RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 ZDHHC9Q9Y397 364 aa17.89■□□□□ 0.45
CHTOP-206ENST00000495554 G3BP1Q13283 466 aaKnown RBP eCLIP17.88■□□□□ 0.45
CHTOP-206ENST00000495554 RUFY2Q8WXA3 655 aa17.88■□□□□ 0.45
CHTOP-206ENST00000495554 AK9Q5TCS8 1911 aa17.88■□□□□ 0.45
CHTOP-206ENST00000495554 SASH1O94885 1247 aa17.88■□□□□ 0.45
CHTOP-206ENST00000495554 UPF3BQ9BZI7 483 aaKnown RBP17.88■□□□□ 0.45
CHTOP-206ENST00000495554 LSG1Q9H089 658 aaKnown RBP17.88■□□□□ 0.45
CHTOP-206ENST00000495554 CWC27Q6UX04 472 aaKnown RBP17.87■□□□□ 0.45
CHTOP-206ENST00000495554 AACSQ86V21 672 aa17.87■□□□□ 0.45
CHTOP-206ENST00000495554 DIAPH3Q9NSV4 1193 aa17.87■□□□□ 0.45
CHTOP-206ENST00000495554 FAM43AQ8N2R8 423 aa17.86■□□□□ 0.45
CHTOP-206ENST00000495554 JARID2Q92833 1246 aaPredicted RBP17.86■□□□□ 0.45
CHTOP-206ENST00000495554 LMBRD1Q9NUN5 540 aa17.86■□□□□ 0.45
CHTOP-206ENST00000495554 KCPQ6ZWJ8 1503 aa17.86■□□□□ 0.45
CHTOP-206ENST00000495554 UBR2Q8IWV8 1755 aa17.86■□□□□ 0.45
CHTOP-206ENST00000495554 PLBD2Q8NHP8 589 aa17.86■□□□□ 0.45
CHTOP-206ENST00000495554 EVI5LQ96CN4 794 aa17.86■□□□□ 0.45
CHTOP-206ENST00000495554 PANK2Q9BZ23 570 aa17.86■□□□□ 0.45
CHTOP-206ENST00000495554 BTG4Q9NY30 223 aa17.86■□□□□ 0.45
CHTOP-206ENST00000495554 ERBB4Q15303 1308 aa17.85■□□□□ 0.45
CHTOP-206ENST00000495554 LAMB4A4D0S4 1761 aa17.85■□□□□ 0.45
CHTOP-206ENST00000495554 ATP5J2-PTCD1G3V325 749 aa17.85■□□□□ 0.45
CHTOP-206ENST00000495554 PTCD1O75127 700 aaKnown RBP17.85■□□□□ 0.45
CHTOP-206ENST00000495554 A1BGP04217 495 aa17.85■□□□□ 0.45
CHTOP-206ENST00000495554 SNX14Q9Y5W7 946 aa17.85■□□□□ 0.45
CHTOP-206ENST00000495554 GAS2L3Q86XJ1 694 aa17.85■□□□□ 0.45
CHTOP-206ENST00000495554 KLHDC4Q8TBB5 520 aa17.85■□□□□ 0.45
CHTOP-206ENST00000495554 CASP7P55210 303 aa17.84■□□□□ 0.45
CHTOP-206ENST00000495554 TTLL7Q6ZT98 887 aa17.84■□□□□ 0.45
CHTOP-206ENST00000495554 EAF2Q96CJ1 260 aaPredicted RBP17.84■□□□□ 0.45
CHTOP-206ENST00000495554 BRD1O95696 1058 aa17.84■□□□□ 0.45
CHTOP-206ENST00000495554 NOL8Q76FK4 1167 aaKnown RBP17.84■□□□□ 0.45
CHTOP-206ENST00000495554 PAPPAQ13219 1627 aa17.83■□□□□ 0.45
CHTOP-206ENST00000495554 TNS2Q63HR2 1409 aa17.83■□□□□ 0.45
CHTOP-206ENST00000495554 ARFGEF2Q9Y6D5 1785 aa17.83■□□□□ 0.44
CHTOP-206ENST00000495554 RFX5P48382 616 aaPredicted RBP17.83■□□□□ 0.44
CHTOP-206ENST00000495554 HIP1O00291 1037 aa17.82■□□□□ 0.44
CHTOP-206ENST00000495554 RABL6Q3YEC7 729 aaPredicted RBP17.82■□□□□ 0.44
CHTOP-206ENST00000495554 UBE3BQ7Z3V4 1068 aa17.82■□□□□ 0.44
CHTOP-206ENST00000495554 A0A087WZG4 1122 aa17.82■□□□□ 0.44
CHTOP-206ENST00000495554 RASEFQ8IZ41 740 aa17.82■□□□□ 0.44
CHTOP-206ENST00000495554 SIL1Q9H173 461 aa17.82■□□□□ 0.44
CHTOP-206ENST00000495554 COL15A1P39059 1388 aa17.81■□□□□ 0.44
CHTOP-206ENST00000495554 TOGARAM1Q9Y4F4 1720 aa17.81■□□□□ 0.44
CHTOP-206ENST00000495554 PRPF40AO75400 957 aaKnown RBP17.81■□□□□ 0.44
CHTOP-206ENST00000495554 TTC14Q96N46 770 aa17.81■□□□□ 0.44
CHTOP-206ENST00000495554 CCDC8Q9H0W5 538 aaPredicted RBP17.81■□□□□ 0.44
CHTOP-206ENST00000495554 COPRSQ9NQ92 184 aa17.81■□□□□ 0.44
CHTOP-206ENST00000495554 PTPN12Q05209 780 aaKnown RBP17.8■□□□□ 0.44
CHTOP-206ENST00000495554 AFDNP55196 1824 aaKnown RBP17.8■□□□□ 0.44
CHTOP-206ENST00000495554 H7C1W4 665 aa17.8■□□□□ 0.44
CHTOP-206ENST00000495554 PIGBQ92521 554 aa17.8■□□□□ 0.44
CHTOP-206ENST00000495554 NCLP19338 710 aaKnown RBP17.79■□□□□ 0.44
CHTOP-206ENST00000495554 ZNF445P59923 1031 aa17.79■□□□□ 0.44
CHTOP-206ENST00000495554 TLR7Q9NYK1 1049 aaKnown RBP17.79■□□□□ 0.44
CHTOP-206ENST00000495554 TMOD3Q9NYL9 352 aa17.79■□□□□ 0.44
CHTOP-206ENST00000495554 ASAP1Q9ULH1 1129 aa17.79■□□□□ 0.44
CHTOP-206ENST00000495554 PTH1RQ03431 593 aa17.79■□□□□ 0.44
CHTOP-206ENST00000495554 CAVIN1Q6NZI2 390 aaKnown RBP17.79■□□□□ 0.44
CHTOP-206ENST00000495554 KCNB2Q92953 911 aa17.79■□□□□ 0.44
CHTOP-206ENST00000495554 LIMCH1Q9UPQ0 1083 aa17.79■□□□□ 0.44
CHTOP-206ENST00000495554 DISP2A7MBM2 1401 aa17.78■□□□□ 0.44
CHTOP-206ENST00000495554 AK2P54819 239 aa17.78■□□□□ 0.44
CHTOP-206ENST00000495554 ROBO1Q9Y6N7 1651 aa17.78■□□□□ 0.44
CHTOP-206ENST00000495554 NAP1L5Q96NT1 182 aaPredicted RBP17.78■□□□□ 0.44
CHTOP-206ENST00000495554 TM6SF1Q9BZW5 370 aa17.78■□□□□ 0.44
CHTOP-206ENST00000495554 CCDC171Q6TFL3 1326 aa17.77■□□□□ 0.44
CHTOP-206ENST00000495554 FOXO4P98177 505 aa17.77■□□□□ 0.44
CHTOP-206ENST00000495554 FOXD4L5Q5VV16 416 aaPredicted RBP17.77■□□□□ 0.44
CHTOP-206ENST00000495554 FOXD4L4Q8WXT5 416 aaPredicted RBP17.77■□□□□ 0.44
CHTOP-206ENST00000495554 SNRKQ9NRH2 765 aa17.77■□□□□ 0.44
CHTOP-206ENST00000495554 WDR33Q9C0J8 1336 aaKnown RBP17.77■□□□□ 0.43
CHTOP-206ENST00000495554 CASTP20810 708 aaKnown RBP17.77■□□□□ 0.43
CHTOP-206ENST00000495554 ZSCAN23Q3MJ62 389 aa17.77■□□□□ 0.43
CHTOP-206ENST00000495554 ATG3Q9NT62 314 aa17.77■□□□□ 0.43
CHTOP-206ENST00000495554 ZKSCAN1P17029 563 aaPredicted RBP17.76■□□□□ 0.43
CHTOP-206ENST00000495554 NECTIN1Q15223 517 aa17.76■□□□□ 0.43
CHTOP-206ENST00000495554 PRPF40BQ6NWY9 871 aaKnown RBP17.76■□□□□ 0.43
CHTOP-206ENST00000495554 GPT2Q8TD30 523 aa17.76■□□□□ 0.43
CHTOP-206ENST00000495554 BOLA2Q9H3K6 86 aa17.76■□□□□ 0.43
CHTOP-206ENST00000495554 ZBTB3Q9H5J0 574 aa17.76■□□□□ 0.43
CHTOP-206ENST00000495554 NUP188Q5SRE5 1749 aa17.76■□□□□ 0.43
CHTOP-206ENST00000495554 RUFY3Q7L099 469 aa17.76■□□□□ 0.43
CHTOP-206ENST00000495554 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.76■□□□□ 0.43
CHTOP-206ENST00000495554 COL14A1Q05707 1796 aaKnown RBP17.75■□□□□ 0.43
CHTOP-206ENST00000495554 MBD3O95983 291 aa17.75■□□□□ 0.43
CHTOP-206ENST00000495554 NMIQ13287 307 aaPredicted RBP17.75■□□□□ 0.43
CHTOP-206ENST00000495554 VPS53Q5VIR6 699 aa17.75■□□□□ 0.43
CHTOP-206ENST00000495554 LMBR1LQ6UX01 489 aa17.75■□□□□ 0.43
CHTOP-206ENST00000495554 MAP4K1Q92918 833 aa17.75■□□□□ 0.43
CHTOP-206ENST00000495554 FAM227BQ96M60 508 aa17.75■□□□□ 0.43
CHTOP-206ENST00000495554 FSD1Q9BTV5 496 aa17.75■□□□□ 0.43
CHTOP-206ENST00000495554 ZSWIM6Q9HCJ5 1215 aa17.75■□□□□ 0.43
CHTOP-206ENST00000495554 AHDC1Q5TGY3 1603 aaPredicted RBP17.75■□□□□ 0.43
CHTOP-206ENST00000495554 DNAJC10Q8IXB1 793 aa17.75■□□□□ 0.43
CHTOP-206ENST00000495554 CWC25Q9NXE8 425 aaPredicted RBP17.75■□□□□ 0.43
CHTOP-206ENST00000495554 CHAMP1Q96JM3 812 aa17.74■□□□□ 0.43
CHTOP-206ENST00000495554 JAKMIP1Q96N16 626 aaKnown RBP17.74■□□□□ 0.43
CHTOP-206ENST00000495554 CYP46A1Q9Y6A2 500 aa17.74■□□□□ 0.43
CHTOP-206ENST00000495554 COL16A1Q07092 1604 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms