RNA–Protein interactions for RNA: ENST00000502548.5

RACK1-202, Transcript of receptor for activated C kinase 1, humanhuman

TSL 1 (best)

Gene RACK1, Length 1,090 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-202ENST00000502548 PRPF40BQ6NWY9 871 aaKnown RBP16.66■□□□□ 0.26
RACK1-202ENST00000502548 HOXA10P31260 410 aaPredicted RBP16.65■□□□□ 0.26
RACK1-202ENST00000502548 KSR2Q6VAB6 950 aa16.65■□□□□ 0.26
RACK1-202ENST00000502548 E9PSI1 815 aa16.64■□□□□ 0.25
RACK1-202ENST00000502548 SOGA3Q5TF21 947 aa16.64■□□□□ 0.25
RACK1-202ENST00000502548 C9orf131Q5VYM1 1079 aa16.64■□□□□ 0.25
RACK1-202ENST00000502548 C7orf43Q8WVR3 580 aa16.64■□□□□ 0.25
RACK1-202ENST00000502548 RPGRQ92834 1020 aaKnown RBP16.64■□□□□ 0.25
RACK1-202ENST00000502548 METTL22Q9BUU2 404 aaPredicted RBP16.64■□□□□ 0.25
RACK1-202ENST00000502548 ZNF219Q9P2Y4 722 aaPredicted RBP16.64■□□□□ 0.25
RACK1-202ENST00000502548 GOLGB1Q14789 3259 aaKnown RBP16.64■□□□□ 0.25
RACK1-202ENST00000502548 SH3TC1Q8TE82 1336 aa16.64■□□□□ 0.25
RACK1-202ENST00000502548 ABCC12Q96J65 1359 aa16.64■□□□□ 0.25
RACK1-202ENST00000502548 KIAA1551Q9HCM1 1747 aa16.63■□□□□ 0.25
RACK1-202ENST00000502548 PI4KAP2A4QPH2 592 aa16.63■□□□□ 0.25
RACK1-202ENST00000502548 G2E3Q7L622 706 aa16.63■□□□□ 0.25
RACK1-202ENST00000502548 SYNE4Q8N205 404 aa16.63■□□□□ 0.25
RACK1-202ENST00000502548 PI4KAP1Q8N8J0 262 aa16.63■□□□□ 0.25
RACK1-202ENST00000502548 RBM17Q96I25 401 aaKnown RBP16.63■□□□□ 0.25
RACK1-202ENST00000502548 MAP3K2Q9Y2U5 619 aa16.63■□□□□ 0.25
RACK1-202ENST00000502548 BCORQ6W2J9 1755 aa16.62■□□□□ 0.25
RACK1-202ENST00000502548 N4BP2Q86UW6 1770 aaPredicted RBP16.62■□□□□ 0.25
RACK1-202ENST00000502548 HCLS1P14317 486 aaPredicted RBP16.62■□□□□ 0.25
RACK1-202ENST00000502548 LMNB1P20700 586 aa16.62■□□□□ 0.25
RACK1-202ENST00000502548 SLFN5Q08AF3 891 aa16.62■□□□□ 0.25
RACK1-202ENST00000502548 CCDC191Q8NCU4 936 aa16.62■□□□□ 0.25
RACK1-202ENST00000502548 CRAMP1Q96RY5 1269 aa16.62■□□□□ 0.25
RACK1-202ENST00000502548 MYD88Q99836 296 aa16.62■□□□□ 0.25
RACK1-202ENST00000502548 AFDNP55196 1824 aaKnown RBP16.61■□□□□ 0.25
RACK1-202ENST00000502548 NFKBIEO00221 500 aa16.61■□□□□ 0.25
RACK1-202ENST00000502548 C3orf67Q6ZVT6 689 aa16.61■□□□□ 0.25
RACK1-202ENST00000502548 FAM89AQ96GI7 184 aa16.61■□□□□ 0.25
RACK1-202ENST00000502548 RNF181Q9P0P0 153 aa16.61■□□□□ 0.25
RACK1-202ENST00000502548 RIC1Q4ADV7 1423 aa16.61■□□□□ 0.25
RACK1-202ENST00000502548 RASSF7Q02833 373 aa16.6■□□□□ 0.25
RACK1-202ENST00000502548 FLIIQ13045 1269 aa16.6■□□□□ 0.25
RACK1-202ENST00000502548 CC2D2BQ6DHV5 1058 aa16.6■□□□□ 0.25
RACK1-202ENST00000502548 RTKN2Q8IZC4 609 aa16.6■□□□□ 0.25
RACK1-202ENST00000502548 ZBTB38Q8NAP3 1195 aaPredicted RBP16.6■□□□□ 0.25
RACK1-202ENST00000502548 ZNF428Q96B54 188 aa16.6■□□□□ 0.25
RACK1-202ENST00000502548 HSP90B1P14625 803 aaKnown RBP16.59■□□□□ 0.25
RACK1-202ENST00000502548 NEXNQ0ZGT2 675 aa16.59■□□□□ 0.25
RACK1-202ENST00000502548 CCDC93Q567U6 631 aa16.59■□□□□ 0.25
RACK1-202ENST00000502548 TAOK3Q9H2K8 898 aa16.59■□□□□ 0.25
RACK1-202ENST00000502548 GPBP1L1Q9HC44 474 aaPredicted RBP16.59■□□□□ 0.25
RACK1-202ENST00000502548 CWC25Q9NXE8 425 aaPredicted RBP16.59■□□□□ 0.25
RACK1-202ENST00000502548 ADCY9O60503 1353 aa16.59■□□□□ 0.25
RACK1-202ENST00000502548 IRS4O14654 1257 aaPredicted RBP16.58■□□□□ 0.24
RACK1-202ENST00000502548 BBOX1O75936 387 aa16.58■□□□□ 0.24
RACK1-202ENST00000502548 PRELPP51888 382 aa16.58■□□□□ 0.24
RACK1-202ENST00000502548 FKBP5Q13451 457 aaPredicted RBP16.58■□□□□ 0.24
RACK1-202ENST00000502548 SF3B3Q15393 1217 aaKnown RBP16.58■□□□□ 0.24
RACK1-202ENST00000502548 GRIPAP1Q4V328 841 aa16.58■□□□□ 0.24
RACK1-202ENST00000502548 RTL5Q5HYW3 569 aaPredicted RBP16.58■□□□□ 0.24
RACK1-202ENST00000502548 CDCA7LQ96GN5 454 aa16.58■□□□□ 0.24
RACK1-202ENST00000502548 LTBP3Q9NS15 1303 aa16.58■□□□□ 0.24
RACK1-202ENST00000502548 PCCAP05165 728 aaPredicted RBP16.57■□□□□ 0.24
RACK1-202ENST00000502548 DDX46Q7L014 1031 aaKnown RBP16.57■□□□□ 0.24
RACK1-202ENST00000502548 TRMT2AQ8IZ69 625 aaKnown RBP16.57■□□□□ 0.24
RACK1-202ENST00000502548 IGKV5-2P06315 115 aa16.56■□□□□ 0.24
RACK1-202ENST00000502548 OLFM4Q6UX06 510 aa16.56■□□□□ 0.24
RACK1-202ENST00000502548 ZNF526Q8TF50 670 aaPredicted RBP16.56■□□□□ 0.24
RACK1-202ENST00000502548 DNAAF4Q8WXU2 420 aa16.56■□□□□ 0.24
RACK1-202ENST00000502548 TMX4Q9H1E5 349 aaPredicted RBP16.56■□□□□ 0.24
RACK1-202ENST00000502548 ZC3H4Q9UPT8 1303 aaKnown RBP16.55■□□□□ 0.24
RACK1-202ENST00000502548 FKBP4Q02790 459 aaKnown RBP eCLIP16.55■□□□□ 0.24
RACK1-202ENST00000502548 NEURL1BA8MQ27 555 aa16.54■□□□□ 0.24
RACK1-202ENST00000502548 PPEF1O14829 653 aaPredicted RBP16.54■□□□□ 0.24
RACK1-202ENST00000502548 CWF19L2Q2TBE0 894 aaKnown RBP16.54■□□□□ 0.24
RACK1-202ENST00000502548 LINS1Q8NG48 757 aa16.54■□□□□ 0.24
RACK1-202ENST00000502548 ATP6V0A2Q9Y487 856 aa16.54■□□□□ 0.24
RACK1-202ENST00000502548 NUP98P52948 1817 aa16.54■□□□□ 0.24
RACK1-202ENST00000502548 ABCC4O15439 1325 aa16.53■□□□□ 0.24
RACK1-202ENST00000502548 ANKRD31Q8N7Z5 1873 aa16.53■□□□□ 0.24
RACK1-202ENST00000502548 PDE8AO60658 829 aa16.53■□□□□ 0.24
RACK1-202ENST00000502548 GRAPQ13588 217 aa16.53■□□□□ 0.24
RACK1-202ENST00000502548 SP8Q8IXZ3 490 aa16.53■□□□□ 0.24
RACK1-202ENST00000502548 GRAPLQ8TC17 118 aaPredicted RBP16.53■□□□□ 0.24
RACK1-202ENST00000502548 JARID2Q92833 1246 aaPredicted RBP16.53■□□□□ 0.24
RACK1-202ENST00000502548 PSMD1Q99460 953 aa16.53■□□□□ 0.24
RACK1-202ENST00000502548 H7C1W4 665 aa16.52■□□□□ 0.24
RACK1-202ENST00000502548 GCKRQ14397 625 aa16.52■□□□□ 0.24
RACK1-202ENST00000502548 DPY19L2Q6NUT2 758 aa16.52■□□□□ 0.24
RACK1-202ENST00000502548 TMC4Q7Z404 712 aa16.52■□□□□ 0.24
RACK1-202ENST00000502548 BRCA1P38398 1863 aaKnown RBP16.52■□□□□ 0.23
RACK1-202ENST00000502548 KDM2BQ8NHM5 1336 aa16.51■□□□□ 0.23
RACK1-202ENST00000502548 CDHR2Q9BYE9 1310 aa16.51■□□□□ 0.23
RACK1-202ENST00000502548 CHD4Q14839 1912 aa16.51■□□□□ 0.23
RACK1-202ENST00000502548 GLTPD2A6NH11 291 aa16.51■□□□□ 0.23
RACK1-202ENST00000502548 F6X3S4 739 aa16.51■□□□□ 0.23
RACK1-202ENST00000502548 CT47B1P0C2W7 299 aaPredicted RBP16.51■□□□□ 0.23
RACK1-202ENST00000502548 MRPL50Q8N5N7 158 aaKnown RBP16.51■□□□□ 0.23
RACK1-202ENST00000502548 ZNF277Q9NRM2 450 aaPredicted RBP16.51■□□□□ 0.23
RACK1-202ENST00000502548 RPS8P62241 208 aaKnown RBP16.5■□□□□ 0.23
RACK1-202ENST00000502548 CCDC152Q4G0S7 254 aa16.5■□□□□ 0.23
RACK1-202ENST00000502548 BEND3Q5T5X7 828 aa16.5■□□□□ 0.23
RACK1-202ENST00000502548 SSH1Q8WYL5 1049 aa16.5■□□□□ 0.23
RACK1-202ENST00000502548 IARSP41252 1262 aaKnown RBP16.49■□□□□ 0.23
RACK1-202ENST00000502548 ALDH1L2Q3SY69 923 aa16.49■□□□□ 0.23
RACK1-202ENST00000502548 CELF1Q92879 486 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms