RNA–Protein interactions for RNA: ENST00000506334.1

ARHGEF28-207, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-207ENST00000506334 CCDC93Q567U6 631 aa10.63□□□□□ -0.71
ARHGEF28-207ENST00000506334 IFNLR1Q8IU57 520 aaPredicted RBP10.63□□□□□ -0.71
ARHGEF28-207ENST00000506334 RTKN2Q8IZC4 609 aa10.63□□□□□ -0.71
ARHGEF28-207ENST00000506334 CNBD1Q8NA66 436 aa10.63□□□□□ -0.71
ARHGEF28-207ENST00000506334 SLAIN1Q8ND83 568 aa10.63□□□□□ -0.71
ARHGEF28-207ENST00000506334 KLRG2A4D1S0 409 aaPredicted RBP10.62□□□□□ -0.71
ARHGEF28-207ENST00000506334 CCDC85CA6NKD9 419 aa10.62□□□□□ -0.71
ARHGEF28-207ENST00000506334 FZD9O00144 591 aa10.62□□□□□ -0.71
ARHGEF28-207ENST00000506334 NPR1P16066 1061 aa10.62□□□□□ -0.71
ARHGEF28-207ENST00000506334 FKBP4Q02790 459 aaKnown RBP eCLIP10.62□□□□□ -0.71
ARHGEF28-207ENST00000506334 ZNF790Q6PG37 636 aa10.62□□□□□ -0.71
ARHGEF28-207ENST00000506334 CLEC4GQ6UXB4 293 aa10.62□□□□□ -0.71
ARHGEF28-207ENST00000506334 BEGAINQ9BUH8 593 aa10.62□□□□□ -0.71
ARHGEF28-207ENST00000506334 SCN4AP35499 1836 aa10.62□□□□□ -0.71
ARHGEF28-207ENST00000506334 CAMTA2O94983 1202 aa10.61□□□□□ -0.71
ARHGEF28-207ENST00000506334 HMOX1P09601 288 aa10.61□□□□□ -0.71
ARHGEF28-207ENST00000506334 ALDH1B1P30837 517 aa10.61□□□□□ -0.71
ARHGEF28-207ENST00000506334 ECE1P42892 770 aa10.61□□□□□ -0.71
ARHGEF28-207ENST00000506334 MAP1SQ66K74 1059 aaPredicted RBP10.61□□□□□ -0.71
ARHGEF28-207ENST00000506334 ZNF496Q96IT1 587 aaPredicted RBP10.61□□□□□ -0.71
ARHGEF28-207ENST00000506334 DDX21Q9NR30 783 aaKnown RBP eCLIP10.61□□□□□ -0.71
ARHGEF28-207ENST00000506334 ABT1Q9ULW3 272 aaKnown RBP10.61□□□□□ -0.71
ARHGEF28-207ENST00000506334 ZNF330Q9Y3S2 320 aaPredicted RBP10.61□□□□□ -0.71
ARHGEF28-207ENST00000506334 KNSTRNQ9Y448 316 aa10.61□□□□□ -0.71
ARHGEF28-207ENST00000506334 A1BGP04217 495 aa10.6□□□□□ -0.71
ARHGEF28-207ENST00000506334 TEFQ10587 303 aa10.6□□□□□ -0.71
ARHGEF28-207ENST00000506334 TPTE2Q6XPS3 522 aa10.6□□□□□ -0.71
ARHGEF28-207ENST00000506334 NBPF5PQ86XG9 351 aaPredicted RBP10.6□□□□□ -0.71
ARHGEF28-207ENST00000506334 GPC2Q8N158 579 aa10.6□□□□□ -0.71
ARHGEF28-207ENST00000506334 SYNE4Q8N205 404 aa10.6□□□□□ -0.71
ARHGEF28-207ENST00000506334 GPR101Q96P66 508 aaPredicted RBP10.6□□□□□ -0.71
ARHGEF28-207ENST00000506334 ZNF277Q9NRM2 450 aaPredicted RBP10.6□□□□□ -0.71
ARHGEF28-207ENST00000506334 HEG1Q9ULI3 1381 aa10.6□□□□□ -0.71
ARHGEF28-207ENST00000506334 VIRMAQ69YN4 1812 aaKnown RBP10.6□□□□□ -0.71
ARHGEF28-207ENST00000506334 SLX4Q8IY92 1834 aa10.6□□□□□ -0.71
ARHGEF28-207ENST00000506334 PYGBP11216 843 aa10.59□□□□□ -0.71
ARHGEF28-207ENST00000506334 IARSP41252 1262 aaKnown RBP10.59□□□□□ -0.71
ARHGEF28-207ENST00000506334 DZIP3Q86Y13 1208 aaKnown RBP10.59□□□□□ -0.71
ARHGEF28-207ENST00000506334 IL17REQ8NFR9 667 aa10.59□□□□□ -0.71
ARHGEF28-207ENST00000506334 JDP2Q8WYK2 163 aa10.59□□□□□ -0.71
ARHGEF28-207ENST00000506334 FMNL2Q96PY5 1086 aa10.59□□□□□ -0.71
ARHGEF28-207ENST00000506334 MRC1P22897 1456 aa10.59□□□□□ -0.71
ARHGEF28-207ENST00000506334 ANKRD31Q8N7Z5 1873 aa10.59□□□□□ -0.71
ARHGEF28-207ENST00000506334 ZNF541Q9H0D2 1346 aa10.58□□□□□ -0.71
ARHGEF28-207ENST00000506334 GNAT3A8MTJ3 354 aa10.58□□□□□ -0.72
ARHGEF28-207ENST00000506334 RGL2O15211 777 aa10.58□□□□□ -0.72
ARHGEF28-207ENST00000506334 MAP2K2P36507 400 aa10.58□□□□□ -0.72
ARHGEF28-207ENST00000506334 IRX5P78411 483 aaPredicted RBP10.58□□□□□ -0.72
ARHGEF28-207ENST00000506334 CAPNS2Q96L46 248 aa10.58□□□□□ -0.72
ARHGEF28-207ENST00000506334 RNF123Q5XPI4 1314 aa10.58□□□□□ -0.72
ARHGEF28-207ENST00000506334 DIAPH1O60610 1272 aaKnown RBP10.57□□□□□ -0.72
ARHGEF28-207ENST00000506334 EIF6P56537 245 aaKnown RBP10.57□□□□□ -0.72
ARHGEF28-207ENST00000506334 EIF4G2P78344 907 aaKnown RBP eCLIP10.57□□□□□ -0.72
ARHGEF28-207ENST00000506334 GRIPAP1Q4V328 841 aa10.57□□□□□ -0.72
ARHGEF28-207ENST00000506334 PSMD1Q99460 953 aa10.57□□□□□ -0.72
ARHGEF28-207ENST00000506334 OCEL1Q9H607 264 aa10.57□□□□□ -0.72
ARHGEF28-207ENST00000506334 ZNF652Q9Y2D9 606 aa10.57□□□□□ -0.72
ARHGEF28-207ENST00000506334 USP16Q9Y5T5 823 aa10.57□□□□□ -0.72
ARHGEF28-207ENST00000506334 CA12O43570 354 aa10.56□□□□□ -0.72
ARHGEF28-207ENST00000506334 LMOD1P29536 600 aaPredicted RBP10.56□□□□□ -0.72
ARHGEF28-207ENST00000506334 CST9Q5W186 159 aa10.56□□□□□ -0.72
ARHGEF28-207ENST00000506334 CC2D2BQ6DHV5 1058 aa10.56□□□□□ -0.72
ARHGEF28-207ENST00000506334 CYP4F22Q6NT55 531 aa10.56□□□□□ -0.72
ARHGEF28-207ENST00000506334 USP50Q70EL3 339 aaPredicted RBP10.56□□□□□ -0.72
ARHGEF28-207ENST00000506334 GAS2L2Q8NHY3 880 aa10.56□□□□□ -0.72
ARHGEF28-207ENST00000506334 TLL2Q9Y6L7 1015 aa10.56□□□□□ -0.72
ARHGEF28-207ENST00000506334 BTBD11A6QL63 1104 aa10.55□□□□□ -0.72
ARHGEF28-207ENST00000506334 AMER1Q5JTC6 1135 aaPredicted RBP10.55□□□□□ -0.72
ARHGEF28-207ENST00000506334 OLFM4Q6UX06 510 aa10.55□□□□□ -0.72
ARHGEF28-207ENST00000506334 PAXIP1Q6ZW49 1069 aaPredicted RBP10.55□□□□□ -0.72
ARHGEF28-207ENST00000506334 CDAN1Q8IWY9 1227 aa10.55□□□□□ -0.72
ARHGEF28-207ENST00000506334 GJA3Q9Y6H8 435 aa10.55□□□□□ -0.72
ARHGEF28-207ENST00000506334 HSPA5P11021 654 aaKnown RBP10.54□□□□□ -0.72
ARHGEF28-207ENST00000506334 GTF2E1P29083 439 aaPredicted RBP10.54□□□□□ -0.72
ARHGEF28-207ENST00000506334 EPS15P42566 896 aa10.54□□□□□ -0.72
ARHGEF28-207ENST00000506334 HHIPL1Q96JK4 782 aa10.54□□□□□ -0.72
ARHGEF28-207ENST00000506334 NIP7Q9Y221 180 aaKnown RBP eCLIP10.54□□□□□ -0.72
ARHGEF28-207ENST00000506334 ADAMTSL1Q8N6G6 1762 aa10.54□□□□□ -0.72
ARHGEF28-207ENST00000506334 COL11A2P13942 1736 aaPredicted RBP10.53□□□□□ -0.72
ARHGEF28-207ENST00000506334 UBR2Q8IWV8 1755 aa10.53□□□□□ -0.72
ARHGEF28-207ENST00000506334 KCNQ3O43525 872 aa10.53□□□□□ -0.72
ARHGEF28-207ENST00000506334 SNRPA1P09661 255 aaKnown RBP10.53□□□□□ -0.72
ARHGEF28-207ENST00000506334 FMR1Q06787 632 aaKnown RBP eCLIP10.53□□□□□ -0.72
ARHGEF28-207ENST00000506334 GRM1Q13255 1194 aa10.53□□□□□ -0.72
ARHGEF28-207ENST00000506334 MCOLN1Q9GZU1 580 aa10.53□□□□□ -0.72
ARHGEF28-207ENST00000506334 ST18O60284 1047 aa10.52□□□□□ -0.73
ARHGEF28-207ENST00000506334 AOC2O75106 756 aa10.52□□□□□ -0.73
ARHGEF28-207ENST00000506334 SCNN1DP51172 638 aa10.52□□□□□ -0.73
ARHGEF28-207ENST00000506334 CRY2Q49AN0 593 aa10.52□□□□□ -0.73
ARHGEF28-207ENST00000506334 SAPCD2Q86UD0 394 aa10.52□□□□□ -0.73
ARHGEF28-207ENST00000506334 CFAP44Q96MT7 982 aa10.52□□□□□ -0.73
ARHGEF28-207ENST00000506334 VPS33BQ9H267 617 aa10.52□□□□□ -0.73
ARHGEF28-207ENST00000506334 PCDHB8Q9UN66 801 aa10.52□□□□□ -0.73
ARHGEF28-207ENST00000506334 ARFGEF2Q9Y6D5 1785 aa10.52□□□□□ -0.73
ARHGEF28-207ENST00000506334 FAM177BA6PVY3 158 aa10.51□□□□□ -0.73
ARHGEF28-207ENST00000506334 TRAF5O00463 557 aa10.51□□□□□ -0.73
ARHGEF28-207ENST00000506334 HOXA10P31260 410 aaPredicted RBP10.51□□□□□ -0.73
ARHGEF28-207ENST00000506334 PIP4K2AP48426 406 aaPredicted RBP10.51□□□□□ -0.73
ARHGEF28-207ENST00000506334 BRPF1P55201 1214 aaPredicted RBP10.51□□□□□ -0.73
ARHGEF28-207ENST00000506334 GSE1Q14687 1217 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms