RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 WDR63Q8IWG1 891 aa26.64■■□□□ 1.86
COL9A2-211ENST00000496215 PLBD2Q8NHP8 589 aa26.64■■□□□ 1.86
COL9A2-211ENST00000496215 C7orf43Q8WVR3 580 aa26.64■■□□□ 1.86
COL9A2-211ENST00000496215 RNF123Q5XPI4 1314 aa26.64■■□□□ 1.85
COL9A2-211ENST00000496215 FANCIQ9NVI1 1328 aa26.64■■□□□ 1.85
COL9A2-211ENST00000496215 CRY2Q49AN0 593 aa26.63■■□□□ 1.85
COL9A2-211ENST00000496215 CCDC30Q5VVM6 783 aa26.63■■□□□ 1.85
COL9A2-211ENST00000496215 C3orf67Q6ZVT6 689 aa26.63■■□□□ 1.85
COL9A2-211ENST00000496215 TSPYL6Q8N831 410 aa26.63■■□□□ 1.85
COL9A2-211ENST00000496215 LAMB2P55268 1798 aa26.62■■□□□ 1.85
COL9A2-211ENST00000496215 KIF3CO14782 793 aa26.62■■□□□ 1.85
COL9A2-211ENST00000496215 DICER1Q9UPY3 1922 aaKnown RBP26.61■■□□□ 1.85
COL9A2-211ENST00000496215 LMNB1P20700 586 aa26.61■■□□□ 1.85
COL9A2-211ENST00000496215 GOLGA2Q08379 1002 aa26.61■■□□□ 1.85
COL9A2-211ENST00000496215 TCIRG1Q13488 830 aa26.61■■□□□ 1.85
COL9A2-211ENST00000496215 OLFM4Q6UX06 510 aa26.61■■□□□ 1.85
COL9A2-211ENST00000496215 ANKRD13DQ6ZTN6 518 aa26.61■■□□□ 1.85
COL9A2-211ENST00000496215 UTP14AQ9BVJ6 771 aaKnown RBP26.61■■□□□ 1.85
COL9A2-211ENST00000496215 TWISTNBQ3B726 338 aaPredicted RBP26.6■■□□□ 1.85
COL9A2-211ENST00000496215 NLRP10Q86W26 655 aa26.6■■□□□ 1.85
COL9A2-211ENST00000496215 NMRK2Q9NPI5 230 aa26.6■■□□□ 1.85
COL9A2-211ENST00000496215 SOGA3Q5TF21 947 aa26.59■■□□□ 1.85
COL9A2-211ENST00000496215 SLC51AQ86UW1 340 aa26.59■■□□□ 1.85
COL9A2-211ENST00000496215 SNED1Q8TER0 1413 aa26.58■■□□□ 1.85
COL9A2-211ENST00000496215 SYNE4Q8N205 404 aa26.58■■□□□ 1.85
COL9A2-211ENST00000496215 STK31Q9BXU1 1019 aa26.58■■□□□ 1.85
COL9A2-211ENST00000496215 PHAXQ9H814 394 aaKnown RBP26.58■■□□□ 1.85
COL9A2-211ENST00000496215 DDX60Q8IY21 1712 aaKnown RBP26.58■■□□□ 1.85
COL9A2-211ENST00000496215 RPGRQ92834 1020 aaKnown RBP26.57■■□□□ 1.84
COL9A2-211ENST00000496215 ZNF428Q96B54 188 aa26.57■■□□□ 1.84
COL9A2-211ENST00000496215 LTBP3Q9NS15 1303 aa26.57■■□□□ 1.84
COL9A2-211ENST00000496215 CCER2I3L3R5 266 aa26.56■■□□□ 1.84
COL9A2-211ENST00000496215 ALDH1B1P30837 517 aa26.55■■□□□ 1.84
COL9A2-211ENST00000496215 RIC3Q7Z5B4 369 aa26.55■■□□□ 1.84
COL9A2-211ENST00000496215 MYH16Q9H6N6 1097 aa26.55■■□□□ 1.84
COL9A2-211ENST00000496215 TRMT112Q9UI30 125 aaKnown RBP26.55■■□□□ 1.84
COL9A2-211ENST00000496215 SH3TC1Q8TE82 1336 aa26.55■■□□□ 1.84
COL9A2-211ENST00000496215 DDX58O95786 925 aaKnown RBP26.54■■□□□ 1.84
COL9A2-211ENST00000496215 HOXA10P31260 410 aaPredicted RBP26.54■■□□□ 1.84
COL9A2-211ENST00000496215 TAOK3Q9H2K8 898 aa26.54■■□□□ 1.84
COL9A2-211ENST00000496215 CCDC93Q567U6 631 aa26.53■■□□□ 1.84
COL9A2-211ENST00000496215 SLC10A5Q5PT55 438 aa26.53■■□□□ 1.84
COL9A2-211ENST00000496215 NLRP3Q96P20 1036 aa26.53■■□□□ 1.84
COL9A2-211ENST00000496215 ISCA1Q9BUE6 129 aa26.53■■□□□ 1.84
COL9A2-211ENST00000496215 ZC3H4Q9UPT8 1303 aaKnown RBP26.53■■□□□ 1.84
COL9A2-211ENST00000496215 CEP350Q5VT06 3117 aa26.53■■□□□ 1.84
COL9A2-211ENST00000496215 ATP5J2-PTCD1G3V325 749 aa26.52■■□□□ 1.84
COL9A2-211ENST00000496215 CACNA1FO60840 1977 aa26.51■■□□□ 1.83
COL9A2-211ENST00000496215 ZNF521Q96K83 1311 aa26.51■■□□□ 1.83
COL9A2-211ENST00000496215 TCERG1O14776 1098 aaKnown RBP26.51■■□□□ 1.83
COL9A2-211ENST00000496215 RBM17Q96I25 401 aaKnown RBP26.51■■□□□ 1.83
COL9A2-211ENST00000496215 SPINK5Q9NQ38 1064 aaPredicted RBP26.51■■□□□ 1.83
COL9A2-211ENST00000496215 HCLS1P14317 486 aaPredicted RBP26.5■■□□□ 1.83
COL9A2-211ENST00000496215 EXOSC9Q06265 439 aaKnown RBP26.5■■□□□ 1.83
COL9A2-211ENST00000496215 TAF1P21675 1872 aa26.5■■□□□ 1.83
COL9A2-211ENST00000496215 COL4A1P02462 1669 aa26.49■■□□□ 1.83
COL9A2-211ENST00000496215 KDM2BQ8NHM5 1336 aa26.48■■□□□ 1.83
COL9A2-211ENST00000496215 TRIM28Q13263 835 aaKnown RBP26.48■■□□□ 1.83
COL9A2-211ENST00000496215 CRAMP1Q96RY5 1269 aa26.48■■□□□ 1.83
COL9A2-211ENST00000496215 MYD88Q99836 296 aa26.48■■□□□ 1.83
COL9A2-211ENST00000496215 COL4A5P29400 1685 aa26.47■■□□□ 1.83
COL9A2-211ENST00000496215 FKBP4Q02790 459 aaKnown RBP eCLIP26.47■■□□□ 1.83
COL9A2-211ENST00000496215 WDR90Q96KV7 1748 aa26.46■■□□□ 1.83
COL9A2-211ENST00000496215 GLTPD2A6NH11 291 aa26.46■■□□□ 1.83
COL9A2-211ENST00000496215 PPEF1O14829 653 aaPredicted RBP26.46■■□□□ 1.83
COL9A2-211ENST00000496215 SLC4A2P04920 1241 aa26.46■■□□□ 1.83
COL9A2-211ENST00000496215 RRAGCQ9HB90 399 aa26.46■■□□□ 1.83
COL9A2-211ENST00000496215 ZNF277Q9NRM2 450 aaPredicted RBP26.46■■□□□ 1.83
COL9A2-211ENST00000496215 MAP3K2Q9Y2U5 619 aa26.46■■□□□ 1.83
COL9A2-211ENST00000496215 ABCC4O15439 1325 aa26.45■■□□□ 1.83
COL9A2-211ENST00000496215 RTKN2Q8IZC4 609 aa26.45■■□□□ 1.82
COL9A2-211ENST00000496215 FAM89AQ96GI7 184 aa26.45■■□□□ 1.82
COL9A2-211ENST00000496215 METTL22Q9BUU2 404 aaPredicted RBP26.45■■□□□ 1.82
COL9A2-211ENST00000496215 VAMP4O75379 141 aa26.44■■□□□ 1.82
COL9A2-211ENST00000496215 DIEXFQ68CQ4 756 aaKnown RBP26.44■■□□□ 1.82
COL9A2-211ENST00000496215 KSR2Q6VAB6 950 aa26.44■■□□□ 1.82
COL9A2-211ENST00000496215 PI4KAP2A4QPH2 592 aa26.43■■□□□ 1.82
COL9A2-211ENST00000496215 FLIIQ13045 1269 aa26.43■■□□□ 1.82
COL9A2-211ENST00000496215 CC2D2BQ6DHV5 1058 aa26.43■■□□□ 1.82
COL9A2-211ENST00000496215 G2E3Q7L622 706 aa26.43■■□□□ 1.82
COL9A2-211ENST00000496215 PI4KAP1Q8N8J0 262 aa26.43■■□□□ 1.82
COL9A2-211ENST00000496215 CCDC191Q8NCU4 936 aa26.43■■□□□ 1.82
COL9A2-211ENST00000496215 LRRC37AA6NMS7 1700 aa26.42■■□□□ 1.82
COL9A2-211ENST00000496215 POTECB2RU33 542 aa26.42■■□□□ 1.82
COL9A2-211ENST00000496215 NEXNQ0ZGT2 675 aa26.42■■□□□ 1.82
COL9A2-211ENST00000496215 RTL5Q5HYW3 569 aaPredicted RBP26.42■■□□□ 1.82
COL9A2-211ENST00000496215 CWC25Q9NXE8 425 aaPredicted RBP26.42■■□□□ 1.82
COL9A2-211ENST00000496215 TOMM70O94826 608 aa26.41■■□□□ 1.82
COL9A2-211ENST00000496215 DDX46Q7L014 1031 aaKnown RBP26.41■■□□□ 1.82
COL9A2-211ENST00000496215 ZBTB38Q8NAP3 1195 aaPredicted RBP26.41■■□□□ 1.82
COL9A2-211ENST00000496215 IRS4O14654 1257 aaPredicted RBP26.4■■□□□ 1.82
COL9A2-211ENST00000496215 FKBP5Q13451 457 aaPredicted RBP26.4■■□□□ 1.82
COL9A2-211ENST00000496215 PSMD1Q99460 953 aa26.4■■□□□ 1.82
COL9A2-211ENST00000496215 E9PSI1 815 aa26.39■■□□□ 1.82
COL9A2-211ENST00000496215 HSP90B1P14625 803 aaKnown RBP26.39■■□□□ 1.82
COL9A2-211ENST00000496215 GRIPAP1Q4V328 841 aa26.39■■□□□ 1.82
COL9A2-211ENST00000496215 TMX4Q9H1E5 349 aaPredicted RBP26.39■■□□□ 1.82
COL9A2-211ENST00000496215 ZNF541Q9H0D2 1346 aa26.39■■□□□ 1.81
COL9A2-211ENST00000496215 PCCAP05165 728 aaPredicted RBP26.38■■□□□ 1.81
COL9A2-211ENST00000496215 GRAPQ13588 217 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms