RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 DDX60Q8IY21 1712 aaKnown RBP17.69■□□□□ 0.42
PDCD11-206ENST00000493610 PARP10Q53GL7 1025 aa17.68■□□□□ 0.42
PDCD11-206ENST00000493610 SLC10A5Q5PT55 438 aa17.68■□□□□ 0.42
PDCD11-206ENST00000493610 PRPF40BQ6NWY9 871 aaKnown RBP17.68■□□□□ 0.42
PDCD11-206ENST00000493610 NYXQ9GZU5 481 aa17.68■□□□□ 0.42
PDCD11-206ENST00000493610 CCER2I3L3R5 266 aa17.67■□□□□ 0.42
PDCD11-206ENST00000493610 TCERG1O14776 1098 aaKnown RBP17.67■□□□□ 0.42
PDCD11-206ENST00000493610 C21orf2O43822 256 aa17.67■□□□□ 0.42
PDCD11-206ENST00000493610 NPR1P16066 1061 aa17.67■□□□□ 0.42
PDCD11-206ENST00000493610 TWISTNBQ3B726 338 aaPredicted RBP17.67■□□□□ 0.42
PDCD11-206ENST00000493610 C9orf131Q5VYM1 1079 aa17.67■□□□□ 0.42
PDCD11-206ENST00000493610 OLFM4Q6UX06 510 aa17.67■□□□□ 0.42
PDCD11-206ENST00000493610 G2E3Q7L622 706 aa17.67■□□□□ 0.42
PDCD11-206ENST00000493610 ZNF428Q96B54 188 aa17.67■□□□□ 0.42
PDCD11-206ENST00000493610 COL4A1P02462 1669 aa17.67■□□□□ 0.42
PDCD11-206ENST00000493610 NPHP1O15259 732 aa17.66■□□□□ 0.42
PDCD11-206ENST00000493610 VAMP4O75379 141 aa17.66■□□□□ 0.42
PDCD11-206ENST00000493610 CNKSR1Q969H4 720 aa17.66■□□□□ 0.42
PDCD11-206ENST00000493610 ATP5J2-PTCD1G3V325 749 aa17.65■□□□□ 0.42
PDCD11-206ENST00000493610 HOXA10P31260 410 aaPredicted RBP17.65■□□□□ 0.42
PDCD11-206ENST00000493610 EXOSC9Q06265 439 aaKnown RBP17.65■□□□□ 0.42
PDCD11-206ENST00000493610 HSP90AB3PQ58FF7 597 aa17.65■□□□□ 0.42
PDCD11-206ENST00000493610 CCDC30Q5VVM6 783 aa17.65■□□□□ 0.42
PDCD11-206ENST00000493610 PPP1R42Q7Z4L9 355 aa17.65■□□□□ 0.42
PDCD11-206ENST00000493610 UTP14AQ9BVJ6 771 aaKnown RBP17.65■□□□□ 0.42
PDCD11-206ENST00000493610 ZNF219Q9P2Y4 722 aaPredicted RBP17.65■□□□□ 0.42
PDCD11-206ENST00000493610 DICER1Q9UPY3 1922 aaKnown RBP17.64■□□□□ 0.42
PDCD11-206ENST00000493610 TRIM28Q13263 835 aaKnown RBP17.64■□□□□ 0.41
PDCD11-206ENST00000493610 TIAM2Q8IVF5 1701 aa17.64■□□□□ 0.41
PDCD11-206ENST00000493610 TAF1P21675 1872 aa17.63■□□□□ 0.41
PDCD11-206ENST00000493610 RNF123Q5XPI4 1314 aa17.63■□□□□ 0.41
PDCD11-206ENST00000493610 HCLS1P14317 486 aaPredicted RBP17.62■□□□□ 0.41
PDCD11-206ENST00000493610 GTF2E1P29083 439 aaPredicted RBP17.62■□□□□ 0.41
PDCD11-206ENST00000493610 RNF181Q9P0P0 153 aa17.62■□□□□ 0.41
PDCD11-206ENST00000493610 LTBP3Q9NS15 1303 aa17.62■□□□□ 0.41
PDCD11-206ENST00000493610 CACNA1FO60840 1977 aa17.61■□□□□ 0.41
PDCD11-206ENST00000493610 MIER1Q8N108 512 aa17.61■□□□□ 0.41
PDCD11-206ENST00000493610 KIF3CO14782 793 aa17.6■□□□□ 0.41
PDCD11-206ENST00000493610 IGKV5-2P06315 115 aa17.6■□□□□ 0.41
PDCD11-206ENST00000493610 LMNB1P20700 586 aa17.6■□□□□ 0.41
PDCD11-206ENST00000493610 RIC3Q7Z5B4 369 aa17.6■□□□□ 0.41
PDCD11-206ENST00000493610 ZNF526Q8TF50 670 aaPredicted RBP17.6■□□□□ 0.41
PDCD11-206ENST00000493610 FAM89AQ96GI7 184 aa17.6■□□□□ 0.41
PDCD11-206ENST00000493610 CRAMP1Q96RY5 1269 aa17.6■□□□□ 0.41
PDCD11-206ENST00000493610 METTL22Q9BUU2 404 aaPredicted RBP17.6■□□□□ 0.41
PDCD11-206ENST00000493610 TRMT112Q9UI30 125 aaKnown RBP17.6■□□□□ 0.41
PDCD11-206ENST00000493610 COL4A5P29400 1685 aa17.59■□□□□ 0.41
PDCD11-206ENST00000493610 SH3TC1Q8TE82 1336 aa17.59■□□□□ 0.41
PDCD11-206ENST00000493610 SLC4A2P04920 1241 aa17.59■□□□□ 0.41
PDCD11-206ENST00000493610 GOLGA2Q08379 1002 aa17.59■□□□□ 0.41
PDCD11-206ENST00000493610 MYD88Q99836 296 aa17.59■□□□□ 0.41
PDCD11-206ENST00000493610 MAP3K2Q9Y2U5 619 aa17.59■□□□□ 0.41
PDCD11-206ENST00000493610 PI4KAP2A4QPH2 592 aa17.58■□□□□ 0.4
PDCD11-206ENST00000493610 ALDH1B1P30837 517 aa17.58■□□□□ 0.4
PDCD11-206ENST00000493610 KSR2Q6VAB6 950 aa17.58■□□□□ 0.4
PDCD11-206ENST00000493610 PI4KAP1Q8N8J0 262 aa17.58■□□□□ 0.4
PDCD11-206ENST00000493610 NLRP3Q96P20 1036 aa17.58■□□□□ 0.4
PDCD11-206ENST00000493610 ABCC4O15439 1325 aa17.57■□□□□ 0.4
PDCD11-206ENST00000493610 SLFN5Q08AF3 891 aa17.57■□□□□ 0.4
PDCD11-206ENST00000493610 CCDC93Q567U6 631 aa17.57■□□□□ 0.4
PDCD11-206ENST00000493610 DIEXFQ68CQ4 756 aaKnown RBP17.57■□□□□ 0.4
PDCD11-206ENST00000493610 TRMT2AQ8IZ69 625 aaKnown RBP17.57■□□□□ 0.4
PDCD11-206ENST00000493610 CDCA7LQ96GN5 454 aa17.57■□□□□ 0.4
PDCD11-206ENST00000493610 NMRK2Q9NPI5 230 aa17.57■□□□□ 0.4
PDCD11-206ENST00000493610 LRRC37AA6NMS7 1700 aa17.56■□□□□ 0.4
PDCD11-206ENST00000493610 FLIIQ13045 1269 aa17.56■□□□□ 0.4
PDCD11-206ENST00000493610 RTL5Q5HYW3 569 aaPredicted RBP17.56■□□□□ 0.4
PDCD11-206ENST00000493610 JARID2Q92833 1246 aaPredicted RBP17.56■□□□□ 0.4
PDCD11-206ENST00000493610 RPGRQ92834 1020 aaKnown RBP17.56■□□□□ 0.4
PDCD11-206ENST00000493610 TAOK3Q9H2K8 898 aa17.56■□□□□ 0.4
PDCD11-206ENST00000493610 MYH16Q9H6N6 1097 aa17.56■□□□□ 0.4
PDCD11-206ENST00000493610 GPBP1L1Q9HC44 474 aaPredicted RBP17.56■□□□□ 0.4
PDCD11-206ENST00000493610 SF3B3Q15393 1217 aaKnown RBP17.55■□□□□ 0.4
PDCD11-206ENST00000493610 ZBTB38Q8NAP3 1195 aaPredicted RBP17.55■□□□□ 0.4
PDCD11-206ENST00000493610 CCDC191Q8NCU4 936 aa17.55■□□□□ 0.4
PDCD11-206ENST00000493610 RBM17Q96I25 401 aaKnown RBP17.55■□□□□ 0.4
PDCD11-206ENST00000493610 STK31Q9BXU1 1019 aa17.55■□□□□ 0.4
PDCD11-206ENST00000493610 CHMP4AQ9BY43 222 aa17.55■□□□□ 0.4
PDCD11-206ENST00000493610 DUOX1Q9NRD9 1551 aa17.54■□□□□ 0.4
PDCD11-206ENST00000493610 ZC3H4Q9UPT8 1303 aaKnown RBP17.54■□□□□ 0.4
PDCD11-206ENST00000493610 PCCAP05165 728 aaPredicted RBP17.54■□□□□ 0.4
PDCD11-206ENST00000493610 FKBP4Q02790 459 aaKnown RBP eCLIP17.54■□□□□ 0.4
PDCD11-206ENST00000493610 CWF19L2Q2TBE0 894 aaKnown RBP17.54■□□□□ 0.4
PDCD11-206ENST00000493610 SOGA3Q5TF21 947 aa17.54■□□□□ 0.4
PDCD11-206ENST00000493610 NEURL1BA8MQ27 555 aa17.53■□□□□ 0.4
PDCD11-206ENST00000493610 POTECB2RU33 542 aa17.53■□□□□ 0.4
PDCD11-206ENST00000493610 IRS4O14654 1257 aaPredicted RBP17.53■□□□□ 0.4
PDCD11-206ENST00000493610 PPEF1O14829 653 aaPredicted RBP17.53■□□□□ 0.4
PDCD11-206ENST00000493610 DDX58O95786 925 aaKnown RBP17.53■□□□□ 0.4
PDCD11-206ENST00000493610 C1QTNF8P60827 252 aa17.53■□□□□ 0.4
PDCD11-206ENST00000493610 ZNF277Q9NRM2 450 aaPredicted RBP17.53■□□□□ 0.4
PDCD11-206ENST00000493610 LTBP1Q14766 1721 aa17.52■□□□□ 0.4
PDCD11-206ENST00000493610 CASP7P55210 303 aa17.52■□□□□ 0.4
PDCD11-206ENST00000493610 PSMD1Q99460 953 aa17.52■□□□□ 0.4
PDCD11-206ENST00000493610 CWC25Q9NXE8 425 aaPredicted RBP17.52■□□□□ 0.4
PDCD11-206ENST00000493610 ATP6V0A2Q9Y487 856 aa17.52■□□□□ 0.4
PDCD11-206ENST00000493610 WDR90Q96KV7 1748 aa17.52■□□□□ 0.39
PDCD11-206ENST00000493610 GLTPD2A6NH11 291 aa17.51■□□□□ 0.39
PDCD11-206ENST00000493610 E9PSI1 815 aa17.51■□□□□ 0.39
PDCD11-206ENST00000493610 GRAPQ13588 217 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms