RNA–Protein interactions for RNA: ENST00000498644.5

MTA1-216, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-216ENST00000498644 HOXA10P31260 410 aaPredicted RBP21.84■■□□□ 1.09
MTA1-216ENST00000498644 AIMP1Q12904 312 aaKnown RBP21.84■■□□□ 1.09
MTA1-216ENST00000498644 HDGFL1Q5TGJ6 251 aa21.84■■□□□ 1.09
MTA1-216ENST00000498644 MBIPQ9NS73 344 aa21.84■■□□□ 1.09
MTA1-216ENST00000498644 IFT57Q9NWB7 429 aa21.84■■□□□ 1.09
MTA1-216ENST00000498644 GNAI1P63096 354 aa21.83■■□□□ 1.09
MTA1-216ENST00000498644 FKBP4Q02790 459 aaKnown RBP eCLIP21.83■■□□□ 1.093e-6■■■□□ 15.1
MTA1-216ENST00000498644 FSTL1Q12841 308 aa21.83■■□□□ 1.09
MTA1-216ENST00000498644 SLC10A5Q5PT55 438 aa21.83■■□□□ 1.09
MTA1-216ENST00000498644 UTP14AQ9BVJ6 771 aaKnown RBP21.83■■□□□ 1.09
MTA1-216ENST00000498644 CHPF2Q9P2E5 772 aa21.83■■□□□ 1.09
MTA1-216ENST00000498644 DBF4Q9UBU7 674 aaPredicted RBP21.83■■□□□ 1.09
MTA1-216ENST00000498644 RNF123Q5XPI4 1314 aa21.82■■□□□ 1.08
MTA1-216ENST00000498644 APLP1P51693 650 aa21.82■■□□□ 1.08
MTA1-216ENST00000498644 DUSP27Q5VZP5 1158 aa21.82■■□□□ 1.08
MTA1-216ENST00000498644 RPGRQ92834 1020 aaKnown RBP21.82■■□□□ 1.08
MTA1-216ENST00000498644 ANKRD36CQ5JPF3 1778 aa21.82■■□□□ 1.08
MTA1-216ENST00000498644 TCIRG1Q13488 830 aa21.81■■□□□ 1.08
MTA1-216ENST00000498644 CCDC184Q52MB2 194 aa21.81■■□□□ 1.08
MTA1-216ENST00000498644 RBM17Q96I25 401 aaKnown RBP21.81■■□□□ 1.08
MTA1-216ENST00000498644 NLRP3Q96P20 1036 aa21.81■■□□□ 1.08
MTA1-216ENST00000498644 CRAMP1Q96RY5 1269 aa21.81■■□□□ 1.08
MTA1-216ENST00000498644 WDR90Q96KV7 1748 aa21.8■■□□□ 1.08
MTA1-216ENST00000498644 CC2D2BQ6DHV5 1058 aa21.8■■□□□ 1.08
MTA1-216ENST00000498644 HYPKQ9NX55 129 aa21.8■■□□□ 1.08
MTA1-216ENST00000498644 GRIPAP1Q4V328 841 aa21.79■■□□□ 1.08
MTA1-216ENST00000498644 OLFM4Q6UX06 510 aa21.79■■□□□ 1.08
MTA1-216ENST00000498644 NLRP10Q86W26 655 aa21.79■■□□□ 1.08
MTA1-216ENST00000498644 PLBD2Q8NHP8 589 aa21.79■■□□□ 1.08
MTA1-216ENST00000498644 POTECB2RU33 542 aa21.78■■□□□ 1.08
MTA1-216ENST00000498644 ANKRD13DQ6ZTN6 518 aa21.78■■□□□ 1.08
MTA1-216ENST00000498644 SMC1BQ8NDV3 1235 aa21.78■■□□□ 1.08
MTA1-216ENST00000498644 PSMD1Q99460 953 aa21.77■■□□□ 1.08
MTA1-216ENST00000498644 ZNF277Q9NRM2 450 aaPredicted RBP21.77■■□□□ 1.08
MTA1-216ENST00000498644 ANP32CO43423 234 aa21.76■■□□□ 1.07
MTA1-216ENST00000498644 C3orf67Q6ZVT6 689 aa21.76■■□□□ 1.07
MTA1-216ENST00000498644 SYNE4Q8N205 404 aa21.76■■□□□ 1.07
MTA1-216ENST00000498644 SNED1Q8TER0 1413 aa21.76■■□□□ 1.07
MTA1-216ENST00000498644 CHMP4AQ9BY43 222 aa21.76■■□□□ 1.07
MTA1-216ENST00000498644 TRMT112Q9UI30 125 aaKnown RBP21.76■■□□□ 1.07
MTA1-216ENST00000498644 DDNO94850 711 aaPredicted RBP21.75■■□□□ 1.07
MTA1-216ENST00000498644 CCDC27Q2M243 656 aa21.75■■□□□ 1.07
MTA1-216ENST00000498644 IARSP41252 1262 aaKnown RBP21.74■■□□□ 1.07
MTA1-216ENST00000498644 SH3TC1Q8TE82 1336 aa21.74■■□□□ 1.07
MTA1-216ENST00000498644 ELL2O00472 640 aaPredicted RBP21.73■■□□□ 1.07
MTA1-216ENST00000498644 PPEF1O14829 653 aaPredicted RBP21.73■■□□□ 1.07
MTA1-216ENST00000498644 NCBP3Q53F19 620 aaKnown RBP21.73■■□□□ 1.07
MTA1-216ENST00000498644 ISCA1Q9BUE6 129 aa21.73■■□□□ 1.07
MTA1-216ENST00000498644 MRS2Q9HD23 443 aa21.73■■□□□ 1.07
MTA1-216ENST00000498644 HCLS1P14317 486 aaPredicted RBP21.72■■□□□ 1.07
MTA1-216ENST00000498644 C8orf58Q8NAV2 365 aa21.72■■□□□ 1.07
MTA1-216ENST00000498644 LAMB2P55268 1798 aa21.71■■□□□ 1.07
MTA1-216ENST00000498644 FZD9O00144 591 aa21.71■■□□□ 1.07
MTA1-216ENST00000498644 BBOX1O75936 387 aa21.71■■□□□ 1.07
MTA1-216ENST00000498644 TRIM28Q13263 835 aaKnown RBP21.71■■□□□ 1.07
MTA1-216ENST00000498644 WWC1Q8IX03 1113 aa21.71■■□□□ 1.07
MTA1-216ENST00000498644 DNAJC5GQ8N7S2 189 aa21.71■■□□□ 1.07
MTA1-216ENST00000498644 L3MBTL3Q96JM7 780 aaPredicted RBP21.71■■□□□ 1.07
MTA1-216ENST00000498644 TMX4Q9H1E5 349 aaPredicted RBP21.71■■□□□ 1.07
MTA1-216ENST00000498644 ATP6V0A2Q9Y487 856 aa21.71■■□□□ 1.07
MTA1-216ENST00000498644 IQCA1LA6NCM1 817 aa21.7■■□□□ 1.06
MTA1-216ENST00000498644 JDP2Q8WYK2 163 aa21.7■■□□□ 1.06
MTA1-216ENST00000498644 ATP5J2-PTCD1G3V325 749 aa21.69■■□□□ 1.06
MTA1-216ENST00000498644 GOLGA2Q08379 1002 aa21.69■■□□□ 1.06
MTA1-216ENST00000498644 CCDC30Q5VVM6 783 aa21.69■■□□□ 1.06
MTA1-216ENST00000498644 RIC3Q7Z5B4 369 aa21.69■■□□□ 1.06
MTA1-216ENST00000498644 PHAXQ9H814 394 aaKnown RBP21.69■■□□□ 1.06
MTA1-216ENST00000498644 ABCC4O15439 1325 aa21.69■■□□□ 1.06
MTA1-216ENST00000498644 SCN4AP35499 1836 aa21.69■■□□□ 1.06
MTA1-216ENST00000498644 TCERG1O14776 1098 aaKnown RBP21.68■■□□□ 1.06
MTA1-216ENST00000498644 DDX46Q7L014 1031 aaKnown RBP21.68■■□□□ 1.06
MTA1-216ENST00000498644 VPS33BQ9H267 617 aa21.68■■□□□ 1.06
MTA1-216ENST00000498644 IL16Q14005 1332 aa21.67■■□□□ 1.06
MTA1-216ENST00000498644 ZNF541Q9H0D2 1346 aa21.67■■□□□ 1.06
MTA1-216ENST00000498644 SP8Q8IXZ3 490 aa21.67■■□□□ 1.06
MTA1-216ENST00000498644 FAM89AQ96GI7 184 aa21.67■■□□□ 1.06
MTA1-216ENST00000498644 TSPYL6Q8N831 410 aa21.66■■□□□ 1.06
MTA1-216ENST00000498644 TSR2Q969E8 191 aaKnown RBP21.66■■□□□ 1.06
MTA1-216ENST00000498644 DDX60Q8IY21 1712 aaKnown RBP21.66■■□□□ 1.06
MTA1-216ENST00000498644 GRAPQ13588 217 aa21.65■■□□□ 1.06
MTA1-216ENST00000498644 TMC4Q7Z404 712 aa21.65■■□□□ 1.06
MTA1-216ENST00000498644 GPC2Q8N158 579 aa21.65■■□□□ 1.06
MTA1-216ENST00000498644 LARGE2Q8N3Y3 721 aa21.65■■□□□ 1.06
MTA1-216ENST00000498644 GRAPLQ8TC17 118 aaPredicted RBP21.65■■□□□ 1.06
MTA1-216ENST00000498644 DDX58O95786 925 aaKnown RBP21.64■■□□□ 1.05
MTA1-216ENST00000498644 EIF6P56537 245 aaKnown RBP21.64■■□□□ 1.05
MTA1-216ENST00000498644 SF3B3Q15393 1217 aaKnown RBP21.64■■□□□ 1.05
MTA1-216ENST00000498644 CHADLQ6NUI6 762 aa21.64■■□□□ 1.05
MTA1-216ENST00000498644 SLC51AQ86UW1 340 aa21.64■■□□□ 1.05
MTA1-216ENST00000498644 SUPT20HQ8NEM7 779 aa21.64■■□□□ 1.05
MTA1-216ENST00000498644 ZNF428Q96B54 188 aa21.64■■□□□ 1.05
MTA1-216ENST00000498644 RTFDC1Q9BY42 306 aaPredicted RBP21.64■■□□□ 1.05
MTA1-216ENST00000498644 TAF1DQ9H5J8 278 aaPredicted RBP21.64■■□□□ 1.05
MTA1-216ENST00000498644 ZBTB38Q8NAP3 1195 aaPredicted RBP21.63■■□□□ 1.05
MTA1-216ENST00000498644 HACL1Q9UJ83 578 aa21.63■■□□□ 1.05
MTA1-216ENST00000498644 COL4A5P29400 1685 aa21.63■■□□□ 1.05
MTA1-216ENST00000498644 IRS4O14654 1257 aaPredicted RBP21.62■■□□□ 1.05
MTA1-216ENST00000498644 HSP90B1P14625 803 aaKnown RBP21.62■■□□□ 1.05
MTA1-216ENST00000498644 HTRA3P83110 453 aa21.62■■□□□ 1.05
MTA1-216ENST00000498644 DPP8Q6V1X1 898 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms