RNA–Protein interactions for RNA: ENST00000491584.1

PTPN7-214, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-214ENST00000491584 TBC1D9BQ66K14 1250 aa15.2■□□□□ 0.02
PTPN7-214ENST00000491584 LRP10Q7Z4F1 713 aa15.2■□□□□ 0.02
PTPN7-214ENST00000491584 SMC4Q9NTJ3 1288 aa15.2■□□□□ 0.02
PTPN7-214ENST00000491584 CARMIL3Q8ND23 1372 aa15.2■□□□□ 0.02
PTPN7-214ENST00000491584 APLP1P51693 650 aa15.19■□□□□ 0.02
PTPN7-214ENST00000491584 HLFQ16534 295 aa15.19■□□□□ 0.02
PTPN7-214ENST00000491584 PI4KAP2A4QPH2 592 aa15.18■□□□□ 0.02
PTPN7-214ENST00000491584 TRIM28Q13263 835 aaKnown RBP15.18■□□□□ 0.02
PTPN7-214ENST00000491584 ZNF34Q8IZ26 560 aa15.18■□□□□ 0.02
PTPN7-214ENST00000491584 PI4KAP1Q8N8J0 262 aa15.18■□□□□ 0.02
PTPN7-214ENST00000491584 CNBD1Q8NA66 436 aa15.18■□□□□ 0.02
PTPN7-214ENST00000491584 RBM46Q8TBY0 533 aaKnown RBP15.18■□□□□ 0.02
PTPN7-214ENST00000491584 SSH1Q8WYL5 1049 aa15.18■□□□□ 0.02
PTPN7-214ENST00000491584 UTP14AQ9BVJ6 771 aaKnown RBP15.18■□□□□ 0.02
PTPN7-214ENST00000491584 ANKRD31Q8N7Z5 1873 aa15.18■□□□□ 0.02
PTPN7-214ENST00000491584 PTPRCP08575 1304 aa15.17■□□□□ 0.02
PTPN7-214ENST00000491584 PDE6BP35913 854 aa15.17■□□□□ 0.02
PTPN7-214ENST00000491584 MRPL50Q8N5N7 158 aaKnown RBP15.17■□□□□ 0.02
PTPN7-214ENST00000491584 METTL22Q9BUU2 404 aaPredicted RBP15.17■□□□□ 0.02
PTPN7-214ENST00000491584 MAP3K2Q9Y2U5 619 aa15.17■□□□□ 0.02
PTPN7-214ENST00000491584 COL11A2P13942 1736 aaPredicted RBP15.17■□□□□ 0.02
PTPN7-214ENST00000491584 RNF123Q5XPI4 1314 aa15.17■□□□□ 0.02
PTPN7-214ENST00000491584 GPTP24298 496 aa15.16■□□□□ 0.02
PTPN7-214ENST00000491584 RARSP54136 660 aaKnown RBP15.16■□□□□ 0.02
PTPN7-214ENST00000491584 BRPF1P55201 1214 aaPredicted RBP15.16■□□□□ 0.02
PTPN7-214ENST00000491584 CCDC191Q8NCU4 936 aa15.16■□□□□ 0.02
PTPN7-214ENST00000491584 DNAAF4Q8WXU2 420 aa15.16■□□□□ 0.02
PTPN7-214ENST00000491584 BRIP1Q9BX63 1249 aa15.16■□□□□ 0.02
PTPN7-214ENST00000491584 API5Q9BZZ5 524 aaKnown RBP15.16■□□□□ 0.02
PTPN7-214ENST00000491584 RNF181Q9P0P0 153 aa15.16■□□□□ 0.02
PTPN7-214ENST00000491584 TRMT112Q9UI30 125 aaKnown RBP15.16■□□□□ 0.02
PTPN7-214ENST00000491584 LAMB4A4D0S4 1761 aa15.16■□□□□ 0.02
PTPN7-214ENST00000491584 TIAM2Q8IVF5 1701 aa15.15■□□□□ 0.02
PTPN7-214ENST00000491584 FAM177BA6PVY3 158 aa15.15■□□□□ 0.02
PTPN7-214ENST00000491584 RASSF7Q02833 373 aa15.15■□□□□ 0.02
PTPN7-214ENST00000491584 G2E3Q7L622 706 aa15.15■□□□□ 0.02
PTPN7-214ENST00000491584 ARHGAP45Q92619 1136 aa15.15■□□□□ 0.02
PTPN7-214ENST00000491584 KIF16BQ96L93 1317 aa15.15■□□□□ 0.02
PTPN7-214ENST00000491584 H0YIN7 160 aa15.14■□□□□ 0.01
PTPN7-214ENST00000491584 NLRP10Q86W26 655 aa15.14■□□□□ 0.01
PTPN7-214ENST00000491584 LINS1Q8NG48 757 aa15.14■□□□□ 0.01
PTPN7-214ENST00000491584 MYD88Q99836 296 aa15.14■□□□□ 0.01
PTPN7-214ENST00000491584 CWC25Q9NXE8 425 aaPredicted RBP15.14■□□□□ 0.01
PTPN7-214ENST00000491584 HDAC5Q9UQL6 1122 aa15.14■□□□□ 0.01
PTPN7-214ENST00000491584 ZC3H4Q9UPT8 1303 aaKnown RBP15.14■□□□□ 0.01
PTPN7-214ENST00000491584 BCORQ6W2J9 1755 aa15.13■□□□□ 0.01
PTPN7-214ENST00000491584 ATP5J2-PTCD1G3V325 749 aa15.13■□□□□ 0.01
PTPN7-214ENST00000491584 MS4A1P11836 297 aa15.13■□□□□ 0.01
PTPN7-214ENST00000491584 SUSD4Q5VX71 490 aa15.13■□□□□ 0.01
PTPN7-214ENST00000491584 SLC4A10Q6U841 1118 aa15.13■□□□□ 0.01
PTPN7-214ENST00000491584 ISCA1Q9BUE6 129 aa15.13■□□□□ 0.01
PTPN7-214ENST00000491584 SH3TC1Q8TE82 1336 aa15.13■□□□□ 0.01
PTPN7-214ENST00000491584 NFKBIEO00221 500 aa15.12■□□□□ 0.01
PTPN7-214ENST00000491584 HTRA3P83110 453 aa15.12■□□□□ 0.01
PTPN7-214ENST00000491584 FSTL1Q12841 308 aa15.12■□□□□ 0.01
PTPN7-214ENST00000491584 PRR5LQ6MZQ0 368 aa15.12■□□□□ 0.01
PTPN7-214ENST00000491584 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.12■□□□□ 0.01
PTPN7-214ENST00000491584 NLRP3Q96P20 1036 aa15.12■□□□□ 0.01
PTPN7-214ENST00000491584 BCL2L13Q9BXK5 485 aa15.12■□□□□ 0.01
PTPN7-214ENST00000491584 NOB1Q9ULX3 412 aaKnown RBP15.12■□□□□ 0.01
PTPN7-214ENST00000491584 KDM2BQ8NHM5 1336 aa15.12■□□□□ 0.01
PTPN7-214ENST00000491584 ALDH1L1O75891 902 aa15.11■□□□□ 0.01
PTPN7-214ENST00000491584 FRAT1Q92837 279 aaPredicted RBP15.11■□□□□ 0.01
PTPN7-214ENST00000491584 SRCIN1Q9C0H9 1055 aa15.11■□□□□ 0.01
PTPN7-214ENST00000491584 RRAGCQ9HB90 399 aa15.11■□□□□ 0.01
PTPN7-214ENST00000491584 IBTKQ9P2D0 1353 aaPredicted RBP15.11■□□□□ 0.01
PTPN7-214ENST00000491584 FER1L6Q2WGJ9 1857 aa15.1■□□□□ 0.01
PTPN7-214ENST00000491584 CCT4P50991 539 aaKnown RBP15.1■□□□□ 0.01
PTPN7-214ENST00000491584 SLC10A5Q5PT55 438 aa15.1■□□□□ 0.01
PTPN7-214ENST00000491584 ZKSCAN2Q63HK3 967 aa15.1■□□□□ 0.01
PTPN7-214ENST00000491584 JMYQ8N9B5 988 aa15.1■□□□□ 0.01
PTPN7-214ENST00000491584 ZBTB38Q8NAP3 1195 aaPredicted RBP15.1■□□□□ 0.01
PTPN7-214ENST00000491584 TMX4Q9H1E5 349 aaPredicted RBP15.1■□□□□ 0.01
PTPN7-214ENST00000491584 RCAN3Q9UKA8 241 aa15.1■□□□□ 0.01
PTPN7-214ENST00000491584 PCCAP05165 728 aaPredicted RBP15.09■□□□□ 0.01
PTPN7-214ENST00000491584 LMNB1P20700 586 aa15.09■□□□□ 0.01
PTPN7-214ENST00000491584 C2CD5Q86YS7 1000 aa15.09■□□□□ 0.01
PTPN7-214ENST00000491584 TTLL6Q8N841 843 aa15.09■□□□□ 0.01
PTPN7-214ENST00000491584 KLRG1Q96E93 195 aa15.09■□□□□ 0.01
PTPN7-214ENST00000491584 C9orf78Q9NZ63 289 aaPredicted RBP15.09■□□□□ 0.01
PTPN7-214ENST00000491584 ARFGEF2Q9Y6D5 1785 aa15.08■□□□□ 0.01
PTPN7-214ENST00000491584 CCDC88AQ3V6T2 1871 aa15.08■□□□□ 0.01
PTPN7-214ENST00000491584 GLTPD2A6NH11 291 aa15.08■□□□□ 0
PTPN7-214ENST00000491584 NEURL1BA8MQ27 555 aa15.08■□□□□ 0
PTPN7-214ENST00000491584 POTECB2RU33 542 aa15.08■□□□□ 0
PTPN7-214ENST00000491584 F6X3S4 739 aa15.08■□□□□ 0
PTPN7-214ENST00000491584 NTSR2O95665 410 aa15.08■□□□□ 0
PTPN7-214ENST00000491584 ALDH1B1P30837 517 aa15.08■□□□□ 0
PTPN7-214ENST00000491584 ERFEQ4G0M1 354 aa15.08■□□□□ 0
PTPN7-214ENST00000491584 NUTM1Q86Y26 1132 aa15.08■□□□□ 0
PTPN7-214ENST00000491584 RPGRQ92834 1020 aaKnown RBP15.08■□□□□ 0
PTPN7-214ENST00000491584 CNKSR1Q969H4 720 aa15.08■□□□□ 0
PTPN7-214ENST00000491584 UBN2Q6ZU65 1347 aa15.08■□□□□ 0
PTPN7-214ENST00000491584 BCAR3O75815 825 aa15.07■□□□□ 0
PTPN7-214ENST00000491584 NPR1P16066 1061 aa15.07■□□□□ 0
PTPN7-214ENST00000491584 GCKRQ14397 625 aa15.07■□□□□ 0
PTPN7-214ENST00000491584 BEND3Q5T5X7 828 aa15.07■□□□□ 0
PTPN7-214ENST00000491584 ATF7IPQ6VMQ6 1270 aa15.07■□□□□ 0
PTPN7-214ENST00000491584 ZNF622Q969S3 477 aaKnown RBP eCLIP15.07■□□□□ 01e-6■□□□□ 8.9
PTPN7-214ENST00000491584 FAM89AQ96GI7 184 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms