RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 ZNF775Q96BV0 537 aaPredicted RBP8.86□□□□□ -0.99
SRRM1-218ENST00000494934 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.86□□□□□ -0.991e-8■■■■■ 180.4
SRRM1-218ENST00000494934 TGFBR3LH3BV60 316 aa8.85□□□□□ -0.99
SRRM1-218ENST00000494934 TREHO43280 583 aa8.85□□□□□ -0.99
SRRM1-218ENST00000494934 BNIP3LO60238 219 aa8.85□□□□□ -0.99
SRRM1-218ENST00000494934 SAMD5Q5TGI4 173 aa8.85□□□□□ -0.99
SRRM1-218ENST00000494934 GTPBP3Q969Y2 492 aaKnown RBP8.85□□□□□ -0.99
SRRM1-218ENST00000494934 GMCL1Q96IK5 515 aa8.85□□□□□ -0.99
SRRM1-218ENST00000494934 BRPF3Q9ULD4 1205 aa8.85□□□□□ -0.99
SRRM1-218ENST00000494934 H7C1W4 665 aa8.84□□□□□ -0.99
SRRM1-218ENST00000494934 GPR25O00155 361 aa8.84□□□□□ -0.99
SRRM1-218ENST00000494934 EFSO43281 561 aa8.84□□□□□ -0.99
SRRM1-218ENST00000494934 RECKO95980 971 aa8.84□□□□□ -0.99
SRRM1-218ENST00000494934 TYRO3Q06418 890 aa8.84□□□□□ -0.99
SRRM1-218ENST00000494934 GAS6Q14393 721 aa8.84□□□□□ -0.99
SRRM1-218ENST00000494934 DSC3Q14574 896 aa8.84□□□□□ -0.99
SRRM1-218ENST00000494934 COL19A1Q14993 1142 aa8.84□□□□□ -0.99
SRRM1-218ENST00000494934 EAPPQ56P03 285 aaPredicted RBP8.84□□□□□ -0.99
SRRM1-218ENST00000494934 ZNF326Q5BKZ1 582 aaKnown RBP8.84□□□□□ -0.99
SRRM1-218ENST00000494934 IER5Q5VY09 327 aa8.84□□□□□ -0.99
SRRM1-218ENST00000494934 PGBD3Q8N328 593 aa8.84□□□□□ -0.99
SRRM1-218ENST00000494934 IFT43Q96FT9 208 aa8.84□□□□□ -0.99
SRRM1-218ENST00000494934 FAM129BQ96TA1 746 aa8.84□□□□□ -0.99
SRRM1-218ENST00000494934 OPLAHO14841 1288 aa8.83□□□□□ -1
SRRM1-218ENST00000494934 TNP2Q05952 138 aa8.83□□□□□ -1
SRRM1-218ENST00000494934 EFHC2Q5JST6 749 aa8.83□□□□□ -1
SRRM1-218ENST00000494934 BTLAQ7Z6A9 289 aa8.83□□□□□ -1
SRRM1-218ENST00000494934 STRN4Q9NRL3 753 aa8.83□□□□□ -1
SRRM1-218ENST00000494934 CDC14CA4D256 554 aa8.82□□□□□ -1
SRRM1-218ENST00000494934 FAM157BP0CG42 384 aa8.82□□□□□ -1
SRRM1-218ENST00000494934 INPP5BP32019 993 aa8.82□□□□□ -1
SRRM1-218ENST00000494934 KRT76Q01546 638 aa8.82□□□□□ -1
SRRM1-218ENST00000494934 GRIN2CQ14957 1233 aa8.82□□□□□ -1
SRRM1-218ENST00000494934 ALKBH2Q6NS38 261 aa8.82□□□□□ -1
SRRM1-218ENST00000494934 SV2AQ7L0J3 742 aa8.82□□□□□ -1
SRRM1-218ENST00000494934 ABTB2Q8N961 1025 aa8.82□□□□□ -1
SRRM1-218ENST00000494934 RNF19AQ9NV58 838 aa8.82□□□□□ -1
SRRM1-218ENST00000494934 PCDHGC4Q9Y5F7 938 aa8.82□□□□□ -1
SRRM1-218ENST00000494934 ATXN7O15265 892 aaPredicted RBP8.81□□□□□ -1
SRRM1-218ENST00000494934 MICAL2O94851 1124 aa8.81□□□□□ -1
SRRM1-218ENST00000494934 VAMP1P23763 118 aa8.81□□□□□ -1
SRRM1-218ENST00000494934 BRD2P25440 801 aaKnown RBP8.81□□□□□ -1
SRRM1-218ENST00000494934 AAMPQ13685 434 aa8.81□□□□□ -1
SRRM1-218ENST00000494934 TREML1Q86YW5 311 aa8.81□□□□□ -1
SRRM1-218ENST00000494934 ABHD17AQ96GS6 310 aa8.81□□□□□ -1
SRRM1-218ENST00000494934 SETDB2Q96T68 719 aa8.81□□□□□ -1
SRRM1-218ENST00000494934 ANKIB1Q9P2G1 1089 aa8.81□□□□□ -1
SRRM1-218ENST00000494934 POLIQ9UNA4 740 aa8.81□□□□□ -1
SRRM1-218ENST00000494934 MAPTP10636 758 aaKnown RBP8.8□□□□□ -1
SRRM1-218ENST00000494934 TCF3P15923 654 aa8.8□□□□□ -1
SRRM1-218ENST00000494934 EHHADHQ08426 723 aa8.8□□□□□ -1
SRRM1-218ENST00000494934 RNFT1Q5M7Z0 435 aa8.8□□□□□ -1
SRRM1-218ENST00000494934 GJD3Q8N144 294 aa8.8□□□□□ -1
SRRM1-218ENST00000494934 EDEM1Q92611 657 aa8.8□□□□□ -1
SRRM1-218ENST00000494934 CITED4Q96RK1 184 aa8.8□□□□□ -1
SRRM1-218ENST00000494934 CFHR5Q9BXR6 569 aa8.8□□□□□ -1
SRRM1-218ENST00000494934 DCDC2BA2VCK2 349 aa8.79□□□□□ -1
SRRM1-218ENST00000494934 ZAP70P43403 619 aa8.79□□□□□ -1
SRRM1-218ENST00000494934 IDH3AP50213 366 aa8.79□□□□□ -1
SRRM1-218ENST00000494934 SFSWAPQ12872 951 aaKnown RBP8.79□□□□□ -1
SRRM1-218ENST00000494934 FIGNL1Q6PIW4 674 aa8.79□□□□□ -1
SRRM1-218ENST00000494934 TMC1Q8TDI8 760 aa8.79□□□□□ -1
SRRM1-218ENST00000494934 C2CD2LO14523 706 aa8.78□□□□□ -1
SRRM1-218ENST00000494934 PDGFAP04085 211 aa8.78□□□□□ -1
SRRM1-218ENST00000494934 MAPK8P45983 427 aa8.78□□□□□ -1
SRRM1-218ENST00000494934 KCNQ4P56696 695 aa8.78□□□□□ -1
SRRM1-218ENST00000494934 DNM1Q05193 864 aaKnown RBP8.78□□□□□ -1
SRRM1-218ENST00000494934 MRPL58Q14197 206 aaKnown RBP8.78□□□□□ -1
SRRM1-218ENST00000494934 HIF1AQ16665 826 aa8.78□□□□□ -1
SRRM1-218ENST00000494934 DMRTB1Q96MA1 342 aa8.78□□□□□ -1
SRRM1-218ENST00000494934 WWC3Q9ULE0 1092 aa8.78□□□□□ -1
SRRM1-218ENST00000494934 USP20Q9Y2K6 914 aa8.78□□□□□ -1
SRRM1-218ENST00000494934 KHNYNO15037 678 aaKnown RBP8.77□□□□□ -1.01
SRRM1-218ENST00000494934 MZF1P28698 734 aaPredicted RBP8.77□□□□□ -1.01
SRRM1-218ENST00000494934 CTBSQ01459 385 aa8.77□□□□□ -1.01
SRRM1-218ENST00000494934 TREML4Q6UXN2 200 aa8.77□□□□□ -1.01
SRRM1-218ENST00000494934 ALKBH8Q96BT7 664 aaKnown RBP8.77□□□□□ -1.01
SRRM1-218ENST00000494934 CEP63Q96MT8 703 aa8.77□□□□□ -1.01
SRRM1-218ENST00000494934 FAM161BQ96MY7 647 aa8.77□□□□□ -1.01
SRRM1-218ENST00000494934 BRD7Q9NPI1 651 aa8.77□□□□□ -1.01
SRRM1-218ENST00000494934 ATXN7L1Q9ULK2 861 aaPredicted RBP8.77□□□□□ -1.01
SRRM1-218ENST00000494934 GJA3Q9Y6H8 435 aa8.77□□□□□ -1.01
SRRM1-218ENST00000494934 LDHBP07195 334 aaKnown RBP8.76□□□□□ -1.01
SRRM1-218ENST00000494934 LDLRAD1Q5T700 205 aa8.76□□□□□ -1.01
SRRM1-218ENST00000494934 COL25A1Q9BXS0 654 aaPredicted RBP8.76□□□□□ -1.01
SRRM1-218ENST00000494934 NIF3L1Q9GZT8 377 aa8.76□□□□□ -1.01
SRRM1-218ENST00000494934 NEUROD4Q9HD90 331 aa8.76□□□□□ -1.01
SRRM1-218ENST00000494934 KCNMB2Q9Y691 235 aa8.76□□□□□ -1.01
SRRM1-218ENST00000494934 A6NHS1 94 aa8.75□□□□□ -1.01
SRRM1-218ENST00000494934 WFS1O76024 890 aa8.75□□□□□ -1.01
SRRM1-218ENST00000494934 CD33P20138 364 aa8.75□□□□□ -1.01
SRRM1-218ENST00000494934 GMPRP36959 345 aa8.75□□□□□ -1.01
SRRM1-218ENST00000494934 TSNAXIP1Q2TAA8 658 aa8.75□□□□□ -1.01
SRRM1-218ENST00000494934 GPR152Q8TDT2 470 aa8.75□□□□□ -1.01
SRRM1-218ENST00000494934 SLC16A10Q8TF71 515 aa8.75□□□□□ -1.01
SRRM1-218ENST00000494934 IRF7Q92985 503 aa8.75□□□□□ -1.01
SRRM1-218ENST00000494934 FGFR3P22607 806 aa8.74□□□□□ -1.01
SRRM1-218ENST00000494934 ARSDP51689 593 aa8.74□□□□□ -1.01
SRRM1-218ENST00000494934 PLCB3Q01970 1234 aa8.74□□□□□ -1.01
SRRM1-218ENST00000494934 PDE3BQ13370 1112 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms