RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, human

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL4A-211	ENST00000498562	RPGR	Q92834	1020 aa	Known RBP	33.95	■■■■□ 3.03
CUL4A-211	ENST00000498562	IARS	P41252	1262 aa	Known RBP	33.94	■■■■□ 3.02
CUL4A-211	ENST00000498562	CHADL	Q6NUI6	762 aa		33.94	■■■■□ 3.02
CUL4A-211	ENST00000498562	PCNT	O95613	3336 aa		33.94	■■■■□ 3.02
CUL4A-211	ENST00000498562	IQCA1L	A6NCM1	817 aa		33.93	■■■■□ 3.02
CUL4A-211	ENST00000498562	NEUROD2	Q15784	382 aa		33.93	■■■■□ 3.02
CUL4A-211	ENST00000498562	PARP10	Q53GL7	1025 aa		33.93	■■■■□ 3.02
CUL4A-211	ENST00000498562	PSMD1	Q99460	953 aa		33.93	■■■■□ 3.02
CUL4A-211	ENST00000498562	PPP1R42	Q7Z4L9	355 aa		33.92	■■■■□ 3.02
CUL4A-211	ENST00000498562	C3orf67	Q6ZVT6	689 aa		33.91	■■■■□ 3.02
CUL4A-211	ENST00000498562	RUNDC1	Q96C34	613 aa		33.91	■■■■□ 3.02
CUL4A-211	ENST00000498562	COL4A5	P29400	1685 aa		33.9	■■■■□ 3.02
CUL4A-211	ENST00000498562	CC2D2B	Q6DHV5	1058 aa		33.9	■■■■□ 3.02
CUL4A-211	ENST00000498562	TAF1D	Q9H5J8	278 aa	Predicted RBP	33.9	■■■■□ 3.02
CUL4A-211	ENST00000498562	TRIM35	Q9UPQ4	493 aa		33.9	■■■■□ 3.02
CUL4A-211	ENST00000498562	FZD9	O00144	591 aa		33.89	■■■■□ 3.02
CUL4A-211	ENST00000498562	CHL1	O00533	1208 aa		33.89	■■■■□ 3.02
CUL4A-211	ENST00000498562	WDR43	Q15061	677 aa	Known RBP eCLIP	33.89	■■■■□ 3.02
CUL4A-211	ENST00000498562	NECTIN2	Q92692	538 aa		33.89	■■■■□ 3.02
CUL4A-211	ENST00000498562	RBM17	Q96I25	401 aa	Known RBP	33.89	■■■■□ 3.02
CUL4A-211	ENST00000498562	CRAMP1	Q96RY5	1269 aa		33.89	■■■■□ 3.02
CUL4A-211	ENST00000498562	LAMB2	P55268	1798 aa		33.88	■■■■□ 3.01
CUL4A-211	ENST00000498562	ADAMTSL1	Q8N6G6	1762 aa		33.88	■■■■□ 3.01
CUL4A-211	ENST00000498562	KRT24	Q2M2I5	525 aa		33.88	■■■■□ 3.01
CUL4A-211	ENST00000498562	SLC51A	Q86UW1	340 aa		33.88	■■■■□ 3.01
CUL4A-211	ENST00000498562	COPS6	Q7L5N1	327 aa		33.86	■■■■□ 3.01
CUL4A-211	ENST00000498562	LDHD	Q86WU2	507 aa		33.86	■■■■□ 3.01
CUL4A-211	ENST00000498562	UTP14A	Q9BVJ6	771 aa	Known RBP	33.86	■■■■□ 3.01
CUL4A-211	ENST00000498562	PPEF1	O14829	653 aa	Predicted RBP	33.85	■■■■□ 3.01
CUL4A-211	ENST00000498562	XAGE3	Q8WTP9	111 aa		33.85	■■■■□ 3.01
CUL4A-211	ENST00000498562	ADAMTS8	Q9UP79	889 aa		33.85	■■■■□ 3.01
CUL4A-211	ENST00000498562	RNF123	Q5XPI4	1314 aa		33.84	■■■■□ 3.01
CUL4A-211	ENST00000498562	AIMP1	Q12904	312 aa	Known RBP	33.84	■■■■□ 3.01
CUL4A-211	ENST00000498562	SLC10A5	Q5PT55	438 aa		33.84	■■■■□ 3.01
CUL4A-211	ENST00000498562	NLRP3	Q96P20	1036 aa		33.84	■■■■□ 3.01
CUL4A-211	ENST00000498562	DDX21	Q9NR30	783 aa	Known RBP eCLIP	33.84	■■■■□ 3.01
CUL4A-211	ENST00000498562	HACL1	Q9UJ83	578 aa		33.84	■■■■□ 3.01
CUL4A-211	ENST00000498562	GRIPAP1	Q4V328	841 aa		33.83	■■■■□ 3.01
CUL4A-211	ENST00000498562	HSP90AB3P	Q58FF7	597 aa		33.83	■■■■□ 3.01
CUL4A-211	ENST00000498562	JDP2	Q8WYK2	163 aa		33.83	■■■■□ 3.01
CUL4A-211	ENST00000498562	LAS1L	Q9Y4W2	734 aa	Known RBP	33.83	■■■■□ 3.01
CUL4A-211	ENST00000498562	GPC2	Q8N158	579 aa		33.82	■■■■□ 3
CUL4A-211	ENST00000498562	CREBZF	Q9NS37	354 aa		33.82	■■■■□ 3
CUL4A-211	ENST00000498562	PASK	Q96RG2	1323 aa		33.81	■■■■□ 3
CUL4A-211	ENST00000498562	NLRP10	Q86W26	655 aa		33.81	■■■■□ 3
CUL4A-211	ENST00000498562	PRKRIP1	Q9H875	184 aa	Predicted RBP	33.81	■■■■□ 3
CUL4A-211	ENST00000498562	TCERG1	O14776	1098 aa	Known RBP	33.8	■■■■□ 3
CUL4A-211	ENST00000498562	EPHX2	P34913	555 aa		33.8	■■■■□ 3
CUL4A-211	ENST00000498562	CHPF2	Q9P2E5	772 aa		33.8	■■■■□ 3
CUL4A-211	ENST00000498562	EAPP	Q56P03	285 aa	Predicted RBP	33.79	■■■■□ 3
CUL4A-211	ENST00000498562	LTBP1	Q14766	1721 aa		33.79	■■■■□ 3
CUL4A-211	ENST00000498562	ABCC4	O15439	1325 aa		33.79	■■■■□ 3
CUL4A-211	ENST00000498562	TCIRG1	Q13488	830 aa		33.78	■■■■□ 3
CUL4A-211	ENST00000498562	HOXB7	P09629	217 aa		33.77	■■■■□ 3
CUL4A-211	ENST00000498562	EIF6	P56537	245 aa	Known RBP	33.76	■■■□□ 2.99
CUL4A-211	ENST00000498562	HDGFL1	Q5TGJ6	251 aa		33.76	■■■□□ 2.99
CUL4A-211	ENST00000498562	LARGE2	Q8N3Y3	721 aa		33.76	■■■□□ 2.99
CUL4A-211	ENST00000498562	ATP6V0A2	Q9Y487	856 aa		33.76	■■■□□ 2.99
CUL4A-211	ENST00000498562	CFAP44	Q96MT7	982 aa		33.75	■■■□□ 2.99
CUL4A-211	ENST00000498562	DDX60	Q8IY21	1712 aa	Known RBP	33.75	■■■□□ 2.99
CUL4A-211	ENST00000498562	ITGBL1	O95965	494 aa	Predicted RBP	33.74	■■■□□ 2.99
CUL4A-211	ENST00000498562	HCLS1	P14317	486 aa	Predicted RBP	33.74	■■■□□ 2.99
CUL4A-211	ENST00000498562	PNMA8A	Q86V59	439 aa	Predicted RBP	33.74	■■■□□ 2.99
CUL4A-211	ENST00000498562	HSPA1A	P0DMV8	641 aa	Known RBP	33.73	■■■□□ 2.99
CUL4A-211	ENST00000498562	HSPA1B	P0DMV9	641 aa	Known RBP	33.73	■■■□□ 2.99
CUL4A-211	ENST00000498562	COL13A1	Q5TAT6	717 aa	Predicted RBP	33.73	■■■□□ 2.99
CUL4A-211	ENST00000498562	TRMT112	Q9UI30	125 aa	Known RBP	33.73	■■■□□ 2.99
CUL4A-211	ENST00000498562	GJA3	Q9Y6H8	435 aa		33.73	■■■□□ 2.99
CUL4A-211	ENST00000498562	MKRN1	Q9UHC7	482 aa	Known RBP	33.72	■■■□□ 2.99
CUL4A-211	ENST00000498562	CLEC11A	Q9Y240	323 aa		33.72	■■■□□ 2.99
CUL4A-211	ENST00000498562	SH3TC1	Q8TE82	1336 aa		33.72	■■■□□ 2.99
CUL4A-211	ENST00000498562	PLBD2	Q8NHP8	589 aa		33.71	■■■□□ 2.99
CUL4A-211	ENST00000498562	DBF4	Q9UBU7	674 aa	Predicted RBP	33.71	■■■□□ 2.99
CUL4A-211	ENST00000498562	TAF1	P21675	1872 aa		33.71	■■■□□ 2.99
CUL4A-211	ENST00000498562	PPIP5K2	O43314	1243 aa		33.7	■■■□□ 2.99
CUL4A-211	ENST00000498562	NIM1K	Q8IY84	436 aa		33.7	■■■□□ 2.99
CUL4A-211	ENST00000498562	TMX4	Q9H1E5	349 aa	Predicted RBP	33.7	■■■□□ 2.99
CUL4A-211	ENST00000498562	MBIP	Q9NS73	344 aa		33.7	■■■□□ 2.99
CUL4A-211	ENST00000498562	CNTNAP1	P78357	1384 aa		33.7	■■■□□ 2.98
CUL4A-211	ENST00000498562	SCNN1D	P51172	638 aa		33.69	■■■□□ 2.98
CUL4A-211	ENST00000498562	AOC3	Q16853	763 aa		33.69	■■■□□ 2.98
CUL4A-211	ENST00000498562	RTFDC1	Q9BY42	306 aa	Predicted RBP	33.69	■■■□□ 2.98
CUL4A-211	ENST00000498562	LRRC37A	A6NMS7	1700 aa		33.68	■■■□□ 2.98
CUL4A-211	ENST00000498562	BBOX1	O75936	387 aa		33.68	■■■□□ 2.98
CUL4A-211	ENST00000498562	DUSP27	Q5VZP5	1158 aa		33.68	■■■□□ 2.98
CUL4A-211	ENST00000498562	VPS33B	Q9H267	617 aa		33.68	■■■□□ 2.98
CUL4A-211	ENST00000498562	ZNF853	P0CG23	659 aa		33.67	■■■□□ 2.98
CUL4A-211	ENST00000498562	MAP1S	Q66K74	1059 aa	Predicted RBP	33.67	■■■□□ 2.98
CUL4A-211	ENST00000498562	ANKRD13D	Q6ZTN6	518 aa		33.67	■■■□□ 2.98
CUL4A-211	ENST00000498562	SP8	Q8IXZ3	490 aa		33.67	■■■□□ 2.98
CUL4A-211	ENST00000498562	ISCA1	Q9BUE6	129 aa		33.67	■■■□□ 2.98
CUL4A-211	ENST00000498562	TMEM88B	A6NKF7	163 aa		33.66	■■■□□ 2.98
CUL4A-211	ENST00000498562	LMOD1	P29536	600 aa	Predicted RBP	33.66	■■■□□ 2.98
CUL4A-211	ENST00000498562	GRAP	Q13588	217 aa		33.66	■■■□□ 2.98
CUL4A-211	ENST00000498562	DDX46	Q7L014	1031 aa	Known RBP	33.66	■■■□□ 2.98
CUL4A-211	ENST00000498562	CNTROB	Q8N137	903 aa		33.66	■■■□□ 2.98
CUL4A-211	ENST00000498562	GRAPL	Q8TC17	118 aa	Predicted RBP	33.66	■■■□□ 2.98
CUL4A-211	ENST00000498562	ZNF428	Q96B54	188 aa		33.66	■■■□□ 2.98
CUL4A-211	ENST00000498562	APAF1	O14727	1248 aa		33.65	■■■□□ 2.98
CUL4A-211	ENST00000498562	SUPT20H	Q8NEM7	779 aa		33.65	■■■□□ 2.98

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