RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 SYCP1Q15431 976 aa12.41□□□□□ -0.42
TRAPPC12-223ENST00000497597 CREBRFQ8IUR6 639 aa12.41□□□□□ -0.42
TRAPPC12-223ENST00000497597 DHX37Q8IY37 1157 aaKnown RBP12.41□□□□□ -0.42
TRAPPC12-223ENST00000497597 ATP10AO60312 1499 aa12.41□□□□□ -0.42
TRAPPC12-223ENST00000497597 SERPINC1P01008 464 aa12.41□□□□□ -0.42
TRAPPC12-223ENST00000497597 ANXA1P04083 346 aa12.41□□□□□ -0.42
TRAPPC12-223ENST00000497597 PLA2G4AP47712 749 aa12.41□□□□□ -0.42
TRAPPC12-223ENST00000497597 STX1AQ16623 288 aa12.41□□□□□ -0.42
TRAPPC12-223ENST00000497597 ZSCAN31Q96LW9 406 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC12-223ENST00000497597 HYPKQ9NX55 129 aa12.41□□□□□ -0.42
TRAPPC12-223ENST00000497597 SHPRHQ149N8 1683 aa12.41□□□□□ -0.42
TRAPPC12-223ENST00000497597 NCKAP5LQ9HCH0 1330 aa12.41□□□□□ -0.42
TRAPPC12-223ENST00000497597 NOM1Q5C9Z4 860 aaKnown RBP12.4□□□□□ -0.42
TRAPPC12-223ENST00000497597 ASXL2Q76L83 1435 aa12.4□□□□□ -0.42
TRAPPC12-223ENST00000497597 PLA2G4DQ86XP0 818 aa12.4□□□□□ -0.42
TRAPPC12-223ENST00000497597 TDRD7Q8NHU6 1098 aaKnown RBP12.4□□□□□ -0.42
TRAPPC12-223ENST00000497597 CFAP100Q494V2 611 aa12.4□□□□□ -0.42
TRAPPC12-223ENST00000497597 RNF20Q5VTR2 975 aa12.4□□□□□ -0.42
TRAPPC12-223ENST00000497597 FSD1Q9BTV5 496 aa12.4□□□□□ -0.42
TRAPPC12-223ENST00000497597 UTP14AQ9BVJ6 771 aaKnown RBP12.4□□□□□ -0.42
TRAPPC12-223ENST00000497597 RBM8AQ9Y5S9 174 aaKnown RBP12.4□□□□□ -0.42
TRAPPC12-223ENST00000497597 CFAP65Q6ZU64 1925 aaKnown RBP12.4□□□□□ -0.42
TRAPPC12-223ENST00000497597 ARHGAP31Q2M1Z3 1444 aa12.4□□□□□ -0.42
TRAPPC12-223ENST00000497597 CCT2P78371 535 aaKnown RBP12.4□□□□□ -0.42
TRAPPC12-223ENST00000497597 RHPN1Q8TCX5 695 aa12.4□□□□□ -0.42
TRAPPC12-223ENST00000497597 PTCH1Q13635 1447 aa12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 FLIIQ13045 1269 aa12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 COL9A3Q14050 684 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 DEF6Q9H4E7 631 aa12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 ARFGAP3Q9NP61 516 aa12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 SH2B1Q9NRF2 756 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 TULP2O00295 520 aa12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 NEMFO60524 1076 aa12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 MYCNP04198 464 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 KARSQ15046 597 aaKnown RBP12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 CYB5RLQ6IPT4 315 aa12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 PPP1R13BQ96KQ4 1090 aa12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 XPO4Q9C0E2 1151 aaKnown RBP12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 CCDC8Q9H0W5 538 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 BOLA2Q9H3K6 86 aa12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 ANO10Q9NW15 660 aa12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 PUF60Q9UHX1 559 aaKnown RBP12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 RRP15Q9Y3B9 282 aaKnown RBP12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 FHOD1Q9Y613 1164 aa12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 CLASRPQ8N2M8 674 aaKnown RBP12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 PGBD1Q96JS3 809 aa12.39□□□□□ -0.43
TRAPPC12-223ENST00000497597 SAMD9LQ8IVG5 1584 aa12.38□□□□□ -0.43
TRAPPC12-223ENST00000497597 CEP152O94986 1710 aa12.38□□□□□ -0.43
TRAPPC12-223ENST00000497597 A0A1B0GVL5 298 aa12.38□□□□□ -0.43
TRAPPC12-223ENST00000497597 CASQ1P31415 396 aa12.38□□□□□ -0.43
TRAPPC12-223ENST00000497597 FAM193AP78312 1265 aa12.38□□□□□ -0.43
TRAPPC12-223ENST00000497597 RAB11FIP4Q86YS3 637 aa12.38□□□□□ -0.43
TRAPPC12-223ENST00000497597 NFATC2IPQ8NCF5 419 aa12.38□□□□□ -0.43
TRAPPC12-223ENST00000497597 FAM227BQ96M60 508 aa12.38□□□□□ -0.43
TRAPPC12-223ENST00000497597 NAT10Q9H0A0 1025 aaKnown RBP12.38□□□□□ -0.43
TRAPPC12-223ENST00000497597 MADDQ8WXG6 1647 aa12.38□□□□□ -0.43
TRAPPC12-223ENST00000497597 RNF17Q9BXT8 1623 aaKnown RBP12.38□□□□□ -0.43
TRAPPC12-223ENST00000497597 KIF2AO00139 706 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC12-223ENST00000497597 DHX16O60231 1041 aaKnown RBP12.38□□□□□ -0.43
TRAPPC12-223ENST00000497597 TTC31Q49AM3 519 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC12-223ENST00000497597 NSD2O96028 1365 aa12.38□□□□□ -0.43
TRAPPC12-223ENST00000497597 BRPF1P55201 1214 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC12-223ENST00000497597 ATP8B2P98198 1209 aa12.37□□□□□ -0.43
TRAPPC12-223ENST00000497597 HSP90B2PQ58FF3 399 aa12.37□□□□□ -0.43
TRAPPC12-223ENST00000497597 PA2G4Q9UQ80 394 aaKnown RBP12.37□□□□□ -0.43
TRAPPC12-223ENST00000497597 TTC37Q6PGP7 1564 aa12.37□□□□□ -0.43
TRAPPC12-223ENST00000497597 C14orf37Q86TY3 774 aa12.37□□□□□ -0.43
TRAPPC12-223ENST00000497597 LSG1Q9H089 658 aaKnown RBP12.37□□□□□ -0.43
TRAPPC12-223ENST00000497597 MAST1Q9Y2H9 1570 aa12.37□□□□□ -0.43
TRAPPC12-223ENST00000497597 ATP10DQ9P241 1426 aa12.37□□□□□ -0.43
TRAPPC12-223ENST00000497597 AACSQ86V21 672 aa12.37□□□□□ -0.43
TRAPPC12-223ENST00000497597 OSBPL3Q9H4L5 887 aa12.37□□□□□ -0.43
TRAPPC12-223ENST00000497597 PREX2Q70Z35 1606 aa12.36□□□□□ -0.43
TRAPPC12-223ENST00000497597 CCZ1BP86790 482 aa12.36□□□□□ -0.43
TRAPPC12-223ENST00000497597 CCZ1P86791 482 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC12-223ENST00000497597 TTC14Q96N46 770 aa12.36□□□□□ -0.43
TRAPPC12-223ENST00000497597 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.36□□□□□ -0.43
TRAPPC12-223ENST00000497597 PTPRCP08575 1304 aa12.36□□□□□ -0.43
TRAPPC12-223ENST00000497597 MED14O60244 1454 aa12.36□□□□□ -0.43
TRAPPC12-223ENST00000497597 POLR3DP05423 398 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC12-223ENST00000497597 GSDMDP57764 484 aa12.36□□□□□ -0.43
TRAPPC12-223ENST00000497597 CREB3L3Q68CJ9 461 aa12.36□□□□□ -0.43
TRAPPC12-223ENST00000497597 WWC2Q6AWC2 1192 aa12.36□□□□□ -0.43
TRAPPC12-223ENST00000497597 GPATCH3Q96I76 525 aa12.36□□□□□ -0.43
TRAPPC12-223ENST00000497597 ERBB3P21860 1342 aa12.36□□□□□ -0.43
TRAPPC12-223ENST00000497597 ZNF853P0CG23 659 aa12.36□□□□□ -0.43
TRAPPC12-223ENST00000497597 PSMA5P28066 241 aa12.36□□□□□ -0.43
TRAPPC12-223ENST00000497597 STK38Q15208 465 aa12.36□□□□□ -0.43
TRAPPC12-223ENST00000497597 KIF1BPQ96EK5 621 aa12.36□□□□□ -0.43
TRAPPC12-223ENST00000497597 CDC42BPBQ9Y5S2 1711 aa12.35□□□□□ -0.43
TRAPPC12-223ENST00000497597 E4F1Q66K89 784 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC12-223ENST00000497597 MICALL1Q8N3F8 863 aa12.35□□□□□ -0.43
TRAPPC12-223ENST00000497597 C9orf78Q9NZ63 289 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC12-223ENST00000497597 CFAP45Q9UL16 551 aa12.35□□□□□ -0.43
TRAPPC12-223ENST00000497597 RIMS2Q9UQ26 1411 aa12.35□□□□□ -0.43
TRAPPC12-223ENST00000497597 DUOX2Q9NRD8 1548 aa12.35□□□□□ -0.43
TRAPPC12-223ENST00000497597 RHOXF2BP0C7M4 288 aa12.35□□□□□ -0.43
TRAPPC12-223ENST00000497597 IL13P35225 146 aa12.35□□□□□ -0.43
TRAPPC12-223ENST00000497597 VPS53Q5VIR6 699 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms