RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 ARXQ96QS3 562 aa15.21■□□□□ 0.03
BRD3-206ENST00000494743 C1orf115Q9H7X2 142 aa15.21■□□□□ 0.03
BRD3-206ENST00000494743 BCL2L12Q9HB09 334 aa15.21■□□□□ 0.03
BRD3-206ENST00000494743 C4AP0C0L4 1744 aa15.2■□□□□ 0.02
BRD3-206ENST00000494743 UBN2Q6ZU65 1347 aa15.2■□□□□ 0.02
BRD3-206ENST00000494743 USP42Q9H9J4 1324 aaKnown RBP15.2■□□□□ 0.02
BRD3-206ENST00000494743 PHF14O94880 888 aa15.2■□□□□ 0.02
BRD3-206ENST00000494743 CASP7P55210 303 aa15.2■□□□□ 0.02
BRD3-206ENST00000494743 TRAPPC3LQ5T215 181 aa15.2■□□□□ 0.02
BRD3-206ENST00000494743 B4GALNT3Q6L9W6 998 aa15.2■□□□□ 0.02
BRD3-206ENST00000494743 CWC25Q9NXE8 425 aaPredicted RBP15.2■□□□□ 0.02
BRD3-206ENST00000494743 H7C1W4 665 aa15.19■□□□□ 0.02
BRD3-206ENST00000494743 GNAI2P04899 355 aa15.19■□□□□ 0.02
BRD3-206ENST00000494743 UBTFL1P0CB47 393 aaPredicted RBP15.19■□□□□ 0.02
BRD3-206ENST00000494743 USPL1Q5W0Q7 1092 aa15.19■□□□□ 0.02
BRD3-206ENST00000494743 NLRP10Q86W26 655 aa15.19■□□□□ 0.02
BRD3-206ENST00000494743 CCDC136Q96JN2 1154 aa15.19■□□□□ 0.02
BRD3-206ENST00000494743 C9orf78Q9NZ63 289 aaPredicted RBP15.19■□□□□ 0.02
BRD3-206ENST00000494743 SRP68Q9UHB9 627 aaKnown RBP15.19■□□□□ 0.02
BRD3-206ENST00000494743 ZNF652Q9Y2D9 606 aa15.19■□□□□ 0.02
BRD3-206ENST00000494743 KDM2BQ8NHM5 1336 aa15.18■□□□□ 0.02
BRD3-206ENST00000494743 CEP85Q6P2H3 762 aa15.18■□□□□ 0.02
BRD3-206ENST00000494743 SIRT2Q8IXJ6 389 aa15.18■□□□□ 0.02
BRD3-206ENST00000494743 ANKRD36CQ5JPF3 1778 aa15.18■□□□□ 0.02
BRD3-206ENST00000494743 ZPR1O75312 459 aa15.17■□□□□ 0.02
BRD3-206ENST00000494743 GPTP24298 496 aa15.17■□□□□ 0.02
BRD3-206ENST00000494743 RFC4P35249 363 aa15.17■□□□□ 0.02
BRD3-206ENST00000494743 HDAC1Q13547 482 aaPredicted RBP15.17■□□□□ 0.02
BRD3-206ENST00000494743 ANKRD44Q8N8A2 993 aa15.17■□□□□ 0.02
BRD3-206ENST00000494743 KAZALD1Q96I82 304 aa15.17■□□□□ 0.02
BRD3-206ENST00000494743 SUCLG2Q96I99 432 aa15.17■□□□□ 0.02
BRD3-206ENST00000494743 TFCP2L1Q9NZI6 479 aa15.17■□□□□ 0.02
BRD3-206ENST00000494743 LRRFIP2Q9Y608 721 aaKnown RBP15.17■□□□□ 0.02
BRD3-206ENST00000494743 IGHDP01880 384 aa15.16■□□□□ 0.02
BRD3-206ENST00000494743 PCCAP05165 728 aaPredicted RBP15.16■□□□□ 0.02
BRD3-206ENST00000494743 GPR162Q16538 588 aa15.16■□□□□ 0.02
BRD3-206ENST00000494743 PARP10Q53GL7 1025 aa15.16■□□□□ 0.02
BRD3-206ENST00000494743 UBE3BQ7Z3V4 1068 aa15.16■□□□□ 0.02
BRD3-206ENST00000494743 RPAP2Q8IXW5 612 aaPredicted RBP15.16■□□□□ 0.02
BRD3-206ENST00000494743 ZBTB38Q8NAP3 1195 aaPredicted RBP15.16■□□□□ 0.02
BRD3-206ENST00000494743 PNPLA7Q6ZV29 1317 aa15.16■□□□□ 0.02
BRD3-206ENST00000494743 NUP98P52948 1817 aa15.15■□□□□ 0.02
BRD3-206ENST00000494743 GYS1P13807 737 aa15.15■□□□□ 0.02
BRD3-206ENST00000494743 MTX1Q13505 466 aa15.15■□□□□ 0.02
BRD3-206ENST00000494743 SLC15A2Q16348 729 aa15.15■□□□□ 0.02
BRD3-206ENST00000494743 TBC1D9BQ66K14 1250 aa15.15■□□□□ 0.02
BRD3-206ENST00000494743 FLAD1Q8NFF5 587 aa15.15■□□□□ 0.02
BRD3-206ENST00000494743 SGIP1Q9BQI5 828 aa15.15■□□□□ 0.02
BRD3-206ENST00000494743 HDAC5Q9UQL6 1122 aa15.15■□□□□ 0.02
BRD3-206ENST00000494743 NIP7Q9Y221 180 aaKnown RBP eCLIP15.15■□□□□ 0.02
BRD3-206ENST00000494743 AFDNP55196 1824 aaKnown RBP15.15■□□□□ 0.02
BRD3-206ENST00000494743 TUBGCP6Q96RT7 1819 aa15.15■□□□□ 0.02
BRD3-206ENST00000494743 NTSR2O95665 410 aa15.14■□□□□ 0.01
BRD3-206ENST00000494743 SUSD4Q5VX71 490 aa15.14■□□□□ 0.01
BRD3-206ENST00000494743 COL23A1Q86Y22 540 aaPredicted RBP15.14■□□□□ 0.01
BRD3-206ENST00000494743 MTFR1LQ9H019 292 aa15.14■□□□□ 0.01
BRD3-206ENST00000494743 COL24A1Q17RW2 1714 aa15.14■□□□□ 0.01
BRD3-206ENST00000494743 CDHR2Q9BYE9 1310 aa15.14■□□□□ 0.01
BRD3-206ENST00000494743 RABL6Q3YEC7 729 aaPredicted RBP15.13■□□□□ 0.01
BRD3-206ENST00000494743 EPHA10Q5JZY3 1008 aa15.13■□□□□ 0.01
BRD3-206ENST00000494743 JARID2Q92833 1246 aaPredicted RBP15.13■□□□□ 0.01
BRD3-206ENST00000494743 RWDD1Q9H446 243 aaPredicted RBP15.13■□□□□ 0.01
BRD3-206ENST00000494743 BICC1Q9H694 974 aaKnown RBP15.13■□□□□ 0.01
BRD3-206ENST00000494743 STK32BQ9NY57 414 aa15.13■□□□□ 0.01
BRD3-206ENST00000494743 QSER1Q2KHR3 1735 aa15.12■□□□□ 0.01
BRD3-206ENST00000494743 ATP8B2P98198 1209 aa15.12■□□□□ 0.01
BRD3-206ENST00000494743 CENPQQ7L2Z9 268 aaPredicted RBP15.12■□□□□ 0.01
BRD3-206ENST00000494743 FAM89AQ96GI7 184 aa15.12■□□□□ 0.01
BRD3-206ENST00000494743 UTP14AQ9BVJ6 771 aaKnown RBP15.12■□□□□ 0.01
BRD3-206ENST00000494743 PLA2G12BQ9BX93 195 aa15.12■□□□□ 0.01
BRD3-206ENST00000494743 TRMT112Q9UI30 125 aaKnown RBP15.12■□□□□ 0.01
BRD3-206ENST00000494743 PNMA6EA0A0J9YXQ4 647 aa15.11■□□□□ 0.01
BRD3-206ENST00000494743 HSPA6P17066 643 aa15.11■□□□□ 0.01
BRD3-206ENST00000494743 FOXO4P98177 505 aa15.11■□□□□ 0.01
BRD3-206ENST00000494743 POLA2Q14181 598 aa15.11■□□□□ 0.01
BRD3-206ENST00000494743 NFIXQ14938 502 aa15.11■□□□□ 0.01
BRD3-206ENST00000494743 PPP1R42Q7Z4L9 355 aa15.11■□□□□ 0.01
BRD3-206ENST00000494743 SYNE4Q8N205 404 aa15.11■□□□□ 0.01
BRD3-206ENST00000494743 SSH3Q8TE77 659 aa15.11■□□□□ 0.01
BRD3-206ENST00000494743 SH3TC1Q8TE82 1336 aa15.11■□□□□ 0.01
BRD3-206ENST00000494743 CARMIL3Q8ND23 1372 aa15.11■□□□□ 0.01
BRD3-206ENST00000494743 TM4SF1P30408 202 aa15.1■□□□□ 0.01
BRD3-206ENST00000494743 RTL5Q5HYW3 569 aaPredicted RBP15.1■□□□□ 0.01
BRD3-206ENST00000494743 SMC5Q8IY18 1101 aa15.1■□□□□ 0.01
BRD3-206ENST00000494743 SETDB2Q96T68 719 aa15.1■□□□□ 0.01
BRD3-206ENST00000494743 IRS4O14654 1257 aaPredicted RBP15.09■□□□□ 0.01
BRD3-206ENST00000494743 HMMRO75330 724 aa15.09■□□□□ 0.01
BRD3-206ENST00000494743 BICDL1Q6ZP65 573 aa15.09■□□□□ 0.01
BRD3-206ENST00000494743 SRGAP3O43295 1099 aa15.08■□□□□ 0
BRD3-206ENST00000494743 PELP1Q8IZL8 1130 aaKnown RBP15.08■□□□□ 0
BRD3-206ENST00000494743 NYXQ9GZU5 481 aa15.08■□□□□ 0
BRD3-206ENST00000494743 DCTPP1Q9H773 170 aa15.08■□□□□ 0
BRD3-206ENST00000494743 ABCC12Q96J65 1359 aa15.08■□□□□ 0
BRD3-206ENST00000494743 FAM177BA6PVY3 158 aa15.07■□□□□ 0
BRD3-206ENST00000494743 CSF1RP07333 972 aa15.07■□□□□ 0
BRD3-206ENST00000494743 DDR1Q08345 913 aa15.07■□□□□ 0
BRD3-206ENST00000494743 LMBR1LQ6UX01 489 aa15.07■□□□□ 0
BRD3-206ENST00000494743 NUTM1Q86Y26 1132 aa15.07■□□□□ 0
BRD3-206ENST00000494743 NLGN1Q8N2Q7 840 aa15.07■□□□□ 0
BRD3-206ENST00000494743 GCC1Q96CN9 775 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms