RNA–Protein interactions for RNA: ENST00000496269.1

PCOLCE-210, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 995 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-210ENST00000496269 NPR1P16066 1061 aa28.53■■■□□ 2.16
PCOLCE-210ENST00000496269 TWISTNBQ3B726 338 aaPredicted RBP28.53■■■□□ 2.16
PCOLCE-210ENST00000496269 CCDC30Q5VVM6 783 aa28.53■■■□□ 2.16
PCOLCE-210ENST00000496269 PRPF40BQ6NWY9 871 aaKnown RBP28.53■■■□□ 2.16
PCOLCE-210ENST00000496269 CNKSR1Q969H4 720 aa28.53■■■□□ 2.16
PCOLCE-210ENST00000496269 ISCA1Q9BUE6 129 aa28.53■■■□□ 2.16
PCOLCE-210ENST00000496269 TIAM2Q8IVF5 1701 aa28.52■■■□□ 2.16
PCOLCE-210ENST00000496269 RNF123Q5XPI4 1314 aa28.52■■■□□ 2.16
PCOLCE-210ENST00000496269 RASSF7Q02833 373 aa28.52■■■□□ 2.16
PCOLCE-210ENST00000496269 C3orf67Q6ZVT6 689 aa28.52■■■□□ 2.16
PCOLCE-210ENST00000496269 PPP1R42Q7Z4L9 355 aa28.52■■■□□ 2.16
PCOLCE-210ENST00000496269 C7orf43Q8WVR3 580 aa28.52■■■□□ 2.16
PCOLCE-210ENST00000496269 DICER1Q9UPY3 1922 aaKnown RBP28.51■■■□□ 2.16
PCOLCE-210ENST00000496269 SLC10A5Q5PT55 438 aa28.51■■■□□ 2.15
PCOLCE-210ENST00000496269 UTP14AQ9BVJ6 771 aaKnown RBP28.51■■■□□ 2.15
PCOLCE-210ENST00000496269 SNED1Q8TER0 1413 aa28.51■■■□□ 2.15
PCOLCE-210ENST00000496269 GTF2E1P29083 439 aaPredicted RBP28.5■■■□□ 2.15
PCOLCE-210ENST00000496269 C21orf2O43822 256 aa28.49■■■□□ 2.15
PCOLCE-210ENST00000496269 C9orf131Q5VYM1 1079 aa28.49■■■□□ 2.15
PCOLCE-210ENST00000496269 SYNE4Q8N205 404 aa28.48■■■□□ 2.15
PCOLCE-210ENST00000496269 VAMP4O75379 141 aa28.47■■■□□ 2.15
PCOLCE-210ENST00000496269 HOXA10P31260 410 aaPredicted RBP28.47■■■□□ 2.15
PCOLCE-210ENST00000496269 EXOSC9Q06265 439 aaKnown RBP28.47■■■□□ 2.15
PCOLCE-210ENST00000496269 TRIM28Q13263 835 aaKnown RBP28.47■■■□□ 2.15
PCOLCE-210ENST00000496269 CHMP4AQ9BY43 222 aa28.47■■■□□ 2.15
PCOLCE-210ENST00000496269 LTBP3Q9NS15 1303 aa28.45■■■□□ 2.15
PCOLCE-210ENST00000496269 TCERG1O14776 1098 aaKnown RBP28.45■■■□□ 2.14
PCOLCE-210ENST00000496269 GOLGA2Q08379 1002 aa28.45■■■□□ 2.14
PCOLCE-210ENST00000496269 ZNF219Q9P2Y4 722 aaPredicted RBP28.45■■■□□ 2.14
PCOLCE-210ENST00000496269 ATP5J2-PTCD1G3V325 749 aa28.44■■■□□ 2.14
PCOLCE-210ENST00000496269 G2E3Q7L622 706 aa28.44■■■□□ 2.14
PCOLCE-210ENST00000496269 RNF181Q9P0P0 153 aa28.44■■■□□ 2.14
PCOLCE-210ENST00000496269 SH3TC1Q8TE82 1336 aa28.43■■■□□ 2.14
PCOLCE-210ENST00000496269 TAF1P21675 1872 aa28.42■■■□□ 2.14
PCOLCE-210ENST00000496269 RIC3Q7Z5B4 369 aa28.42■■■□□ 2.14
PCOLCE-210ENST00000496269 MYH16Q9H6N6 1097 aa28.42■■■□□ 2.14
PCOLCE-210ENST00000496269 TRMT112Q9UI30 125 aaKnown RBP28.42■■■□□ 2.14
PCOLCE-210ENST00000496269 LMNB1P20700 586 aa28.41■■■□□ 2.14
PCOLCE-210ENST00000496269 ALDH1B1P30837 517 aa28.41■■■□□ 2.14
PCOLCE-210ENST00000496269 OLFM4Q6UX06 510 aa28.41■■■□□ 2.14
PCOLCE-210ENST00000496269 ZNF428Q96B54 188 aa28.41■■■□□ 2.14
PCOLCE-210ENST00000496269 COL4A1P02462 1669 aa28.41■■■□□ 2.14
PCOLCE-210ENST00000496269 HCLS1P14317 486 aaPredicted RBP28.4■■■□□ 2.14
PCOLCE-210ENST00000496269 DIEXFQ68CQ4 756 aaKnown RBP28.4■■■□□ 2.14
PCOLCE-210ENST00000496269 SLC51AQ86UW1 340 aa28.4■■■□□ 2.14
PCOLCE-210ENST00000496269 CRAMP1Q96RY5 1269 aa28.4■■■□□ 2.14
PCOLCE-210ENST00000496269 METTL22Q9BUU2 404 aaPredicted RBP28.4■■■□□ 2.14
PCOLCE-210ENST00000496269 STK31Q9BXU1 1019 aa28.4■■■□□ 2.14
PCOLCE-210ENST00000496269 SLC4A2P04920 1241 aa28.39■■■□□ 2.14
PCOLCE-210ENST00000496269 SOGA3Q5TF21 947 aa28.39■■■□□ 2.14
PCOLCE-210ENST00000496269 NLRP3Q96P20 1036 aa28.39■■■□□ 2.14
PCOLCE-210ENST00000496269 KSR2Q6VAB6 950 aa28.38■■■□□ 2.13
PCOLCE-210ENST00000496269 ZNF526Q8TF50 670 aaPredicted RBP28.38■■■□□ 2.13
PCOLCE-210ENST00000496269 RPGRQ92834 1020 aaKnown RBP28.38■■■□□ 2.13
PCOLCE-210ENST00000496269 MYD88Q99836 296 aa28.38■■■□□ 2.13
PCOLCE-210ENST00000496269 ZC3H4Q9UPT8 1303 aaKnown RBP28.38■■■□□ 2.13
PCOLCE-210ENST00000496269 LRRC37AA6NMS7 1700 aa28.38■■■□□ 2.13
PCOLCE-210ENST00000496269 PI4KAP2A4QPH2 592 aa28.37■■■□□ 2.13
PCOLCE-210ENST00000496269 CCDC93Q567U6 631 aa28.37■■■□□ 2.13
PCOLCE-210ENST00000496269 MIER1Q8N108 512 aa28.37■■■□□ 2.13
PCOLCE-210ENST00000496269 PI4KAP1Q8N8J0 262 aa28.37■■■□□ 2.13
PCOLCE-210ENST00000496269 FAM89AQ96GI7 184 aa28.37■■■□□ 2.13
PCOLCE-210ENST00000496269 GPBP1L1Q9HC44 474 aaPredicted RBP28.37■■■□□ 2.13
PCOLCE-210ENST00000496269 MAP3K2Q9Y2U5 619 aa28.37■■■□□ 2.13
PCOLCE-210ENST00000496269 DDX58O95786 925 aaKnown RBP28.36■■■□□ 2.13
PCOLCE-210ENST00000496269 RBM17Q96I25 401 aaKnown RBP28.36■■■□□ 2.13
PCOLCE-210ENST00000496269 TAOK3Q9H2K8 898 aa28.36■■■□□ 2.13
PCOLCE-210ENST00000496269 ABCC4O15439 1325 aa28.36■■■□□ 2.13
PCOLCE-210ENST00000496269 IGKV5-2P06315 115 aa28.35■■■□□ 2.13
PCOLCE-210ENST00000496269 FLIIQ13045 1269 aa28.35■■■□□ 2.13
PCOLCE-210ENST00000496269 CCDC191Q8NCU4 936 aa28.35■■■□□ 2.13
PCOLCE-210ENST00000496269 KIF3CO14782 793 aa28.33■■■□□ 2.13
PCOLCE-210ENST00000496269 SLFN5Q08AF3 891 aa28.33■■■□□ 2.13
PCOLCE-210ENST00000496269 ZBTB38Q8NAP3 1195 aaPredicted RBP28.33■■■□□ 2.13
PCOLCE-210ENST00000496269 FKBP4Q02790 459 aaKnown RBP eCLIP28.32■■■□□ 2.12
PCOLCE-210ENST00000496269 E9PSI1 815 aa28.31■■■□□ 2.12
PCOLCE-210ENST00000496269 PCCAP05165 728 aaPredicted RBP28.31■■■□□ 2.12
PCOLCE-210ENST00000496269 SF3B3Q15393 1217 aaKnown RBP28.31■■■□□ 2.12
PCOLCE-210ENST00000496269 COL4A5P29400 1685 aa28.31■■■□□ 2.12
PCOLCE-210ENST00000496269 MYH3P11055 1940 aa28.31■■■□□ 2.12
PCOLCE-210ENST00000496269 PPEF1O14829 653 aaPredicted RBP28.3■■■□□ 2.12
PCOLCE-210ENST00000496269 TRMT2AQ8IZ69 625 aaKnown RBP28.3■■■□□ 2.12
PCOLCE-210ENST00000496269 RTKN2Q8IZC4 609 aa28.3■■■□□ 2.12
PCOLCE-210ENST00000496269 CWC25Q9NXE8 425 aaPredicted RBP28.3■■■□□ 2.12
PCOLCE-210ENST00000496269 WDR90Q96KV7 1748 aa28.29■■■□□ 2.12
PCOLCE-210ENST00000496269 IRS4O14654 1257 aaPredicted RBP28.29■■■□□ 2.12
PCOLCE-210ENST00000496269 RTL5Q5HYW3 569 aaPredicted RBP28.29■■■□□ 2.12
PCOLCE-210ENST00000496269 CC2D2BQ6DHV5 1058 aa28.29■■■□□ 2.12
PCOLCE-210ENST00000496269 CDCA7LQ96GN5 454 aa28.29■■■□□ 2.12
PCOLCE-210ENST00000496269 NMRK2Q9NPI5 230 aa28.29■■■□□ 2.12
PCOLCE-210ENST00000496269 PSMD1Q99460 953 aa28.28■■■□□ 2.12
PCOLCE-210ENST00000496269 LTBP1Q14766 1721 aa28.28■■■□□ 2.12
PCOLCE-210ENST00000496269 DUOX1Q9NRD9 1551 aa28.28■■■□□ 2.12
PCOLCE-210ENST00000496269 NEURL1BA8MQ27 555 aa28.27■■■□□ 2.12
PCOLCE-210ENST00000496269 CWF19L2Q2TBE0 894 aaKnown RBP28.27■■■□□ 2.12
PCOLCE-210ENST00000496269 ATP6V0A2Q9Y487 856 aa28.27■■■□□ 2.12
PCOLCE-210ENST00000496269 CDHR2Q9BYE9 1310 aa28.26■■■□□ 2.11
PCOLCE-210ENST00000496269 C1QTNF8P60827 252 aa28.26■■■□□ 2.11
PCOLCE-210ENST00000496269 FKBP5Q13451 457 aaPredicted RBP28.26■■■□□ 2.11
PCOLCE-210ENST00000496269 GRAPQ13588 217 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms