RNA–Protein interactions for RNA: ENST00000496821.5

ABCB1-209, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5

Gene ABCB1, Length 913 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-209ENST00000496821 SYNE4Q8N205 404 aa21.2■□□□□ 0.98
ABCB1-209ENST00000496821 CREBZFQ9NS37 354 aa21.2■□□□□ 0.98
ABCB1-209ENST00000496821 BABAM1Q9NWV8 329 aa21.2■□□□□ 0.98
ABCB1-209ENST00000496821 ADAMTSL1Q8N6G6 1762 aa21.2■□□□□ 0.98
ABCB1-209ENST00000496821 PROSER3Q2NL68 480 aa21.19■□□□□ 0.98
ABCB1-209ENST00000496821 C3orf67Q6ZVT6 689 aa21.19■□□□□ 0.98
ABCB1-209ENST00000496821 SLC51AQ86UW1 340 aa21.19■□□□□ 0.98
ABCB1-209ENST00000496821 PASKQ96RG2 1323 aa21.19■□□□□ 0.98
ABCB1-209ENST00000496821 CC2D2BQ6DHV5 1058 aa21.18■□□□□ 0.98
ABCB1-209ENST00000496821 RPGRQ92834 1020 aaKnown RBP21.18■□□□□ 0.98
ABCB1-209ENST00000496821 CRAMP1Q96RY5 1269 aa21.17■□□□□ 0.98
ABCB1-209ENST00000496821 ANXA1P04083 346 aa21.16■□□□□ 0.98
ABCB1-209ENST00000496821 LMOD3Q0VAK6 560 aa21.16■□□□□ 0.98
ABCB1-209ENST00000496821 PARP10Q53GL7 1025 aa21.16■□□□□ 0.98
ABCB1-209ENST00000496821 HACL1Q9UJ83 578 aa21.16■□□□□ 0.98
ABCB1-209ENST00000496821 RNF123Q5XPI4 1314 aa21.15■□□□□ 0.98
ABCB1-209ENST00000496821 ITGBL1O95965 494 aaPredicted RBP21.15■□□□□ 0.98
ABCB1-209ENST00000496821 HSPA1AP0DMV8 641 aaKnown RBP21.15■□□□□ 0.98
ABCB1-209ENST00000496821 HSPA1BP0DMV9 641 aaKnown RBP21.15■□□□□ 0.98
ABCB1-209ENST00000496821 EIF2S2P20042 333 aaKnown RBP21.15■□□□□ 0.98
ABCB1-209ENST00000496821 GPC2Q8N158 579 aa21.15■□□□□ 0.98
ABCB1-209ENST00000496821 MYBBP1AQ9BQG0 1328 aaKnown RBP21.14■□□□□ 0.97
ABCB1-209ENST00000496821 EPHX2P34913 555 aa21.14■□□□□ 0.97
ABCB1-209ENST00000496821 GRIPAP1Q4V328 841 aa21.14■□□□□ 0.97
ABCB1-209ENST00000496821 SLC10A5Q5PT55 438 aa21.14■□□□□ 0.97
ABCB1-209ENST00000496821 PPP1R42Q7Z4L9 355 aa21.14■□□□□ 0.97
ABCB1-209ENST00000496821 RBM17Q96I25 401 aaKnown RBP21.14■□□□□ 0.97
ABCB1-209ENST00000496821 PPEF1O14829 653 aaPredicted RBP21.13■□□□□ 0.97
ABCB1-209ENST00000496821 JDP2Q8WYK2 163 aa21.13■□□□□ 0.97
ABCB1-209ENST00000496821 CNTNAP1P78357 1384 aa21.12■□□□□ 0.97
ABCB1-209ENST00000496821 CHL1O00533 1208 aa21.12■□□□□ 0.97
ABCB1-209ENST00000496821 EAPPQ56P03 285 aaPredicted RBP21.12■□□□□ 0.97
ABCB1-209ENST00000496821 CCDC146Q8IYE0 955 aa21.12■□□□□ 0.97
ABCB1-209ENST00000496821 UTP14AQ9BVJ6 771 aaKnown RBP21.12■□□□□ 0.97
ABCB1-209ENST00000496821 MKRN1Q9UHC7 482 aaKnown RBP21.12■□□□□ 0.97
ABCB1-209ENST00000496821 LTBP1Q14766 1721 aa21.12■□□□□ 0.97
ABCB1-209ENST00000496821 ANKRD36CQ5JPF3 1778 aa21.11■□□□□ 0.97
ABCB1-209ENST00000496821 DDX10Q13206 875 aaKnown RBP21.11■□□□□ 0.97
ABCB1-209ENST00000496821 KRT24Q2M2I5 525 aa21.11■□□□□ 0.97
ABCB1-209ENST00000496821 NLRP3Q96P20 1036 aa21.11■□□□□ 0.97
ABCB1-209ENST00000496821 TRIM35Q9UPQ4 493 aa21.11■□□□□ 0.97
ABCB1-209ENST00000496821 COPS6Q7L5N1 327 aa21.1■□□□□ 0.97
ABCB1-209ENST00000496821 PNMA8AQ86V59 439 aaPredicted RBP21.1■□□□□ 0.97
ABCB1-209ENST00000496821 XAGE3Q8WTP9 111 aa21.1■□□□□ 0.97
ABCB1-209ENST00000496821 NLRP10Q86W26 655 aa21.09■□□□□ 0.97
ABCB1-209ENST00000496821 NECTIN2Q92692 538 aa21.09■□□□□ 0.97
ABCB1-209ENST00000496821 DDX21Q9NR30 783 aaKnown RBP eCLIP21.09■□□□□ 0.97
ABCB1-209ENST00000496821 ATP6V0A2Q9Y487 856 aa21.09■□□□□ 0.97
ABCB1-209ENST00000496821 ABCC4O15439 1325 aa21.08■□□□□ 0.97
ABCB1-209ENST00000496821 LAMB2P55268 1798 aa21.08■□□□□ 0.97
ABCB1-209ENST00000496821 TMEM88BA6NKF7 163 aa21.08■□□□□ 0.97
ABCB1-209ENST00000496821 SCNN1DP51172 638 aa21.08■□□□□ 0.97
ABCB1-209ENST00000496821 EIF6P56537 245 aaKnown RBP21.08■□□□□ 0.97
ABCB1-209ENST00000496821 NEUROD2Q15784 382 aa21.08■□□□□ 0.97
ABCB1-209ENST00000496821 LARGE2Q8N3Y3 721 aa21.08■□□□□ 0.97
ABCB1-209ENST00000496821 RUNDC1Q96C34 613 aa21.08■□□□□ 0.97
ABCB1-209ENST00000496821 TCERG1O14776 1098 aaKnown RBP21.07■□□□□ 0.96
ABCB1-209ENST00000496821 AIMP1Q12904 312 aaKnown RBP21.07■□□□□ 0.96
ABCB1-209ENST00000496821 TCIRG1Q13488 830 aa21.07■□□□□ 0.96
ABCB1-209ENST00000496821 HSP90AB3PQ58FF7 597 aa21.07■□□□□ 0.96
ABCB1-209ENST00000496821 MAP1SQ66K74 1059 aaPredicted RBP21.07■□□□□ 0.96
ABCB1-209ENST00000496821 CNTROBQ8N137 903 aa21.07■□□□□ 0.96
ABCB1-209ENST00000496821 TNS4Q8IZW8 715 aa21.06■□□□□ 0.96
ABCB1-209ENST00000496821 RTFDC1Q9BY42 306 aaPredicted RBP21.06■□□□□ 0.96
ABCB1-209ENST00000496821 CLEC11AQ9Y240 323 aa21.06■□□□□ 0.96
ABCB1-209ENST00000496821 GJA3Q9Y6H8 435 aa21.06■□□□□ 0.96
ABCB1-209ENST00000496821 HCLS1P14317 486 aaPredicted RBP21.05■□□□□ 0.96
ABCB1-209ENST00000496821 VPS33BQ9H267 617 aa21.05■□□□□ 0.96
ABCB1-209ENST00000496821 CHPF2Q9P2E5 772 aa21.05■□□□□ 0.96
ABCB1-209ENST00000496821 ADAMTS8Q9UP79 889 aa21.05■□□□□ 0.96
ABCB1-209ENST00000496821 PPIP5K2O43314 1243 aa21.04■□□□□ 0.96
ABCB1-209ENST00000496821 HOXB7P09629 217 aa21.04■□□□□ 0.96
ABCB1-209ENST00000496821 EPS15P42566 896 aa21.04■□□□□ 0.96
ABCB1-209ENST00000496821 VEGFBP49765 207 aa21.04■□□□□ 0.96
ABCB1-209ENST00000496821 AOC3Q16853 763 aa21.04■□□□□ 0.96
ABCB1-209ENST00000496821 NIM1KQ8IY84 436 aa21.04■□□□□ 0.96
ABCB1-209ENST00000496821 SH3TC1Q8TE82 1336 aa21.04■□□□□ 0.96
ABCB1-209ENST00000496821 BBOX1O75936 387 aa21.03■□□□□ 0.96
ABCB1-209ENST00000496821 WDR43Q15061 677 aaKnown RBP eCLIP21.03■□□□□ 0.96
ABCB1-209ENST00000496821 TRMT112Q9UI30 125 aaKnown RBP21.03■□□□□ 0.96
ABCB1-209ENST00000496821 RASSF10A6NK89 507 aa21.02■□□□□ 0.96
ABCB1-209ENST00000496821 LMOD1P29536 600 aaPredicted RBP21.02■□□□□ 0.96
ABCB1-209ENST00000496821 HDGFL1Q5TGJ6 251 aa21.02■□□□□ 0.96
ABCB1-209ENST00000496821 SP8Q8IXZ3 490 aa21.02■□□□□ 0.96
ABCB1-209ENST00000496821 LAS1LQ9Y4W2 734 aaKnown RBP21.02■□□□□ 0.96
ABCB1-209ENST00000496821 PLBD2Q8NHP8 589 aa21.01■□□□□ 0.95
ABCB1-209ENST00000496821 CFAP44Q96MT7 982 aa21.01■□□□□ 0.95
ABCB1-209ENST00000496821 DUOX1Q9NRD9 1551 aa21.01■□□□□ 0.95
ABCB1-209ENST00000496821 LRRC37AA6NMS7 1700 aa21.01■□□□□ 0.95
ABCB1-209ENST00000496821 DDX60Q8IY21 1712 aaKnown RBP21.01■□□□□ 0.95
ABCB1-209ENST00000496821 FOXN1O15353 648 aa21■□□□□ 0.95
ABCB1-209ENST00000496821 CXCL9Q07325 125 aa21■□□□□ 0.95
ABCB1-209ENST00000496821 GRAPQ13588 217 aa21■□□□□ 0.95
ABCB1-209ENST00000496821 USP50Q70EL3 339 aaPredicted RBP21■□□□□ 0.95
ABCB1-209ENST00000496821 SUPT20HQ8NEM7 779 aa21■□□□□ 0.95
ABCB1-209ENST00000496821 GRAPLQ8TC17 118 aaPredicted RBP21■□□□□ 0.95
ABCB1-209ENST00000496821 ISCA1Q9BUE6 129 aa21■□□□□ 0.95
ABCB1-209ENST00000496821 TMX4Q9H1E5 349 aaPredicted RBP21■□□□□ 0.95
ABCB1-209ENST00000496821 DBF4Q9UBU7 674 aaPredicted RBP21■□□□□ 0.95
ABCB1-209ENST00000496821 ZNRF3Q9ULT6 936 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms