RNA–Protein interactions for RNA: ENST00000504524.5

PLXND1-204, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 1,701 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-204ENST00000504524 RFX5P48382 616 aaPredicted RBP22.68■■□□□ 1.22
PLXND1-204ENST00000504524 FOXO4P98177 505 aa22.68■■□□□ 1.22
PLXND1-204ENST00000504524 PDE1AP54750 535 aa22.68■■□□□ 1.22
PLXND1-204ENST00000504524 BCL11AQ9H165 835 aa22.68■■□□□ 1.22
PLXND1-204ENST00000504524 HSP90AB3PQ58FF7 597 aa22.67■■□□□ 1.22
PLXND1-204ENST00000504524 IL1RAPL2Q9NP60 686 aa22.67■■□□□ 1.22
PLXND1-204ENST00000504524 TBC1D2BQ9UPU7 963 aa22.67■■□□□ 1.22
PLXND1-204ENST00000504524 CNTNAP4Q9C0A0 1308 aa22.67■■□□□ 1.22
PLXND1-204ENST00000504524 CASZ1Q86V15 1759 aa22.66■■□□□ 1.22
PLXND1-204ENST00000504524 C4BP0C0L5 1744 aa22.66■■□□□ 1.22
PLXND1-204ENST00000504524 STAP2Q9UGK3 403 aa22.65■■□□□ 1.22
PLXND1-204ENST00000504524 C4AP0C0L4 1744 aa22.65■■□□□ 1.22
PLXND1-204ENST00000504524 DDX60Q8IY21 1712 aaKnown RBP22.65■■□□□ 1.22
PLXND1-204ENST00000504524 PCCAP05165 728 aaPredicted RBP22.65■■□□□ 1.22
PLXND1-204ENST00000504524 NPM2Q86SE8 214 aaKnown RBP22.65■■□□□ 1.22
PLXND1-204ENST00000504524 NLRP10Q86W26 655 aa22.65■■□□□ 1.22
PLXND1-204ENST00000504524 ARXQ96QS3 562 aa22.65■■□□□ 1.22
PLXND1-204ENST00000504524 COPRSQ9NQ92 184 aa22.65■■□□□ 1.22
PLXND1-204ENST00000504524 MX1P20591 662 aa22.64■■□□□ 1.21
PLXND1-204ENST00000504524 AOX1Q06278 1338 aa22.64■■□□□ 1.21
PLXND1-204ENST00000504524 CAMTA2O94983 1202 aa22.63■■□□□ 1.21
PLXND1-204ENST00000504524 ANP32AP39687 249 aaKnown RBP22.63■■□□□ 1.21
PLXND1-204ENST00000504524 KCNQ4P56696 695 aa22.63■■□□□ 1.21
PLXND1-204ENST00000504524 RTL5Q5HYW3 569 aaPredicted RBP22.63■■□□□ 1.21
PLXND1-204ENST00000504524 ERC1Q8IUD2 1116 aa22.63■■□□□ 1.21
PLXND1-204ENST00000504524 ZNF34Q8IZ26 560 aa22.63■■□□□ 1.21
PLXND1-204ENST00000504524 KLHDC4Q8TBB5 520 aa22.63■■□□□ 1.21
PLXND1-204ENST00000504524 SASH1O94885 1247 aa22.62■■□□□ 1.21
PLXND1-204ENST00000504524 GPTP24298 496 aa22.62■■□□□ 1.21
PLXND1-204ENST00000504524 PTPN12Q05209 780 aaKnown RBP22.62■■□□□ 1.21
PLXND1-204ENST00000504524 OS9Q13438 667 aaPredicted RBP22.62■■□□□ 1.21
PLXND1-204ENST00000504524 LMBR1LQ6UX01 489 aa22.62■■□□□ 1.21
PLXND1-204ENST00000504524 ZBTB38Q8NAP3 1195 aaPredicted RBP22.62■■□□□ 1.21
PLXND1-204ENST00000504524 PLA2G12BQ9BX93 195 aa22.62■■□□□ 1.21
PLXND1-204ENST00000504524 UBN2Q6ZU65 1347 aa22.62■■□□□ 1.21
PLXND1-204ENST00000504524 CDHR2Q9BYE9 1310 aa22.62■■□□□ 1.21
PLXND1-204ENST00000504524 USP42Q9H9J4 1324 aaKnown RBP22.61■■□□□ 1.21
PLXND1-204ENST00000504524 TSHZ3Q63HK5 1081 aa22.61■■□□□ 1.21
PLXND1-204ENST00000504524 NUTM1Q86Y26 1132 aa22.61■■□□□ 1.21
PLXND1-204ENST00000504524 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.61■■□□□ 1.21
PLXND1-204ENST00000504524 G3BP1Q13283 466 aaKnown RBP eCLIP22.6■■□□□ 1.21
PLXND1-204ENST00000504524 ZNF772Q68DY9 489 aaPredicted RBP22.6■■□□□ 1.21
PLXND1-204ENST00000504524 BCL11BQ9C0K0 894 aaPredicted RBP22.6■■□□□ 1.21
PLXND1-204ENST00000504524 COL24A1Q17RW2 1714 aa22.6■■□□□ 1.21
PLXND1-204ENST00000504524 UBR3Q6ZT12 1888 aa22.6■■□□□ 1.21
PLXND1-204ENST00000504524 CDC45O75419 566 aa22.6■■□□□ 1.21
PLXND1-204ENST00000504524 SDSP20132 328 aa22.6■■□□□ 1.21
PLXND1-204ENST00000504524 RC3H1Q5TC82 1133 aaKnown RBP22.6■■□□□ 1.21
PLXND1-204ENST00000504524 TBC1D9Q6ZT07 1266 aa22.6■■□□□ 1.21
PLXND1-204ENST00000504524 KRT27Q7Z3Y8 459 aa22.6■■□□□ 1.21
PLXND1-204ENST00000504524 FAM89AQ96GI7 184 aa22.59■■□□□ 1.21
PLXND1-204ENST00000504524 SIL1Q9H173 461 aa22.59■■□□□ 1.21
PLXND1-204ENST00000504524 CCNL1Q9UK58 526 aaPredicted RBP22.59■■□□□ 1.21
PLXND1-204ENST00000504524 RBM6P78332 1123 aaKnown RBP22.58■■□□□ 1.21
PLXND1-204ENST00000504524 FAM196AQ6ZSG2 479 aa22.57■■□□□ 1.2
PLXND1-204ENST00000504524 SYNE4Q8N205 404 aa22.57■■□□□ 1.2
PLXND1-204ENST00000504524 CLASRPQ8N2M8 674 aaKnown RBP22.57■■□□□ 1.2
PLXND1-204ENST00000504524 PI4K2BQ8TCG2 481 aa22.57■■□□□ 1.2
PLXND1-204ENST00000504524 LRP5O75197 1615 aa22.56■■□□□ 1.2
PLXND1-204ENST00000504524 TBC1D32Q96NH3 1257 aa22.56■■□□□ 1.2
PLXND1-204ENST00000504524 CSF1RP07333 972 aa22.55■■□□□ 1.2
PLXND1-204ENST00000504524 MFAP1P55081 439 aaKnown RBP22.55■■□□□ 1.2
PLXND1-204ENST00000504524 CHMP3Q9Y3E7 222 aa22.55■■□□□ 1.2
PLXND1-204ENST00000504524 TTC41PQ6P2S7 1318 aa22.54■■□□□ 1.2
PLXND1-204ENST00000504524 RPS6KA4O75676 772 aa22.54■■□□□ 1.2
PLXND1-204ENST00000504524 EAF2Q96CJ1 260 aaPredicted RBP22.54■■□□□ 1.2
PLXND1-204ENST00000504524 SPEF2Q9C093 1822 aa22.53■■□□□ 1.2
PLXND1-204ENST00000504524 RGL2O15211 777 aa22.53■■□□□ 1.2
PLXND1-204ENST00000504524 SUSD4Q5VX71 490 aa22.53■■□□□ 1.2
PLXND1-204ENST00000504524 AACSQ86V21 672 aa22.53■■□□□ 1.2
PLXND1-204ENST00000504524 IPO9Q96P70 1041 aaKnown RBP22.53■■□□□ 1.2
PLXND1-204ENST00000504524 UPF2Q9HAU5 1272 aaKnown RBP22.53■■□□□ 1.2
PLXND1-204ENST00000504524 TRMT112Q9UI30 125 aaKnown RBP22.53■■□□□ 1.2
PLXND1-204ENST00000504524 MSH5O43196 834 aa22.52■■□□□ 1.2
PLXND1-204ENST00000504524 PARP10Q53GL7 1025 aa22.52■■□□□ 1.2
PLXND1-204ENST00000504524 ATG9AQ7Z3C6 839 aa22.52■■□□□ 1.2
PLXND1-204ENST00000504524 TNS1Q9HBL0 1735 aaKnown RBP22.52■■□□□ 1.2
PLXND1-204ENST00000504524 IRS4O14654 1257 aaPredicted RBP22.51■■□□□ 1.19
PLXND1-204ENST00000504524 CTSWP56202 376 aa22.51■■□□□ 1.19
PLXND1-204ENST00000504524 TFCP2Q12800 502 aa22.51■■□□□ 1.19
PLXND1-204ENST00000504524 CLEC4GQ6UXB4 293 aa22.51■■□□□ 1.19
PLXND1-204ENST00000504524 SMIM5Q71RC9 77 aa22.51■■□□□ 1.19
PLXND1-204ENST00000504524 AMIGO3Q86WK7 504 aa22.51■■□□□ 1.19
PLXND1-204ENST00000504524 ZNF594Q96JF6 807 aaPredicted RBP22.51■■□□□ 1.19
PLXND1-204ENST00000504524 ZNF652Q9Y2D9 606 aa22.51■■□□□ 1.19
PLXND1-204ENST00000504524 GNPATO15228 680 aa22.5■■□□□ 1.19
PLXND1-204ENST00000504524 NTSR2O95665 410 aa22.5■■□□□ 1.19
PLXND1-204ENST00000504524 IFIT2P09913 472 aaKnown RBP22.5■■□□□ 1.19
PLXND1-204ENST00000504524 TTLL11Q8NHH1 800 aa22.5■■□□□ 1.19
PLXND1-204ENST00000504524 BCL2L12Q9HB09 334 aa22.5■■□□□ 1.19
PLXND1-204ENST00000504524 LRRC4BQ9NT99 713 aa22.5■■□□□ 1.19
PLXND1-204ENST00000504524 TLR7Q9NYK1 1049 aaKnown RBP22.5■■□□□ 1.19
PLXND1-204ENST00000504524 EYA2O00167 538 aa22.49■■□□□ 1.19
PLXND1-204ENST00000504524 CIAO1O76071 339 aa22.49■■□□□ 1.19
PLXND1-204ENST00000504524 ECHDC1Q9NTX5 307 aa22.49■■□□□ 1.19
PLXND1-204ENST00000504524 NIP7Q9Y221 180 aaKnown RBP eCLIP22.49■■□□□ 1.19
PLXND1-204ENST00000504524 SH3TC1Q8TE82 1336 aa22.49■■□□□ 1.19
PLXND1-204ENST00000504524 ZNF609O15014 1411 aa22.49■■□□□ 1.19
PLXND1-204ENST00000504524 PDE8AO60658 829 aa22.48■■□□□ 1.19
PLXND1-204ENST00000504524 TRIM37O94972 964 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 222.7 ms