RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 TGFB2P61812 414 aa18.04■□□□□ 0.48
RNF4-202ENST00000502316 ST5P78524 1137 aa18.04■□□□□ 0.48
RNF4-202ENST00000502316 LINS1Q8NG48 757 aa18.04■□□□□ 0.48
RNF4-202ENST00000502316 ARHGAP45Q92619 1136 aa18.04■□□□□ 0.48
RNF4-202ENST00000502316 ABCC12Q96J65 1359 aa18.04■□□□□ 0.48
RNF4-202ENST00000502316 UTRNP46939 3433 aa18.03■□□□□ 0.48
RNF4-202ENST00000502316 NEURL1BA8MQ27 555 aa18.03■□□□□ 0.48
RNF4-202ENST00000502316 BEND3Q5T5X7 828 aa18.03■□□□□ 0.48
RNF4-202ENST00000502316 KLHL34Q8N239 644 aa18.03■□□□□ 0.48
RNF4-202ENST00000502316 NLGN2Q8NFZ4 835 aa18.03■□□□□ 0.48
RNF4-202ENST00000502316 CWC25Q9NXE8 425 aaPredicted RBP18.03■□□□□ 0.48
RNF4-202ENST00000502316 NOB1Q9ULX3 412 aaKnown RBP18.03■□□□□ 0.48
RNF4-202ENST00000502316 KLRG2A4D1S0 409 aaPredicted RBP18.02■□□□□ 0.48
RNF4-202ENST00000502316 NPHP1O15259 732 aa18.02■□□□□ 0.48
RNF4-202ENST00000502316 ERFEQ4G0M1 354 aa18.02■□□□□ 0.48
RNF4-202ENST00000502316 NUTM1Q86Y26 1132 aa18.02■□□□□ 0.48
RNF4-202ENST00000502316 CCDC24Q8N4L8 307 aa18.02■□□□□ 0.48
RNF4-202ENST00000502316 TRMT112Q9UI30 125 aaKnown RBP18.02■□□□□ 0.48
RNF4-202ENST00000502316 N4BP2Q86UW6 1770 aaPredicted RBP18.02■□□□□ 0.47
RNF4-202ENST00000502316 SH3TC1Q8TE82 1336 aa18.01■□□□□ 0.47
RNF4-202ENST00000502316 GTF2E1P29083 439 aaPredicted RBP18.01■□□□□ 0.47
RNF4-202ENST00000502316 CWF19L2Q2TBE0 894 aaKnown RBP18.01■□□□□ 0.47
RNF4-202ENST00000502316 SLC10A5Q5PT55 438 aa18.01■□□□□ 0.47
RNF4-202ENST00000502316 ZBTB38Q8NAP3 1195 aaPredicted RBP18.01■□□□□ 0.47
RNF4-202ENST00000502316 API5Q9BZZ5 524 aaKnown RBP18.01■□□□□ 0.47
RNF4-202ENST00000502316 PDZRN3Q9UPQ7 1066 aa18.01■□□□□ 0.47
RNF4-202ENST00000502316 TNRC6CQ9HCJ0 1690 aaKnown RBP18.01■□□□□ 0.47
RNF4-202ENST00000502316 DLEC1Q9Y238 1755 aa18.01■□□□□ 0.47
RNF4-202ENST00000502316 PDE6BP35913 854 aa18■□□□□ 0.47
RNF4-202ENST00000502316 GCKRQ14397 625 aa18■□□□□ 0.47
RNF4-202ENST00000502316 COL11A2P13942 1736 aaPredicted RBP18■□□□□ 0.47
RNF4-202ENST00000502316 LAMB2P55268 1798 aa17.99■□□□□ 0.47
RNF4-202ENST00000502316 BRCA1P38398 1863 aaKnown RBP17.99■□□□□ 0.47
RNF4-202ENST00000502316 IPO8O15397 1037 aaKnown RBP17.99■□□□□ 0.47
RNF4-202ENST00000502316 ALDH1L1O75891 902 aa17.99■□□□□ 0.47
RNF4-202ENST00000502316 PCCAP05165 728 aaPredicted RBP17.99■□□□□ 0.47
RNF4-202ENST00000502316 KCNA3P22001 575 aa17.99■□□□□ 0.47
RNF4-202ENST00000502316 SYNE4Q8N205 404 aa17.99■□□□□ 0.47
RNF4-202ENST00000502316 FAM89AQ96GI7 184 aa17.99■□□□□ 0.47
RNF4-202ENST00000502316 RCAN3Q9UKA8 241 aa17.99■□□□□ 0.47
RNF4-202ENST00000502316 DDX60Q8IY21 1712 aaKnown RBP17.98■□□□□ 0.47
RNF4-202ENST00000502316 DPEP1P16444 411 aa17.98■□□□□ 0.47
RNF4-202ENST00000502316 CRY2Q49AN0 593 aa17.98■□□□□ 0.47
RNF4-202ENST00000502316 SLC4A10Q6U841 1118 aa17.98■□□□□ 0.47
RNF4-202ENST00000502316 ATF7IPQ6VMQ6 1270 aa17.98■□□□□ 0.47
RNF4-202ENST00000502316 SRCIN1Q9C0H9 1055 aa17.98■□□□□ 0.47
RNF4-202ENST00000502316 ABCC4O15439 1325 aa17.98■□□□□ 0.47
RNF4-202ENST00000502316 CDHR2Q9BYE9 1310 aa17.98■□□□□ 0.47
RNF4-202ENST00000502316 A0A0G2JLW4 131 aa17.97■□□□□ 0.47
RNF4-202ENST00000502316 TRIM27P14373 513 aa17.97■□□□□ 0.47
RNF4-202ENST00000502316 CHRNA5P30532 468 aa17.97■□□□□ 0.47
RNF4-202ENST00000502316 H0YIN7 160 aa17.96■□□□□ 0.47
RNF4-202ENST00000502316 H7C1W4 665 aa17.96■□□□□ 0.47
RNF4-202ENST00000502316 SRGNP10124 158 aa17.96■□□□□ 0.47
RNF4-202ENST00000502316 CASP7P55210 303 aa17.96■□□□□ 0.47
RNF4-202ENST00000502316 ZKSCAN2Q63HK3 967 aa17.96■□□□□ 0.47
RNF4-202ENST00000502316 C2CD5Q86YS7 1000 aa17.96■□□□□ 0.47
RNF4-202ENST00000502316 FRAT1Q92837 279 aaPredicted RBP17.96■□□□□ 0.47
RNF4-202ENST00000502316 IRS4O14654 1257 aaPredicted RBP17.95■□□□□ 0.46
RNF4-202ENST00000502316 HCLS1P14317 486 aaPredicted RBP17.95■□□□□ 0.46
RNF4-202ENST00000502316 HSP90B1P14625 803 aaKnown RBP17.95■□□□□ 0.46
RNF4-202ENST00000502316 CCT4P50991 539 aaKnown RBP17.95■□□□□ 0.46
RNF4-202ENST00000502316 NLRP3Q96P20 1036 aa17.95■□□□□ 0.46
RNF4-202ENST00000502316 RTL5Q5HYW3 569 aaPredicted RBP17.94■□□□□ 0.46
RNF4-202ENST00000502316 INTS3Q68E01 1043 aaKnown RBP17.94■□□□□ 0.46
RNF4-202ENST00000502316 C3orf67Q6ZVT6 689 aa17.94■□□□□ 0.46
RNF4-202ENST00000502316 UBE3BQ7Z3V4 1068 aa17.94■□□□□ 0.46
RNF4-202ENST00000502316 UTYO14607 1347 aa17.94■□□□□ 0.46
RNF4-202ENST00000502316 GRM8O00222 908 aa17.93■□□□□ 0.46
RNF4-202ENST00000502316 NPR1P16066 1061 aa17.93■□□□□ 0.46
RNF4-202ENST00000502316 HOXA10P31260 410 aaPredicted RBP17.93■□□□□ 0.46
RNF4-202ENST00000502316 STYK1Q6J9G0 422 aa17.93■□□□□ 0.46
RNF4-202ENST00000502316 MASTLQ96GX5 879 aa17.93■□□□□ 0.46
RNF4-202ENST00000502316 PIM2Q9P1W9 311 aa17.93■□□□□ 0.46
RNF4-202ENST00000502316 TNNQ9UQP3 1299 aa17.93■□□□□ 0.46
RNF4-202ENST00000502316 SF3B3Q15393 1217 aaKnown RBP17.92■□□□□ 0.46
RNF4-202ENST00000502316 JARID2Q92833 1246 aaPredicted RBP17.92■□□□□ 0.46
RNF4-202ENST00000502316 PLA2G12BQ9BX93 195 aa17.92■□□□□ 0.46
RNF4-202ENST00000502316 PDE8AO60658 829 aa17.91■□□□□ 0.46
RNF4-202ENST00000502316 C9orf78Q9NZ63 289 aaPredicted RBP17.91■□□□□ 0.46
RNF4-202ENST00000502316 TTLL6Q8N841 843 aa17.9■□□□□ 0.46
RNF4-202ENST00000502316 CNKSR1Q969H4 720 aa17.9■□□□□ 0.46
RNF4-202ENST00000502316 CLUAP1Q96AJ1 413 aa17.9■□□□□ 0.46
RNF4-202ENST00000502316 USP44Q9H0E7 712 aa17.9■□□□□ 0.46
RNF4-202ENST00000502316 ARFGEF1Q9Y6D6 1849 aa17.9■□□□□ 0.46
RNF4-202ENST00000502316 MYH3P11055 1940 aa17.9■□□□□ 0.46
RNF4-202ENST00000502316 NBPF7P0C2Y1 421 aaPredicted RBP17.89■□□□□ 0.45
RNF4-202ENST00000502316 CTSWP56202 376 aa17.89■□□□□ 0.45
RNF4-202ENST00000502316 DALRD3Q5D0E6 543 aaKnown RBP17.89■□□□□ 0.45
RNF4-202ENST00000502316 DZIP1LQ8IYY4 767 aaKnown RBP17.89■□□□□ 0.45
RNF4-202ENST00000502316 RPGRQ92834 1020 aaKnown RBP17.89■□□□□ 0.45
RNF4-202ENST00000502316 ZNF622Q969S3 477 aaKnown RBP eCLIP17.89■□□□□ 0.45
RNF4-202ENST00000502316 CRAMP1Q96RY5 1269 aa17.89■□□□□ 0.45
RNF4-202ENST00000502316 RLBP1P12271 317 aa17.88■□□□□ 0.45
RNF4-202ENST00000502316 YBX3P16989 372 aaKnown RBP eCLIP17.88■□□□□ 0.45
RNF4-202ENST00000502316 ALDH1B1P30837 517 aa17.88■□□□□ 0.45
RNF4-202ENST00000502316 FTSJ3Q8IY81 847 aaKnown RBP17.88■□□□□ 0.45
RNF4-202ENST00000502316 TMEM57Q8N5G2 664 aa17.88■□□□□ 0.45
RNF4-202ENST00000502316 RTL9Q8NET4 1388 aa17.88■□□□□ 0.45
RNF4-202ENST00000502316 SLX4Q8IY92 1834 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms