
UBE2D3-227ENST00000508818 FKBP4Q02790 459 aaKnown RBP eCLIP13.13□□□□□ -0.312e-9■■□□□ 12.2
UBE2D3-227ENST00000508818 PDIA6Q15084 440 aa13.13□□□□□ -0.31
UBE2D3-227ENST00000508818 PROSER3Q2NL68 480 aa13.13□□□□□ -0.31
UBE2D3-227ENST00000508818 XAGE3Q8WTP9 111 aa13.13□□□□□ -0.31
UBE2D3-227ENST00000508818 NLRP3Q96P20 1036 aa13.13□□□□□ -0.31
UBE2D3-227ENST00000508818 UTP14AQ9BVJ6 771 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-227ENST00000508818 UBN2Q6ZU65 1347 aa13.13□□□□□ -0.31
UBE2D3-227ENST00000508818 TNRC6CQ9HCJ0 1690 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-227ENST00000508818 CALD1Q05682 793 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-227ENST00000508818 HDGFL1Q5TGJ6 251 aa13.12□□□□□ -0.31
UBE2D3-227ENST00000508818 CC2D2BQ6DHV5 1058 aa13.12□□□□□ -0.31
UBE2D3-227ENST00000508818 SYNE4Q8N205 404 aa13.12□□□□□ -0.31
UBE2D3-227ENST00000508818 DDX21Q9NR30 783 aaKnown RBP eCLIP13.12□□□□□ -0.31
UBE2D3-227ENST00000508818 ZNF277Q9NRM2 450 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-227ENST00000508818 NUP98P52948 1817 aa13.11□□□□□ -0.31
UBE2D3-227ENST00000508818 IBTKQ9P2D0 1353 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-227ENST00000508818 CACNA1SQ13698 1873 aa13.11□□□□□ -0.31
UBE2D3-227ENST00000508818 APAF1O14727 1248 aa13.11□□□□□ -0.31
UBE2D3-227ENST00000508818 TCERG1O14776 1098 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-227ENST00000508818 DDNO94850 711 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-227ENST00000508818 HOXA10P31260 410 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-227ENST00000508818 KRT24Q2M2I5 525 aa13.11□□□□□ -0.31
UBE2D3-227ENST00000508818 CRY2Q49AN0 593 aa13.11□□□□□ -0.31
UBE2D3-227ENST00000508818 OLFM4Q6UX06 510 aa13.11□□□□□ -0.31
UBE2D3-227ENST00000508818 JDP2Q8WYK2 163 aa13.11□□□□□ -0.31
UBE2D3-227ENST00000508818 CFAP44Q96MT7 982 aa13.11□□□□□ -0.31
UBE2D3-227ENST00000508818 FER1L6Q2WGJ9 1857 aa13.1□□□□□ -0.31
UBE2D3-227ENST00000508818 ABCC12Q96J65 1359 aa13.1□□□□□ -0.31
UBE2D3-227ENST00000508818 IQCA1LA6NCM1 817 aa13.1□□□□□ -0.31
UBE2D3-227ENST00000508818 NTSR2O95665 410 aa13.1□□□□□ -0.31
UBE2D3-227ENST00000508818 HOXB7P09629 217 aa13.1□□□□□ -0.31
UBE2D3-227ENST00000508818 GRIPAP1Q4V328 841 aa13.1□□□□□ -0.31
UBE2D3-227ENST00000508818 CRAMP1Q96RY5 1269 aa13.1□□□□□ -0.31
UBE2D3-227ENST00000508818 CHPF2Q9P2E5 772 aa13.1□□□□□ -0.31
UBE2D3-227ENST00000508818 DBF4Q9UBU7 674 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-227ENST00000508818 TRMT112Q9UI30 125 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-227ENST00000508818 TIAM2Q8IVF5 1701 aa13.1□□□□□ -0.31
UBE2D3-227ENST00000508818 PPEF1O14829 653 aaPredicted RBP13.09□□□□□ -0.31
UBE2D3-227ENST00000508818 IARSP41252 1262 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-227ENST00000508818 GNAI1P63096 354 aa13.09□□□□□ -0.31
UBE2D3-227ENST00000508818 TCIRG1Q13488 830 aa13.09□□□□□ -0.31
UBE2D3-227ENST00000508818 SLC10A5Q5PT55 438 aa13.09□□□□□ -0.31
UBE2D3-227ENST00000508818 DUSP27Q5VZP5 1158 aa13.09□□□□□ -0.31
UBE2D3-227ENST00000508818 LRP10Q7Z4F1 713 aa13.09□□□□□ -0.31
UBE2D3-227ENST00000508818 ARFGEF2Q9Y6D5 1785 aa13.08□□□□□ -0.32
UBE2D3-227ENST00000508818 POTECB2RU33 542 aa13.08□□□□□ -0.32
UBE2D3-227ENST00000508818 HTRA3P83110 453 aa13.08□□□□□ -0.32
UBE2D3-227ENST00000508818 ANKRD13DQ6ZTN6 518 aa13.08□□□□□ -0.32
UBE2D3-227ENST00000508818 NLRP10Q86W26 655 aa13.08□□□□□ -0.32
UBE2D3-227ENST00000508818 DNAJC5GQ8N7S2 189 aa13.08□□□□□ -0.32
UBE2D3-227ENST00000508818 PSMD1Q99460 953 aa13.08□□□□□ -0.32
UBE2D3-227ENST00000508818 MBIPQ9NS73 344 aa13.08□□□□□ -0.32
UBE2D3-227ENST00000508818 HYPKQ9NX55 129 aa13.08□□□□□ -0.32
UBE2D3-227ENST00000508818 RNF123Q5XPI4 1314 aa13.08□□□□□ -0.32
UBE2D3-227ENST00000508818 DICER1Q9UPY3 1922 aaKnown RBP13.07□□□□□ -0.32
UBE2D3-227ENST00000508818 EIF6P56537 245 aaKnown RBP13.07□□□□□ -0.32
UBE2D3-227ENST00000508818 CHADLQ6NUI6 762 aa13.07□□□□□ -0.32
UBE2D3-227ENST00000508818 PLBD2Q8NHP8 589 aa13.07□□□□□ -0.32
UBE2D3-227ENST00000508818 CHMP4AQ9BY43 222 aa13.07□□□□□ -0.32
UBE2D3-227ENST00000508818 IFT57Q9NWB7 429 aa13.07□□□□□ -0.32
UBE2D3-227ENST00000508818 SH3TC1Q8TE82 1336 aa13.07□□□□□ -0.32
UBE2D3-227ENST00000508818 CEP350Q5VT06 3117 aa13.06□□□□□ -0.32
UBE2D3-227ENST00000508818 RIC1Q4ADV7 1423 aa13.06□□□□□ -0.32
UBE2D3-227ENST00000508818 ELL2O00472 640 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-227ENST00000508818 BBOX1O75936 387 aa13.06□□□□□ -0.32
UBE2D3-227ENST00000508818 HCLS1P14317 486 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-227ENST00000508818 C3orf67Q6ZVT6 689 aa13.06□□□□□ -0.32
UBE2D3-227ENST00000508818 DDX46Q7L014 1031 aaKnown RBP13.06□□□□□ -0.32
UBE2D3-227ENST00000508818 LARGE2Q8N3Y3 721 aa13.06□□□□□ -0.32
UBE2D3-227ENST00000508818 KLRG1Q96E93 195 aa13.06□□□□□ -0.32
UBE2D3-227ENST00000508818 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
UBE2D3-227ENST00000508818 WDR90Q96KV7 1748 aa13.05□□□□□ -0.32
UBE2D3-227ENST00000508818 GOLGA2Q08379 1002 aa13.05□□□□□ -0.32
UBE2D3-227ENST00000508818 EAPPQ56P03 285 aaPredicted RBP13.05□□□□□ -0.32
UBE2D3-227ENST00000508818 RIC3Q7Z5B4 369 aa13.05□□□□□ -0.32
UBE2D3-227ENST00000508818 SUPT20HQ8NEM7 779 aa13.05□□□□□ -0.32
UBE2D3-227ENST00000508818 L3MBTL3Q96JM7 780 aaPredicted RBP13.05□□□□□ -0.32
UBE2D3-227ENST00000508818 HACL1Q9UJ83 578 aa13.05□□□□□ -0.32
UBE2D3-227ENST00000508818 ATP6V0A2Q9Y487 856 aa13.05□□□□□ -0.32
UBE2D3-227ENST00000508818 GJA3Q9Y6H8 435 aa13.05□□□□□ -0.32
UBE2D3-227ENST00000508818 ZNF541Q9H0D2 1346 aa13.05□□□□□ -0.32
UBE2D3-227ENST00000508818 ATP5J2-PTCD1G3V325 749 aa13.04□□□□□ -0.32
UBE2D3-227ENST00000508818 FZD9O00144 591 aa13.04□□□□□ -0.32
UBE2D3-227ENST00000508818 ZNF853P0CG23 659 aa13.04□□□□□ -0.32
UBE2D3-227ENST00000508818 NIM1KQ8IY84 436 aa13.04□□□□□ -0.32
UBE2D3-227ENST00000508818 GPC2Q8N158 579 aa13.04□□□□□ -0.32
UBE2D3-227ENST00000508818 ZNF428Q96B54 188 aa13.04□□□□□ -0.32
UBE2D3-227ENST00000508818 TAF1DQ9H5J8 278 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-227ENST00000508818 PPIP5K2O43314 1243 aa13.03□□□□□ -0.32
UBE2D3-227ENST00000508818 ANP32CO43423 234 aa13.03□□□□□ -0.32
UBE2D3-227ENST00000508818 LMOD1P29536 600 aaPredicted RBP13.03□□□□□ -0.32
UBE2D3-227ENST00000508818 EPHX2P34913 555 aa13.03□□□□□ -0.32
UBE2D3-227ENST00000508818 DPP8Q6V1X1 898 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms