RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 ITSN1Q15811 1721 aa8.32□□□□□ -1.08
TMEM39A-212ENST00000497993 ADGRF5Q8IZF2 1346 aa8.31□□□□□ -1.08
TMEM39A-212ENST00000497993 CARNS1A5YM72 827 aa8.31□□□□□ -1.08
TMEM39A-212ENST00000497993 ALDH1A1P00352 501 aa8.31□□□□□ -1.08
TMEM39A-212ENST00000497993 NBPF20Q3BBV1 942 aa8.31□□□□□ -1.08
TMEM39A-212ENST00000497993 ZNF326Q5BKZ1 582 aaKnown RBP8.31□□□□□ -1.08
TMEM39A-212ENST00000497993 VASH1Q7L8A9 365 aaPredicted RBP8.31□□□□□ -1.08
TMEM39A-212ENST00000497993 SIRT1Q96EB6 747 aa8.31□□□□□ -1.08
TMEM39A-212ENST00000497993 TRPM1Q7Z4N2 1603 aa8.31□□□□□ -1.08
TMEM39A-212ENST00000497993 DHX57Q6P158 1386 aaKnown RBP8.31□□□□□ -1.08
TMEM39A-212ENST00000497993 ROBO2Q9HCK4 1378 aa8.31□□□□□ -1.08
TMEM39A-212ENST00000497993 TOPAZ1Q8N9V7 1692 aa8.3□□□□□ -1.08
TMEM39A-212ENST00000497993 YTHDC2Q9H6S0 1430 aaKnown RBP8.3□□□□□ -1.08
TMEM39A-212ENST00000497993 USP32Q8NFA0 1604 aa8.3□□□□□ -1.08
TMEM39A-212ENST00000497993 TMEM88BA6NKF7 163 aa8.3□□□□□ -1.08
TMEM39A-212ENST00000497993 ADH1CP00326 375 aa8.3□□□□□ -1.08
TMEM39A-212ENST00000497993 NR5A1Q13285 461 aa8.3□□□□□ -1.08
TMEM39A-212ENST00000497993 ARID5BQ14865 1188 aa8.3□□□□□ -1.08
TMEM39A-212ENST00000497993 ADAMTS19Q8TE59 1207 aa8.3□□□□□ -1.08
TMEM39A-212ENST00000497993 PCDHB9Q9Y5E1 797 aa8.3□□□□□ -1.08
TMEM39A-212ENST00000497993 TLL2Q9Y6L7 1015 aa8.3□□□□□ -1.08
TMEM39A-212ENST00000497993 WASF2Q9Y6W5 498 aa8.3□□□□□ -1.08
TMEM39A-212ENST00000497993 PALM3A6NDB9 673 aaPredicted RBP8.29□□□□□ -1.08
TMEM39A-212ENST00000497993 PPM1GO15355 546 aaPredicted RBP8.29□□□□□ -1.08
TMEM39A-212ENST00000497993 LMOD1P29536 600 aaPredicted RBP8.29□□□□□ -1.08
TMEM39A-212ENST00000497993 HSPA1LP34931 641 aa8.29□□□□□ -1.08
TMEM39A-212ENST00000497993 KCTD15Q96SI1 283 aaPredicted RBP8.29□□□□□ -1.08
TMEM39A-212ENST00000497993 C14orf93Q9H972 538 aaKnown RBP8.29□□□□□ -1.08
TMEM39A-212ENST00000497993 C1orf167Q5SNV9 1468 aa8.28□□□□□ -1.08
TMEM39A-212ENST00000497993 J3QL48 77 aa8.28□□□□□ -1.08
TMEM39A-212ENST00000497993 DGAT1O75907 488 aa8.28□□□□□ -1.08
TMEM39A-212ENST00000497993 SMPD1P17405 629 aa8.28□□□□□ -1.08
TMEM39A-212ENST00000497993 GRM5P41594 1212 aa8.28□□□□□ -1.08
TMEM39A-212ENST00000497993 SEMA3FQ13275 785 aa8.28□□□□□ -1.08
TMEM39A-212ENST00000497993 DRC1Q96MC2 740 aa8.28□□□□□ -1.08
TMEM39A-212ENST00000497993 KIAA1522Q9P206 1035 aaPredicted RBP8.28□□□□□ -1.08
TMEM39A-212ENST00000497993 ABCA3Q99758 1704 aa8.28□□□□□ -1.08
TMEM39A-212ENST00000497993 TRPM3Q9HCF6 1732 aaPredicted RBP8.27□□□□□ -1.09
TMEM39A-212ENST00000497993 CRYBG1Q9Y4K1 1723 aa8.27□□□□□ -1.09
TMEM39A-212ENST00000497993 TCF3P15923 654 aa8.27□□□□□ -1.09
TMEM39A-212ENST00000497993 SEPT12Q8IYM1 358 aa8.27□□□□□ -1.09
TMEM39A-212ENST00000497993 SLAIN2Q9P270 581 aa8.27□□□□□ -1.09
TMEM39A-212ENST00000497993 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.26□□□□□ -1.09
TMEM39A-212ENST00000497993 ESPNB1AK53 854 aa8.26□□□□□ -1.09
TMEM39A-212ENST00000497993 RNF20Q5VTR2 975 aa8.26□□□□□ -1.09
TMEM39A-212ENST00000497993 C8orf37Q96NL8 207 aa8.26□□□□□ -1.09
TMEM39A-212ENST00000497993 ALG2Q9H553 416 aa8.26□□□□□ -1.09
TMEM39A-212ENST00000497993 CEP126Q9P2H0 1117 aa8.26□□□□□ -1.09
TMEM39A-212ENST00000497993 ALS2Q96Q42 1657 aa8.26□□□□□ -1.09
TMEM39A-212ENST00000497993 ANKARQ7Z5J8 1434 aa8.26□□□□□ -1.09
TMEM39A-212ENST00000497993 PXDNQ92626 1479 aa8.26□□□□□ -1.09
TMEM39A-212ENST00000497993 JCADQ9P266 1359 aa8.25□□□□□ -1.09
TMEM39A-212ENST00000497993 QRICH2Q9H0J4 1663 aa8.25□□□□□ -1.09
TMEM39A-212ENST00000497993 FAM187AA6NFU0 413 aa8.25□□□□□ -1.09
TMEM39A-212ENST00000497993 DHX9Q08211 1270 aaKnown RBP8.25□□□□□ -1.09
TMEM39A-212ENST00000497993 NNTQ13423 1086 aa8.25□□□□□ -1.09
TMEM39A-212ENST00000497993 PKDCCQ504Y2 493 aa8.25□□□□□ -1.09
TMEM39A-212ENST00000497993 SREK1Q8WXA9 508 aaKnown RBP8.25□□□□□ -1.09
TMEM39A-212ENST00000497993 TULP4Q9NRJ4 1543 aa8.24□□□□□ -1.09
TMEM39A-212ENST00000497993 AVPP01185 164 aa8.24□□□□□ -1.09
TMEM39A-212ENST00000497993 FSHRP23945 695 aa8.24□□□□□ -1.09
TMEM39A-212ENST00000497993 PIP4K2BP78356 416 aa8.24□□□□□ -1.09
TMEM39A-212ENST00000497993 BRINP3Q76B58 766 aa8.24□□□□□ -1.09
TMEM39A-212ENST00000497993 TFIP11Q9UBB9 837 aaKnown RBP8.24□□□□□ -1.09
TMEM39A-212ENST00000497993 LRP6O75581 1613 aa8.23□□□□□ -1.09
TMEM39A-212ENST00000497993 GIGYF1O75420 1035 aaPredicted RBP8.23□□□□□ -1.09
TMEM39A-212ENST00000497993 ZNF16P17020 682 aaPredicted RBP8.23□□□□□ -1.09
TMEM39A-212ENST00000497993 ATF3P18847 181 aa8.23□□□□□ -1.09
TMEM39A-212ENST00000497993 RGL3Q3MIN7 710 aa8.23□□□□□ -1.09
TMEM39A-212ENST00000497993 INTS6LQ5JSJ4 861 aaKnown RBP8.23□□□□□ -1.09
TMEM39A-212ENST00000497993 CCDC116Q8IYX3 515 aa8.23□□□□□ -1.09
TMEM39A-212ENST00000497993 BCL2L13Q9BXK5 485 aa8.23□□□□□ -1.09
TMEM39A-212ENST00000497993 SOS2Q07890 1332 aaPredicted RBP8.23□□□□□ -1.09
TMEM39A-212ENST00000497993 SPATA31A6Q5VVP1 1343 aa8.23□□□□□ -1.09
TMEM39A-212ENST00000497993 GPRASP1Q5JY77 1395 aa8.22□□□□□ -1.09
TMEM39A-212ENST00000497993 PLEKHH1Q9ULM0 1364 aa8.22□□□□□ -1.09
TMEM39A-212ENST00000497993 NCLP19338 710 aaKnown RBP8.22□□□□□ -1.09
TMEM39A-212ENST00000497993 CTC1Q2NKJ3 1217 aa8.22□□□□□ -1.09
TMEM39A-212ENST00000497993 DNAJC14Q6Y2X3 702 aaPredicted RBP8.22□□□□□ -1.09
TMEM39A-212ENST00000497993 HPS1Q92902 700 aa8.22□□□□□ -1.09
TMEM39A-212ENST00000497993 EMILIN1Q9Y6C2 1016 aa8.22□□□□□ -1.09
TMEM39A-212ENST00000497993 NWD2Q9ULI1 1742 aa8.22□□□□□ -1.09
TMEM39A-212ENST00000497993 EIF3AQ14152 1382 aaKnown RBP8.22□□□□□ -1.09
TMEM39A-212ENST00000497993 ATP7BP35670 1465 aa8.21□□□□□ -1.09
TMEM39A-212ENST00000497993 AKAP12Q02952 1782 aa8.21□□□□□ -1.1
TMEM39A-212ENST00000497993 NR3C2P08235 984 aa8.21□□□□□ -1.1
TMEM39A-212ENST00000497993 SMCPP49901 116 aaPredicted RBP8.21□□□□□ -1.1
TMEM39A-212ENST00000497993 SLFNL1Q499Z3 407 aa8.21□□□□□ -1.1
TMEM39A-212ENST00000497993 PHTF2Q8N3S3 785 aa8.21□□□□□ -1.1
TMEM39A-212ENST00000497993 SPATA32Q96LK8 384 aa8.21□□□□□ -1.1
TMEM39A-212ENST00000497993 PGPEP1Q9NXJ5 209 aa8.21□□□□□ -1.1
TMEM39A-212ENST00000497993 USP54Q70EL1 1684 aa8.21□□□□□ -1.1
TMEM39A-212ENST00000497993 CDCA8Q53HL2 280 aa8.2□□□□□ -1.1
TMEM39A-212ENST00000497993 PPP1R26Q5T8A7 1209 aaPredicted RBP8.2□□□□□ -1.1
TMEM39A-212ENST00000497993 CRIPAKQ8N1N5 446 aa8.2□□□□□ -1.1
TMEM39A-212ENST00000497993 KLF16Q9BXK1 252 aaPredicted RBP8.2□□□□□ -1.1
TMEM39A-212ENST00000497993 PNPLA6Q8IY17 1366 aa8.2□□□□□ -1.1
TMEM39A-212ENST00000497993 DISP3Q9P2K9 1392 aa8.2□□□□□ -1.1
TMEM39A-212ENST00000497993 SBNO2Q9Y2G9 1366 aa8.2□□□□□ -1.1
TMEM39A-212ENST00000497993 RALGAPBQ86X10 1494 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms