RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 KSR2Q6VAB6 950 aa11.77□□□□□ -0.53
TPM3-218ENST00000505010 COPS6Q7L5N1 327 aa11.77□□□□□ -0.53
TPM3-218ENST00000505010 LRP10Q7Z4F1 713 aa11.77□□□□□ -0.53
TPM3-218ENST00000505010 RIC3Q7Z5B4 369 aa11.77□□□□□ -0.53
TPM3-218ENST00000505010 ZBTB40Q9NUA8 1239 aa11.77□□□□□ -0.53
TPM3-218ENST00000505010 RNF181Q9P0P0 153 aa11.77□□□□□ -0.53
TPM3-218ENST00000505010 RTCBQ9Y3I0 505 aaKnown RBP11.77□□□□□ -0.53
TPM3-218ENST00000505010 ZNF330Q9Y3S2 320 aaPredicted RBP11.77□□□□□ -0.53
TPM3-218ENST00000505010 PARP3Q9Y6F1 533 aa11.77□□□□□ -0.53
TPM3-218ENST00000505010 ZBTB7BO15156 539 aaPredicted RBP11.76□□□□□ -0.53
TPM3-218ENST00000505010 CYP19A1P11511 503 aaPredicted RBP11.76□□□□□ -0.53
TPM3-218ENST00000505010 DALRD3Q5D0E6 543 aaKnown RBP11.76□□□□□ -0.53
TPM3-218ENST00000505010 SRCIN1Q9C0H9 1055 aa11.76□□□□□ -0.53
TPM3-218ENST00000505010 C1orf115Q9H7X2 142 aa11.76□□□□□ -0.53
TPM3-218ENST00000505010 BCORQ6W2J9 1755 aa11.76□□□□□ -0.53
TPM3-218ENST00000505010 NUP98P52948 1817 aa11.76□□□□□ -0.53
TPM3-218ENST00000505010 KIF13BQ9NQT8 1826 aa11.75□□□□□ -0.53
TPM3-218ENST00000505010 KCNA3P22001 575 aa11.75□□□□□ -0.53
TPM3-218ENST00000505010 RFC4P35249 363 aa11.75□□□□□ -0.53
TPM3-218ENST00000505010 MEIS3Q99687 375 aa11.75□□□□□ -0.53
TPM3-218ENST00000505010 PCDHB15Q9Y5E8 787 aa11.75□□□□□ -0.53
TPM3-218ENST00000505010 C10orf71Q711Q0 1435 aa11.75□□□□□ -0.53
TPM3-218ENST00000505010 BEND3Q5T5X7 828 aa11.74□□□□□ -0.53
TPM3-218ENST00000505010 KIF6Q6ZMV9 814 aa11.74□□□□□ -0.53
TPM3-218ENST00000505010 TTLL7Q6ZT98 887 aa11.74□□□□□ -0.53
TPM3-218ENST00000505010 ANKRD13DQ6ZTN6 518 aa11.74□□□□□ -0.53
TPM3-218ENST00000505010 ARHGEF1Q92888 912 aaKnown RBP11.74□□□□□ -0.53
TPM3-218ENST00000505010 ZBTB1Q9Y2K1 713 aa11.74□□□□□ -0.53
TPM3-218ENST00000505010 SLC34A2O95436 690 aa11.73□□□□□ -0.53
TPM3-218ENST00000505010 GYS1P13807 737 aa11.73□□□□□ -0.53
TPM3-218ENST00000505010 VEGFAP15692 232 aaPredicted RBP11.73□□□□□ -0.53
TPM3-218ENST00000505010 ADRA2BP18089 450 aa11.73□□□□□ -0.53
TPM3-218ENST00000505010 CRKLP46109 303 aaKnown RBP11.73□□□□□ -0.53
TPM3-218ENST00000505010 SCN7AQ01118 1682 aa11.73□□□□□ -0.53
TPM3-218ENST00000505010 NEXNQ0ZGT2 675 aa11.73□□□□□ -0.53
TPM3-218ENST00000505010 CENPQQ7L2Z9 268 aaPredicted RBP11.73□□□□□ -0.53
TPM3-218ENST00000505010 PLBD2Q8NHP8 589 aa11.73□□□□□ -0.53
TPM3-218ENST00000505010 MYD88Q99836 296 aa11.73□□□□□ -0.53
TPM3-218ENST00000505010 ZBTB3Q9H5J0 574 aa11.73□□□□□ -0.53
TPM3-218ENST00000505010 KIAA1551Q9HCM1 1747 aa11.73□□□□□ -0.53
TPM3-218ENST00000505010 C4AP0C0L4 1744 aa11.72□□□□□ -0.53
TPM3-218ENST00000505010 ALDH1L1O75891 902 aa11.72□□□□□ -0.53
TPM3-218ENST00000505010 GNAI3P08754 354 aa11.72□□□□□ -0.53
TPM3-218ENST00000505010 IL6STP40189 918 aaPredicted RBP11.72□□□□□ -0.53
TPM3-218ENST00000505010 CWF19L2Q2TBE0 894 aaKnown RBP11.72□□□□□ -0.53
TPM3-218ENST00000505010 NPM2Q86SE8 214 aaKnown RBP11.72□□□□□ -0.53
TPM3-218ENST00000505010 LINS1Q8NG48 757 aa11.72□□□□□ -0.53
TPM3-218ENST00000505010 METTL22Q9BUU2 404 aaPredicted RBP11.72□□□□□ -0.53
TPM3-218ENST00000505010 IGHDP01880 384 aa11.71□□□□□ -0.53
TPM3-218ENST00000505010 UBTFL1P0CB47 393 aaPredicted RBP11.71□□□□□ -0.53
TPM3-218ENST00000505010 RC3H1Q5TC82 1133 aaKnown RBP11.71□□□□□ -0.53
TPM3-218ENST00000505010 INTS5Q6P9B9 1019 aaKnown RBP11.71□□□□□ -0.53
TPM3-218ENST00000505010 RWDD1Q9H446 243 aaPredicted RBP11.71□□□□□ -0.53
TPM3-218ENST00000505010 COL15A1P39059 1388 aa11.7□□□□□ -0.54
TPM3-218ENST00000505010 CNTNAP4Q9C0A0 1308 aa11.7□□□□□ -0.54
TPM3-218ENST00000505010 ZC3H4Q9UPT8 1303 aaKnown RBP11.7□□□□□ -0.54
TPM3-218ENST00000505010 GLTPD2A6NH11 291 aa11.7□□□□□ -0.54
TPM3-218ENST00000505010 NEURL1BA8MQ27 555 aa11.7□□□□□ -0.54
TPM3-218ENST00000505010 RPS6KA4O75676 772 aa11.7□□□□□ -0.54
TPM3-218ENST00000505010 GNAI2P04899 355 aa11.7□□□□□ -0.54
TPM3-218ENST00000505010 C9orf78Q9NZ63 289 aaPredicted RBP11.7□□□□□ -0.54
TPM3-218ENST00000505010 LRRFIP2Q9Y608 721 aaKnown RBP11.7□□□□□ -0.54
TPM3-218ENST00000505010 TNRC6CQ9HCJ0 1690 aaKnown RBP11.69□□□□□ -0.54
TPM3-218ENST00000505010 MAP3K15Q6ZN16 1313 aa11.69□□□□□ -0.54
TPM3-218ENST00000505010 ATP5J2-PTCD1G3V325 749 aa11.69□□□□□ -0.54
TPM3-218ENST00000505010 IGKV5-2P06315 115 aa11.69□□□□□ -0.54
TPM3-218ENST00000505010 HDAC1Q13547 482 aaPredicted RBP11.69□□□□□ -0.54
TPM3-218ENST00000505010 DZIP3Q86Y13 1208 aaKnown RBP11.69□□□□□ -0.54
TPM3-218ENST00000505010 USP44Q9H0E7 712 aa11.69□□□□□ -0.54
TPM3-218ENST00000505010 ARFGEF1Q9Y6D6 1849 aa11.69□□□□□ -0.54
TPM3-218ENST00000505010 IBTKQ9P2D0 1353 aaPredicted RBP11.68□□□□□ -0.54
TPM3-218ENST00000505010 BRCA1P38398 1863 aaKnown RBP11.68□□□□□ -0.54
TPM3-218ENST00000505010 GRM8O00222 908 aa11.68□□□□□ -0.54
TPM3-218ENST00000505010 NBPF7P0C2Y1 421 aaPredicted RBP11.68□□□□□ -0.54
TPM3-218ENST00000505010 LMNB1P20700 586 aa11.68□□□□□ -0.54
TPM3-218ENST00000505010 CHRNA5P30532 468 aa11.68□□□□□ -0.54
TPM3-218ENST00000505010 EIF5P55010 431 aaKnown RBP11.68□□□□□ -0.54
TPM3-218ENST00000505010 CEP85Q6P2H3 762 aa11.68□□□□□ -0.54
TPM3-218ENST00000505010 ANKRD44Q8N8A2 993 aa11.68□□□□□ -0.54
TPM3-218ENST00000505010 TBC1D2BQ9UPU7 963 aa11.68□□□□□ -0.54
TPM3-218ENST00000505010 MYH3P11055 1940 aa11.68□□□□□ -0.54
TPM3-218ENST00000505010 GCKRQ14397 625 aa11.67□□□□□ -0.54
TPM3-218ENST00000505010 RPAP2Q8IXW5 612 aaPredicted RBP11.67□□□□□ -0.54
TPM3-218ENST00000505010 CWC25Q9NXE8 425 aaPredicted RBP11.67□□□□□ -0.54
TPM3-218ENST00000505010 LAMB2P55268 1798 aa11.67□□□□□ -0.54
TPM3-218ENST00000505010 A0A087WZG4 1122 aa11.66□□□□□ -0.54
TPM3-218ENST00000505010 HMMRO75330 724 aa11.66□□□□□ -0.54
TPM3-218ENST00000505010 RASSF7Q02833 373 aa11.66□□□□□ -0.54
TPM3-218ENST00000505010 TCIRG1Q13488 830 aa11.66□□□□□ -0.54
TPM3-218ENST00000505010 HSP90AB3PQ58FF7 597 aa11.66□□□□□ -0.54
TPM3-218ENST00000505010 SIRT2Q8IXJ6 389 aa11.66□□□□□ -0.54
TPM3-218ENST00000505010 HDAC5Q9UQL6 1122 aa11.66□□□□□ -0.54
TPM3-218ENST00000505010 SBF1O95248 1867 aa11.66□□□□□ -0.54
TPM3-218ENST00000505010 UTYO14607 1347 aa11.65□□□□□ -0.54
TPM3-218ENST00000505010 ERVV-1B6SEH8 477 aa11.65□□□□□ -0.54
TPM3-218ENST00000505010 DDR1Q08345 913 aa11.65□□□□□ -0.54
TPM3-218ENST00000505010 HLFQ16534 295 aa11.65□□□□□ -0.54
TPM3-218ENST00000505010 DPY19L2Q6NUT2 758 aa11.65□□□□□ -0.54
TPM3-218ENST00000505010 GIGYF2Q6Y7W6 1299 aaKnown RBP11.65□□□□□ -0.54
TPM3-218ENST00000505010 UBE3BQ7Z3V4 1068 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms