RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 AMOTQ4VCS5 1084 aa15.58■□□□□ 0.08
PTPN7-217ENST00000495688 ARHGEF25Q86VW2 580 aa15.58■□□□□ 0.08
PTPN7-217ENST00000495688 ERC1Q8IUD2 1116 aa15.58■□□□□ 0.08
PTPN7-217ENST00000495688 JARID2Q92833 1246 aaPredicted RBP15.58■□□□□ 0.08
PTPN7-217ENST00000495688 CHMP4AQ9BY43 222 aa15.58■□□□□ 0.08
PTPN7-217ENST00000495688 TTC12Q9H892 705 aaPredicted RBP15.58■□□□□ 0.08
PTPN7-217ENST00000495688 PLCB2Q00722 1185 aa15.58■□□□□ 0.08
PTPN7-217ENST00000495688 C17orf53Q8N3J3 647 aaPredicted RBP15.58■□□□□ 0.08
PTPN7-217ENST00000495688 LINS1Q8NG48 757 aa15.58■□□□□ 0.08
PTPN7-217ENST00000495688 FAM13BQ9NYF5 915 aa15.58■□□□□ 0.08
PTPN7-217ENST00000495688 CHMP3Q9Y3E7 222 aa15.58■□□□□ 0.08
PTPN7-217ENST00000495688 HEG1Q9ULI3 1381 aa15.58■□□□□ 0.08
PTPN7-217ENST00000495688 IGKV5-2P06315 115 aa15.57■□□□□ 0.08
PTPN7-217ENST00000495688 MYL6BP14649 208 aa15.57■□□□□ 0.08
PTPN7-217ENST00000495688 ZKSCAN1P17029 563 aaPredicted RBP15.57■□□□□ 0.08
PTPN7-217ENST00000495688 G3BP1Q13283 466 aaKnown RBP eCLIP15.57■□□□□ 0.08
PTPN7-217ENST00000495688 PDIA6Q15084 440 aa15.57■□□□□ 0.08
PTPN7-217ENST00000495688 MAP4K1Q92918 833 aa15.57■□□□□ 0.08
PTPN7-217ENST00000495688 KCNB2Q92953 911 aa15.57■□□□□ 0.08
PTPN7-217ENST00000495688 FAM184AQ8NB25 1140 aa15.57■□□□□ 0.08
PTPN7-217ENST00000495688 TM6SF1Q9BZW5 370 aa15.57■□□□□ 0.08
PTPN7-217ENST00000495688 ATP6V1DQ9Y5K8 247 aa15.57■□□□□ 0.08
PTPN7-217ENST00000495688 SLC27A2O14975 620 aa15.56■□□□□ 0.08
PTPN7-217ENST00000495688 PIP4K2AP48426 406 aaPredicted RBP15.56■□□□□ 0.08
PTPN7-217ENST00000495688 CHGBP05060 677 aa15.56■□□□□ 0.08
PTPN7-217ENST00000495688 TERF1P54274 439 aa15.56■□□□□ 0.08
PTPN7-217ENST00000495688 CSPP1Q1MSJ5 1256 aa15.56■□□□□ 0.08
PTPN7-217ENST00000495688 EPHA10Q5JZY3 1008 aa15.56■□□□□ 0.08
PTPN7-217ENST00000495688 CDC37L1Q7L3B6 337 aa15.56■□□□□ 0.08
PTPN7-217ENST00000495688 ZNF589Q86UQ0 364 aaPredicted RBP15.56■□□□□ 0.08
PTPN7-217ENST00000495688 FSD1Q9BTV5 496 aa15.56■□□□□ 0.08
PTPN7-217ENST00000495688 NDUFB9Q9Y6M9 179 aa15.56■□□□□ 0.08
PTPN7-217ENST00000495688 AP5Z1O43299 807 aa15.55■□□□□ 0.08
PTPN7-217ENST00000495688 KIAA2012Q0VF49 1180 aa15.55■□□□□ 0.08
PTPN7-217ENST00000495688 ZSCAN31Q96LW9 406 aaPredicted RBP15.55■□□□□ 0.08
PTPN7-217ENST00000495688 FUCA2Q9BTY2 467 aa15.55■□□□□ 0.08
PTPN7-217ENST00000495688 DDX21Q9NR30 783 aaKnown RBP eCLIP15.55■□□□□ 0.08
PTPN7-217ENST00000495688 SH2B1Q9NRF2 756 aaPredicted RBP15.55■□□□□ 0.08
PTPN7-217ENST00000495688 UVSSAQ2YD98 709 aa15.55■□□□□ 0.08
PTPN7-217ENST00000495688 LARP1BQ659C4 914 aaKnown RBP15.55■□□□□ 0.08
PTPN7-217ENST00000495688 RIC3Q7Z5B4 369 aa15.55■□□□□ 0.08
PTPN7-217ENST00000495688 VSIG10Q8N0Z9 540 aa15.54■□□□□ 0.08
PTPN7-217ENST00000495688 STK3Q13188 491 aa15.54■□□□□ 0.08
PTPN7-217ENST00000495688 TTC6Q86TZ1 520 aa15.54■□□□□ 0.08
PTPN7-217ENST00000495688 PDCL3Q9H2J4 239 aa15.54■□□□□ 0.08
PTPN7-217ENST00000495688 CHD2O14647 1828 aaKnown RBP15.54■□□□□ 0.08
PTPN7-217ENST00000495688 ANKLE2Q86XL3 938 aa15.53■□□□□ 0.08
PTPN7-217ENST00000495688 UTYO14607 1347 aa15.53■□□□□ 0.08
PTPN7-217ENST00000495688 KDM4AO75164 1064 aa15.53■□□□□ 0.08
PTPN7-217ENST00000495688 NPHP4O75161 1426 aaPredicted RBP15.53■□□□□ 0.08
PTPN7-217ENST00000495688 LETM1O95202 739 aaPredicted RBP15.52■□□□□ 0.08
PTPN7-217ENST00000495688 DDX58O95786 925 aaKnown RBP15.52■□□□□ 0.08
PTPN7-217ENST00000495688 ZC3H6P61129 1189 aaKnown RBP15.52■□□□□ 0.08
PTPN7-217ENST00000495688 CAMK4Q16566 473 aa15.52■□□□□ 0.08
PTPN7-217ENST00000495688 GLIPR1L2Q4G1C9 344 aa15.52■□□□□ 0.08
PTPN7-217ENST00000495688 NCAPD2Q15021 1401 aa15.52■□□□□ 0.08
PTPN7-217ENST00000495688 DNTTIP2Q5QJE6 756 aaKnown RBP15.52■□□□□ 0.07
PTPN7-217ENST00000495688 ZNF790Q6PG37 636 aa15.52■□□□□ 0.07
PTPN7-217ENST00000495688 XAGE3Q8WTP9 111 aa15.52■□□□□ 0.07
PTPN7-217ENST00000495688 MYD88Q99836 296 aa15.52■□□□□ 0.07
PTPN7-217ENST00000495688 ADGRL3Q9HAR2 1447 aa15.52■□□□□ 0.07
PTPN7-217ENST00000495688 NEURL1BA8MQ27 555 aa15.51■□□□□ 0.07
PTPN7-217ENST00000495688 LIG1P18858 919 aa15.51■□□□□ 0.07
PTPN7-217ENST00000495688 TOB2Q14106 344 aaPredicted RBP15.51■□□□□ 0.07
PTPN7-217ENST00000495688 BLOC1S2Q6QNY1 142 aa15.51■□□□□ 0.07
PTPN7-217ENST00000495688 COPS6Q7L5N1 327 aa15.51■□□□□ 0.07
PTPN7-217ENST00000495688 NFATC2IPQ8NCF5 419 aa15.51■□□□□ 0.07
PTPN7-217ENST00000495688 SASS6Q6UVJ0 657 aa15.51■□□□□ 0.07
PTPN7-217ENST00000495688 ARID3AQ99856 593 aa15.51■□□□□ 0.07
PTPN7-217ENST00000495688 TFIP11Q9UBB9 837 aaKnown RBP15.51■□□□□ 0.07
PTPN7-217ENST00000495688 LARP1Q6PKG0 1096 aaKnown RBP15.51■□□□□ 0.07
PTPN7-217ENST00000495688 HDAC5Q9UQL6 1122 aa15.51■□□□□ 0.07
PTPN7-217ENST00000495688 PHRF1Q9P1Y6 1649 aaKnown RBP15.5■□□□□ 0.07
PTPN7-217ENST00000495688 RPS6KB1P23443 525 aa15.5■□□□□ 0.07
PTPN7-217ENST00000495688 GCKRQ14397 625 aa15.5■□□□□ 0.07
PTPN7-217ENST00000495688 PIBF1Q8WXW3 757 aa15.5■□□□□ 0.07
PTPN7-217ENST00000495688 COL15A1P39059 1388 aa15.5■□□□□ 0.07
PTPN7-217ENST00000495688 MED23Q9ULK4 1368 aa15.5■□□□□ 0.07
PTPN7-217ENST00000495688 HIP1O00291 1037 aa15.5■□□□□ 0.07
PTPN7-217ENST00000495688 PSMA5P28066 241 aa15.5■□□□□ 0.07
PTPN7-217ENST00000495688 NOLC1Q14978 699 aaKnown RBP eCLIP15.5■□□□□ 0.07
PTPN7-217ENST00000495688 TSC1Q92574 1164 aa15.5■□□□□ 0.07
PTPN7-217ENST00000495688 DBNLQ9UJU6 430 aaKnown RBP15.5■□□□□ 0.07
PTPN7-217ENST00000495688 CCDC129Q6ZRS4 1044 aa15.49■□□□□ 0.07
PTPN7-217ENST00000495688 SPC24Q8NBT2 197 aa15.49■□□□□ 0.07
PTPN7-217ENST00000495688 SEC62Q99442 399 aaKnown RBP15.49■□□□□ 0.07
PTPN7-217ENST00000495688 SNRKQ9NRH2 765 aa15.49■□□□□ 0.07
PTPN7-217ENST00000495688 CCDC9Q9Y3X0 531 aaKnown RBP15.49■□□□□ 0.07
PTPN7-217ENST00000495688 RGPD5Q99666 1765 aa15.49■□□□□ 0.07
PTPN7-217ENST00000495688 TAF5LO75529 589 aa15.49■□□□□ 0.07
PTPN7-217ENST00000495688 KRT85P78386 507 aa15.49■□□□□ 0.07
PTPN7-217ENST00000495688 NEXNQ0ZGT2 675 aa15.49■□□□□ 0.07
PTPN7-217ENST00000495688 ZNF496Q96IT1 587 aaPredicted RBP15.49■□□□□ 0.07
PTPN7-217ENST00000495688 USP16Q9Y5T5 823 aa15.49■□□□□ 0.07
PTPN7-217ENST00000495688 SIPA1L3O60292 1781 aaPredicted RBP15.49■□□□□ 0.07
PTPN7-217ENST00000495688 JAK2O60674 1132 aa15.48■□□□□ 0.07
PTPN7-217ENST00000495688 RNF20Q5VTR2 975 aa15.48■□□□□ 0.07
PTPN7-217ENST00000495688 CKAP2LQ8IYA6 745 aa15.48■□□□□ 0.07
PTPN7-217ENST00000495688 ERBB3P21860 1342 aa15.48■□□□□ 0.07
PTPN7-217ENST00000495688 OVOS2A0A0G2JMS6 1433 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms