RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 CLEC17AQ6ZS10 378 aa21.45■■□□□ 1.02
SFXN1-208ENST00000507823 KLHDC4Q8TBB5 520 aa21.45■■□□□ 1.02
SFXN1-208ENST00000507823 CDCA7Q9BWT1 371 aaPredicted RBP21.45■■□□□ 1.02
SFXN1-208ENST00000507823 HSP90AA1P07900 732 aaKnown RBP21.44■■□□□ 1.02
SFXN1-208ENST00000507823 RUFY2Q8WXA3 655 aa21.43■■□□□ 1.02
SFXN1-208ENST00000507823 SIL1Q9H173 461 aa21.43■■□□□ 1.02
SFXN1-208ENST00000507823 CWC22Q9HCG8 908 aaKnown RBP21.43■■□□□ 1.02
SFXN1-208ENST00000507823 TNPO1Q92973 898 aaKnown RBP21.43■■□□□ 1.02
SFXN1-208ENST00000507823 THRAP3Q9Y2W1 955 aaKnown RBP21.43■■□□□ 1.02
SFXN1-208ENST00000507823 JARID2Q92833 1246 aaPredicted RBP21.42■■□□□ 1.02
SFXN1-208ENST00000507823 TLR7Q9NYK1 1049 aaKnown RBP21.42■■□□□ 1.02
SFXN1-208ENST00000507823 NWD2Q9ULI1 1742 aa21.42■■□□□ 1.02
SFXN1-208ENST00000507823 HIP1O00291 1037 aa21.42■■□□□ 1.02
SFXN1-208ENST00000507823 EXOC5O00471 708 aa21.42■■□□□ 1.02
SFXN1-208ENST00000507823 TCIRG1Q13488 830 aa21.42■■□□□ 1.02
SFXN1-208ENST00000507823 DNAJC10Q8IXB1 793 aa21.42■■□□□ 1.02
SFXN1-208ENST00000507823 CCDC8Q9H0W5 538 aaPredicted RBP21.42■■□□□ 1.02
SFXN1-208ENST00000507823 TNNI3KQ59H18 835 aa21.42■■□□□ 1.02
SFXN1-208ENST00000507823 LMBR1LQ6UX01 489 aa21.42■■□□□ 1.02
SFXN1-208ENST00000507823 FPGT-TNNI3KV9GXZ4 949 aa21.42■■□□□ 1.02
SFXN1-208ENST00000507823 DDX11L8A8MPP1 907 aa21.41■■□□□ 1.02
SFXN1-208ENST00000507823 STARD3NLO95772 234 aa21.41■■□□□ 1.02
SFXN1-208ENST00000507823 KCNB2Q92953 911 aa21.41■■□□□ 1.02
SFXN1-208ENST00000507823 ZBTB3Q9H5J0 574 aa21.41■■□□□ 1.02
SFXN1-208ENST00000507823 CYP2E1P05181 493 aaPredicted RBP21.41■■□□□ 1.02
SFXN1-208ENST00000507823 NEK4P51957 841 aa21.41■■□□□ 1.02
SFXN1-208ENST00000507823 GPR108Q9NPR9 543 aa21.41■■□□□ 1.02
SFXN1-208ENST00000507823 DIAPH3Q9NSV4 1193 aa21.41■■□□□ 1.02
SFXN1-208ENST00000507823 SPATA31A1Q5TZJ5 1347 aa21.4■■□□□ 1.02
SFXN1-208ENST00000507823 ATP5JP18859 108 aa21.4■■□□□ 1.02
SFXN1-208ENST00000507823 CUL4AQ13619 759 aa21.4■■□□□ 1.02
SFXN1-208ENST00000507823 DOT1LQ8TEK3 1739 aa21.4■■□□□ 1.02
SFXN1-208ENST00000507823 RFX7Q2KHR2 1363 aa21.4■■□□□ 1.02
SFXN1-208ENST00000507823 CICQ96RK0 1608 aaPredicted RBP21.39■■□□□ 1.02
SFXN1-208ENST00000507823 TFCP2Q12800 502 aa21.39■■□□□ 1.01
SFXN1-208ENST00000507823 CWC27Q6UX04 472 aaKnown RBP21.39■■□□□ 1.01
SFXN1-208ENST00000507823 SLC4A9Q96Q91 983 aa21.39■■□□□ 1.01
SFXN1-208ENST00000507823 PLA2G12BQ9BX93 195 aa21.39■■□□□ 1.01
SFXN1-208ENST00000507823 DBNLQ9UJU6 430 aaKnown RBP21.39■■□□□ 1.01
SFXN1-208ENST00000507823 ATG9AQ7Z3C6 839 aa21.38■■□□□ 1.01
SFXN1-208ENST00000507823 GBP4Q96PP9 640 aa21.38■■□□□ 1.01
SFXN1-208ENST00000507823 ANKRD36CQ5JPF3 1778 aa21.38■■□□□ 1.01
SFXN1-208ENST00000507823 CYP19A1P11511 503 aaPredicted RBP21.38■■□□□ 1.01
SFXN1-208ENST00000507823 NUCB2P80303 420 aa21.38■■□□□ 1.01
SFXN1-208ENST00000507823 KIAA1211Q6ZU35 1233 aa21.37■■□□□ 1.01
SFXN1-208ENST00000507823 TMX3Q96JJ7 454 aa21.37■■□□□ 1.01
SFXN1-208ENST00000507823 FOXD4L1Q9NU39 408 aa21.37■■□□□ 1.01
SFXN1-208ENST00000507823 SNX14Q9Y5W7 946 aa21.37■■□□□ 1.01
SFXN1-208ENST00000507823 MAP3K15Q6ZN16 1313 aa21.37■■□□□ 1.01
SFXN1-208ENST00000507823 CIAO1O76071 339 aa21.37■■□□□ 1.01
SFXN1-208ENST00000507823 JCADQ9P266 1359 aa21.37■■□□□ 1.01
SFXN1-208ENST00000507823 SLIT2O94813 1529 aa21.36■■□□□ 1.01
SFXN1-208ENST00000507823 PCCAP05165 728 aaPredicted RBP21.36■■□□□ 1.01
SFXN1-208ENST00000507823 KIF6Q6ZMV9 814 aa21.36■■□□□ 1.01
SFXN1-208ENST00000507823 TICAM2Q86XR7 235 aa21.36■■□□□ 1.01
SFXN1-208ENST00000507823 INTS4Q96HW7 963 aaKnown RBP21.36■■□□□ 1.01
SFXN1-208ENST00000507823 FBXO3Q9UK99 471 aa21.36■■□□□ 1.01
SFXN1-208ENST00000507823 MED23Q9ULK4 1368 aa21.35■■□□□ 1.01
SFXN1-208ENST00000507823 PTMSP20962 102 aa21.35■■□□□ 1.01
SFXN1-208ENST00000507823 GIGYF2Q6Y7W6 1299 aaKnown RBP21.35■■□□□ 1.01
SFXN1-208ENST00000507823 RREB1Q92766 1687 aa21.35■■□□□ 1.01
SFXN1-208ENST00000507823 IL15P40933 162 aaPredicted RBP21.35■■□□□ 1.01
SFXN1-208ENST00000507823 BOLA2Q9H3K6 86 aa21.35■■□□□ 1.01
SFXN1-208ENST00000507823 TTC14Q96N46 770 aa21.34■■□□□ 1.01
SFXN1-208ENST00000507823 SSFA2P28290 1259 aa21.34■■□□□ 1.01
SFXN1-208ENST00000507823 SPATA31A5Q5VU36 1347 aa21.34■■□□□ 1.01
SFXN1-208ENST00000507823 CCDC171Q6TFL3 1326 aa21.34■■□□□ 1.01
SFXN1-208ENST00000507823 SPATA31A7Q8IWB4 1347 aa21.34■■□□□ 1.01
SFXN1-208ENST00000507823 CDHR2Q9BYE9 1310 aa21.34■■□□□ 1.01
SFXN1-208ENST00000507823 EYA2O00167 538 aa21.33■■□□□ 1
SFXN1-208ENST00000507823 PTH1RQ03431 593 aa21.33■■□□□ 1
SFXN1-208ENST00000507823 RASEFQ8IZ41 740 aa21.33■■□□□ 1
SFXN1-208ENST00000507823 TM6SF1Q9BZW5 370 aa21.33■■□□□ 1
SFXN1-208ENST00000507823 CSF1RP07333 972 aa21.32■■□□□ 1
SFXN1-208ENST00000507823 NMIQ13287 307 aaPredicted RBP21.32■■□□□ 1
SFXN1-208ENST00000507823 NECTIN1Q15223 517 aa21.32■■□□□ 1
SFXN1-208ENST00000507823 HSP90AB3PQ58FF7 597 aa21.32■■□□□ 1
SFXN1-208ENST00000507823 BARGINQ6ZT62 677 aa21.32■■□□□ 1
SFXN1-208ENST00000507823 ZGPATQ8N5A5 531 aaKnown RBP21.32■■□□□ 1
SFXN1-208ENST00000507823 ZBTB38Q8NAP3 1195 aaPredicted RBP21.32■■□□□ 1
SFXN1-208ENST00000507823 HAUS7Q99871 368 aa21.32■■□□□ 1
SFXN1-208ENST00000507823 ZNF609O15014 1411 aa21.32■■□□□ 1
SFXN1-208ENST00000507823 TRAK2O60296 914 aa21.32■■□□□ 1
SFXN1-208ENST00000507823 MAP4K1Q92918 833 aa21.32■■□□□ 1
SFXN1-208ENST00000507823 DBNDD2Q9BQY9 259 aa21.31■■□□□ 1
SFXN1-208ENST00000507823 NUP98P52948 1817 aa21.31■■□□□ 1
SFXN1-208ENST00000507823 SPEF2Q9C093 1822 aa21.31■■□□□ 1
SFXN1-208ENST00000507823 FAM227BQ96M60 508 aa21.31■■□□□ 1
SFXN1-208ENST00000507823 ERVV-1B6SEH8 477 aa21.3■■□□□ 1
SFXN1-208ENST00000507823 IL6STP40189 918 aaPredicted RBP21.3■■□□□ 1
SFXN1-208ENST00000507823 PRIM1P49642 420 aaKnown RBP21.3■■□□□ 1
SFXN1-208ENST00000507823 FSD1Q9BTV5 496 aa21.3■■□□□ 1
SFXN1-208ENST00000507823 UPF3BQ9BZI7 483 aaKnown RBP21.3■■□□□ 1
SFXN1-208ENST00000507823 DDB1Q16531 1140 aa21.29■■□□□ 1
SFXN1-208ENST00000507823 A0A0D9SFI3 127 aa21.29■■□□□ 1
SFXN1-208ENST00000507823 ADAMTS2O95450 1211 aa21.29■■□□□ 1
SFXN1-208ENST00000507823 ZBTB1Q9Y2K1 713 aa21.29■■□□□ 1
SFXN1-208ENST00000507823 BAG4O95429 457 aaKnown RBP21.28■■□□□ 1
SFXN1-208ENST00000507823 NLRP10Q86W26 655 aa21.28■■□□□ 1
SFXN1-208ENST00000507823 CHMP3Q9Y3E7 222 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms