RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 WWC3Q9ULE0 1092 aa10.58□□□□□ -0.72
RFC1-207ENST00000504554 NBPF26B4DH59 902 aa10.57□□□□□ -0.72
RFC1-207ENST00000504554 STARD3NLO95772 234 aa10.57□□□□□ -0.72
RFC1-207ENST00000504554 NBPF10Q6P3W6 841 aaKnown RBP10.57□□□□□ -0.72
RFC1-207ENST00000504554 NBPF15Q8N660 670 aa10.57□□□□□ -0.72
RFC1-207ENST00000504554 NARFQ9UHQ1 456 aa10.57□□□□□ -0.72
RFC1-207ENST00000504554 DLG5Q8TDM6 1919 aa10.56□□□□□ -0.72
RFC1-207ENST00000504554 POLRMTO00411 1230 aaKnown RBP10.56□□□□□ -0.72
RFC1-207ENST00000504554 NEFMP07197 916 aa10.56□□□□□ -0.72
RFC1-207ENST00000504554 SNRPA1P09661 255 aaKnown RBP10.56□□□□□ -0.72
RFC1-207ENST00000504554 EIF4A1P60842 406 aaKnown RBP10.56□□□□□ -0.72
RFC1-207ENST00000504554 NFIXQ14938 502 aa10.56□□□□□ -0.72
RFC1-207ENST00000504554 WDR43Q15061 677 aaKnown RBP eCLIP10.56□□□□□ -0.72
RFC1-207ENST00000504554 NEUROD2Q15784 382 aa10.56□□□□□ -0.72
RFC1-207ENST00000504554 GPR162Q16538 588 aa10.56□□□□□ -0.72
RFC1-207ENST00000504554 RUNDC1Q96C34 613 aa10.56□□□□□ -0.72
RFC1-207ENST00000504554 TEX13AQ9BXU3 409 aaPredicted RBP10.56□□□□□ -0.72
RFC1-207ENST00000504554 PNNQ9H307 717 aaKnown RBP10.56□□□□□ -0.72
RFC1-207ENST00000504554 TBC1D2BQ9UPU7 963 aa10.56□□□□□ -0.72
RFC1-207ENST00000504554 C10orf71Q711Q0 1435 aa10.56□□□□□ -0.72
RFC1-207ENST00000504554 ZPR1O75312 459 aa10.55□□□□□ -0.72
RFC1-207ENST00000504554 NBR1Q14596 966 aa10.55□□□□□ -0.72
RFC1-207ENST00000504554 TPRNQ4KMQ1 711 aa10.55□□□□□ -0.72
RFC1-207ENST00000504554 PXDNLA1KZ92 1463 aa10.55□□□□□ -0.72
RFC1-207ENST00000504554 SENP3-EIF4A1A0A087X0R7 540 aa10.54□□□□□ -0.72
RFC1-207ENST00000504554 A0A0G2JLW4 131 aa10.54□□□□□ -0.72
RFC1-207ENST00000504554 GIGYF1O75420 1035 aaPredicted RBP10.54□□□□□ -0.72
RFC1-207ENST00000504554 CAMTA2O94983 1202 aa10.54□□□□□ -0.72
RFC1-207ENST00000504554 KCNA3P22001 575 aa10.54□□□□□ -0.72
RFC1-207ENST00000504554 YY1P25490 414 aa10.54□□□□□ -0.72
RFC1-207ENST00000504554 IL6STP40189 918 aaPredicted RBP10.54□□□□□ -0.72
RFC1-207ENST00000504554 ZNF330Q9Y3S2 320 aaPredicted RBP10.54□□□□□ -0.72
RFC1-207ENST00000504554 PARP3Q9Y6F1 533 aa10.54□□□□□ -0.72
RFC1-207ENST00000504554 KIAA1551Q9HCM1 1747 aa10.53□□□□□ -0.72
RFC1-207ENST00000504554 KDM3BQ7LBC6 1761 aa10.53□□□□□ -0.72
RFC1-207ENST00000504554 PPP1R37O75864 691 aa10.53□□□□□ -0.72
RFC1-207ENST00000504554 DPEP1P16444 411 aa10.53□□□□□ -0.72
RFC1-207ENST00000504554 KRT24Q2M2I5 525 aa10.53□□□□□ -0.72
RFC1-207ENST00000504554 TBC1D9BQ66K14 1250 aa10.53□□□□□ -0.72
RFC1-207ENST00000504554 BICDL1Q6ZP65 573 aa10.53□□□□□ -0.72
RFC1-207ENST00000504554 PNISRQ8TF01 805 aaKnown RBP10.53□□□□□ -0.72
RFC1-207ENST00000504554 TSPYL4Q9UJ04 414 aa10.53□□□□□ -0.72
RFC1-207ENST00000504554 A0A087WZG4 1122 aa10.52□□□□□ -0.73
RFC1-207ENST00000504554 APAF1O14727 1248 aa10.52□□□□□ -0.73
RFC1-207ENST00000504554 CARMIL3Q8ND23 1372 aa10.52□□□□□ -0.73
RFC1-207ENST00000504554 CHL1O00533 1208 aa10.51□□□□□ -0.73
RFC1-207ENST00000504554 SERPINB2P05120 415 aa10.51□□□□□ -0.73
RFC1-207ENST00000504554 CHRNA5P30532 468 aa10.51□□□□□ -0.73
RFC1-207ENST00000504554 TGFB2P61812 414 aa10.51□□□□□ -0.73
RFC1-207ENST00000504554 DZIP3Q86Y13 1208 aaKnown RBP10.51□□□□□ -0.73
RFC1-207ENST00000504554 CCDC24Q8N4L8 307 aa10.51□□□□□ -0.73
RFC1-207ENST00000504554 KIF13BQ9NQT8 1826 aa10.51□□□□□ -0.73
RFC1-207ENST00000504554 PDIA6Q15084 440 aa10.5□□□□□ -0.73
RFC1-207ENST00000504554 HLFQ16534 295 aa10.5□□□□□ -0.73
RFC1-207ENST00000504554 PROSER3Q2NL68 480 aa10.5□□□□□ -0.73
RFC1-207ENST00000504554 LRP10Q7Z4F1 713 aa10.5□□□□□ -0.73
RFC1-207ENST00000504554 SCN7AQ01118 1682 aa10.5□□□□□ -0.73
RFC1-207ENST00000504554 ANP32CO43423 234 aa10.49□□□□□ -0.73
RFC1-207ENST00000504554 ANXA1P04083 346 aa10.49□□□□□ -0.73
RFC1-207ENST00000504554 LMOD3Q0VAK6 560 aa10.49□□□□□ -0.73
RFC1-207ENST00000504554 TTLL7Q6ZT98 887 aa10.49□□□□□ -0.73
RFC1-207ENST00000504554 NGEFQ8N5V2 710 aa10.49□□□□□ -0.73
RFC1-207ENST00000504554 BABAM1Q9NWV8 329 aa10.49□□□□□ -0.73
RFC1-207ENST00000504554 LAS1LQ9Y4W2 734 aaKnown RBP10.49□□□□□ -0.73
RFC1-207ENST00000504554 N4BP2Q86UW6 1770 aaPredicted RBP10.49□□□□□ -0.73
RFC1-207ENST00000504554 NRXN2Q9P2S2 1712 aa10.48□□□□□ -0.73
RFC1-207ENST00000504554 GRIN3BO60391 1043 aa10.48□□□□□ -0.73
RFC1-207ENST00000504554 NUDT7P0C024 238 aa10.48□□□□□ -0.73
RFC1-207ENST00000504554 ZNF853P0CG23 659 aa10.48□□□□□ -0.73
RFC1-207ENST00000504554 MYL6BP14649 208 aa10.48□□□□□ -0.73
RFC1-207ENST00000504554 EIF2S2P20042 333 aaKnown RBP10.48□□□□□ -0.73
RFC1-207ENST00000504554 PRR5LQ6MZQ0 368 aa10.48□□□□□ -0.73
RFC1-207ENST00000504554 TMC2Q8TDI7 906 aa10.48□□□□□ -0.73
RFC1-207ENST00000504554 NECTIN2Q92692 538 aa10.48□□□□□ -0.73
RFC1-207ENST00000504554 RNF166Q96A37 237 aaPredicted RBP10.48□□□□□ -0.73
RFC1-207ENST00000504554 MRS2Q9HD23 443 aa10.48□□□□□ -0.73
RFC1-207ENST00000504554 SLC34A2O95436 690 aa10.47□□□□□ -0.73
RFC1-207ENST00000504554 ZNF784Q8NCA9 323 aaPredicted RBP10.47□□□□□ -0.73
RFC1-207ENST00000504554 MBIPQ9NS73 344 aa10.47□□□□□ -0.73
RFC1-207ENST00000504554 BCS1LQ9Y276 419 aa10.47□□□□□ -0.73
RFC1-207ENST00000504554 LAMB4A4D0S4 1761 aa10.47□□□□□ -0.73
RFC1-207ENST00000504554 BCORQ6W2J9 1755 aa10.47□□□□□ -0.73
RFC1-207ENST00000504554 AFDNP55196 1824 aaKnown RBP10.47□□□□□ -0.73
RFC1-207ENST00000504554 CLEC4GQ6UXB4 293 aa10.46□□□□□ -0.73
RFC1-207ENST00000504554 PCDHGA4Q9Y5G9 962 aa10.46□□□□□ -0.73
RFC1-207ENST00000504554 MAP3K15Q6ZN16 1313 aa10.45□□□□□ -0.74
RFC1-207ENST00000504554 C2CD5Q86YS7 1000 aa10.45□□□□□ -0.74
RFC1-207ENST00000504554 SETDB2Q96T68 719 aa10.45□□□□□ -0.74
RFC1-207ENST00000504554 ZBTB3Q9H5J0 574 aa10.45□□□□□ -0.74
RFC1-207ENST00000504554 PIM2Q9P1W9 311 aa10.45□□□□□ -0.74
RFC1-207ENST00000504554 UBN2Q6ZU65 1347 aa10.44□□□□□ -0.74
RFC1-207ENST00000504554 FAM177BA6PVY3 158 aa10.44□□□□□ -0.74
RFC1-207ENST00000504554 DALRD3Q5D0E6 543 aaKnown RBP10.44□□□□□ -0.74
RFC1-207ENST00000504554 NPM2Q86SE8 214 aaKnown RBP10.44□□□□□ -0.74
RFC1-207ENST00000504554 IFT57Q9NWB7 429 aa10.44□□□□□ -0.74
RFC1-207ENST00000504554 NIP7Q9Y221 180 aaKnown RBP eCLIP10.44□□□□□ -0.74
RFC1-207ENST00000504554 ADCY9O60503 1353 aa10.43□□□□□ -0.74
RFC1-207ENST00000504554 BRCA1P38398 1863 aaKnown RBP10.43□□□□□ -0.74
RFC1-207ENST00000504554 ERBB4Q15303 1308 aa10.43□□□□□ -0.74
RFC1-207ENST00000504554 ERVV-1B6SEH8 477 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms