RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 KDM3BQ7LBC6 1761 aa10.83□□□□□ -0.68
APP-216ENST00000491395 IARSP41252 1262 aaKnown RBP10.83□□□□□ -0.68
APP-216ENST00000491395 SLC10A5Q5PT55 438 aa10.83□□□□□ -0.68
APP-216ENST00000491395 RBM17Q96I25 401 aaKnown RBP10.83□□□□□ -0.68
APP-216ENST00000491395 DLG5Q8TDM6 1919 aa10.82□□□□□ -0.68
APP-216ENST00000491395 IBTKQ9P2D0 1353 aaPredicted RBP10.82□□□□□ -0.68
APP-216ENST00000491395 CC2D2BQ6DHV5 1058 aa10.82□□□□□ -0.68
APP-216ENST00000491395 CHADLQ6NUI6 762 aa10.82□□□□□ -0.68
APP-216ENST00000491395 NLRP10Q86W26 655 aa10.82□□□□□ -0.68
APP-216ENST00000491395 ZNF428Q96B54 188 aa10.82□□□□□ -0.68
APP-216ENST00000491395 L3MBTL3Q96JM7 780 aaPredicted RBP10.82□□□□□ -0.68
APP-216ENST00000491395 NLRP3Q96P20 1036 aa10.82□□□□□ -0.68
APP-216ENST00000491395 CRAMP1Q96RY5 1269 aa10.82□□□□□ -0.68
APP-216ENST00000491395 PSMD1Q99460 953 aa10.82□□□□□ -0.68
APP-216ENST00000491395 DDX21Q9NR30 783 aaKnown RBP eCLIP10.82□□□□□ -0.68
APP-216ENST00000491395 CHPF2Q9P2E5 772 aa10.82□□□□□ -0.68
APP-216ENST00000491395 FZD9O00144 591 aa10.81□□□□□ -0.68
APP-216ENST00000491395 APAF1O14727 1248 aa10.81□□□□□ -0.68
APP-216ENST00000491395 PPEF1O14829 653 aaPredicted RBP10.81□□□□□ -0.68
APP-216ENST00000491395 HCLS1P14317 486 aaPredicted RBP10.81□□□□□ -0.68
APP-216ENST00000491395 TCIRG1Q13488 830 aa10.81□□□□□ -0.68
APP-216ENST00000491395 HSP90AB3PQ58FF7 597 aa10.81□□□□□ -0.68
APP-216ENST00000491395 IFFO2Q5TF58 517 aa10.81□□□□□ -0.68
APP-216ENST00000491395 HDGFL1Q5TGJ6 251 aa10.81□□□□□ -0.68
APP-216ENST00000491395 JMYQ8N9B5 988 aa10.81□□□□□ -0.68
APP-216ENST00000491395 TAF1DQ9H5J8 278 aaPredicted RBP10.81□□□□□ -0.68
APP-216ENST00000491395 RIC1Q4ADV7 1423 aa10.81□□□□□ -0.68
APP-216ENST00000491395 FER1L6Q2WGJ9 1857 aa10.81□□□□□ -0.68
APP-216ENST00000491395 LAMB4A4D0S4 1761 aa10.8□□□□□ -0.68
APP-216ENST00000491395 TNRC6CQ9HCJ0 1690 aaKnown RBP10.8□□□□□ -0.68
APP-216ENST00000491395 IQCA1LA6NCM1 817 aa10.8□□□□□ -0.68
APP-216ENST00000491395 DUSP27Q5VZP5 1158 aa10.8□□□□□ -0.68
APP-216ENST00000491395 JDP2Q8WYK2 163 aa10.8□□□□□ -0.68
APP-216ENST00000491395 CFAP44Q96MT7 982 aa10.8□□□□□ -0.68
APP-216ENST00000491395 MBIPQ9NS73 344 aa10.8□□□□□ -0.68
APP-216ENST00000491395 TRMT112Q9UI30 125 aaKnown RBP10.8□□□□□ -0.68
APP-216ENST00000491395 SNED1Q8TER0 1413 aa10.8□□□□□ -0.68
APP-216ENST00000491395 ZNF853P0CG23 659 aa10.79□□□□□ -0.68
APP-216ENST00000491395 EAPPQ56P03 285 aaPredicted RBP10.79□□□□□ -0.68
APP-216ENST00000491395 LARGE2Q8N3Y3 721 aa10.79□□□□□ -0.68
APP-216ENST00000491395 HACL1Q9UJ83 578 aa10.79□□□□□ -0.68
APP-216ENST00000491395 ATP6V0A2Q9Y487 856 aa10.79□□□□□ -0.68
APP-216ENST00000491395 GJA3Q9Y6H8 435 aa10.79□□□□□ -0.68
APP-216ENST00000491395 TIAM2Q8IVF5 1701 aa10.78□□□□□ -0.68
APP-216ENST00000491395 WDR90Q96KV7 1748 aa10.78□□□□□ -0.68
APP-216ENST00000491395 ELL2O00472 640 aaPredicted RBP10.78□□□□□ -0.68
APP-216ENST00000491395 HOXB7P09629 217 aa10.78□□□□□ -0.68
APP-216ENST00000491395 EPHX2P34913 555 aa10.78□□□□□ -0.68
APP-216ENST00000491395 GRIPAP1Q4V328 841 aa10.78□□□□□ -0.68
APP-216ENST00000491395 ANKRD13DQ6ZTN6 518 aa10.78□□□□□ -0.68
APP-216ENST00000491395 LDHDQ86WU2 507 aa10.78□□□□□ -0.68
APP-216ENST00000491395 GPC2Q8N158 579 aa10.78□□□□□ -0.68
APP-216ENST00000491395 PLBD2Q8NHP8 589 aa10.78□□□□□ -0.68
APP-216ENST00000491395 DBF4Q9UBU7 674 aaPredicted RBP10.78□□□□□ -0.68
APP-216ENST00000491395 CLEC11AQ9Y240 323 aa10.78□□□□□ -0.68
APP-216ENST00000491395 ABCC4O15439 1325 aa10.78□□□□□ -0.68
APP-216ENST00000491395 RNF123Q5XPI4 1314 aa10.78□□□□□ -0.68
APP-216ENST00000491395 SH3TC1Q8TE82 1336 aa10.78□□□□□ -0.68
APP-216ENST00000491395 CCDC88AQ3V6T2 1871 aa10.77□□□□□ -0.69
APP-216ENST00000491395 ATP5J2-PTCD1G3V325 749 aa10.77□□□□□ -0.69
APP-216ENST00000491395 BBOX1O75936 387 aa10.77□□□□□ -0.69
APP-216ENST00000491395 EIF6P56537 245 aaKnown RBP10.77□□□□□ -0.69
APP-216ENST00000491395 CCDC184Q52MB2 194 aa10.77□□□□□ -0.69
APP-216ENST00000491395 ISCA1Q9BUE6 129 aa10.77□□□□□ -0.69
APP-216ENST00000491395 TMX4Q9H1E5 349 aaPredicted RBP10.77□□□□□ -0.69
APP-216ENST00000491395 HYPKQ9NX55 129 aa10.77□□□□□ -0.69
APP-216ENST00000491395 NUP98P52948 1817 aa10.77□□□□□ -0.69
APP-216ENST00000491395 PPIP5K2O43314 1243 aa10.76□□□□□ -0.69
APP-216ENST00000491395 ITGBL1O95965 494 aaPredicted RBP10.76□□□□□ -0.69
APP-216ENST00000491395 GNAI1P63096 354 aa10.76□□□□□ -0.69
APP-216ENST00000491395 AOC3Q16853 763 aa10.76□□□□□ -0.69
APP-216ENST00000491395 RTL5Q5HYW3 569 aaPredicted RBP10.76□□□□□ -0.69
APP-216ENST00000491395 MAP1SQ66K74 1059 aaPredicted RBP10.76□□□□□ -0.69
APP-216ENST00000491395 DDX46Q7L014 1031 aaKnown RBP10.76□□□□□ -0.69
APP-216ENST00000491395 PNMA8AQ86V59 439 aaPredicted RBP10.76□□□□□ -0.69
APP-216ENST00000491395 SP8Q8IXZ3 490 aa10.76□□□□□ -0.69
APP-216ENST00000491395 FAM89AQ96GI7 184 aa10.76□□□□□ -0.69
APP-216ENST00000491395 CREBZFQ9NS37 354 aa10.76□□□□□ -0.69
APP-216ENST00000491395 IFT57Q9NWB7 429 aa10.76□□□□□ -0.69
APP-216ENST00000491395 MKRN1Q9UHC7 482 aaKnown RBP10.76□□□□□ -0.69
APP-216ENST00000491395 PASKQ96RG2 1323 aa10.76□□□□□ -0.69
APP-216ENST00000491395 COL4A5P29400 1685 aa10.76□□□□□ -0.69
APP-216ENST00000491395 ARFGEF2Q9Y6D5 1785 aa10.75□□□□□ -0.69
APP-216ENST00000491395 EPS15P42566 896 aa10.75□□□□□ -0.69
APP-216ENST00000491395 CALD1Q05682 793 aaKnown RBP10.75□□□□□ -0.69
APP-216ENST00000491395 GRAPQ13588 217 aa10.75□□□□□ -0.69
APP-216ENST00000491395 DPP8Q6V1X1 898 aaPredicted RBP10.75□□□□□ -0.69
APP-216ENST00000491395 NIM1KQ8IY84 436 aa10.75□□□□□ -0.69
APP-216ENST00000491395 C8orf58Q8NAV2 365 aa10.75□□□□□ -0.69
APP-216ENST00000491395 GRAPLQ8TC17 118 aaPredicted RBP10.75□□□□□ -0.69
APP-216ENST00000491395 PHAXQ9H814 394 aaKnown RBP10.75□□□□□ -0.69
APP-216ENST00000491395 CACNA1SQ13698 1873 aa10.74□□□□□ -0.69
APP-216ENST00000491395 DICER1Q9UPY3 1922 aaKnown RBP10.74□□□□□ -0.69
APP-216ENST00000491395 SCNN1DP51172 638 aa10.74□□□□□ -0.69
APP-216ENST00000491395 TRIM28Q13263 835 aaKnown RBP10.74□□□□□ -0.69
APP-216ENST00000491395 COL13A1Q5TAT6 717 aaPredicted RBP10.74□□□□□ -0.69
APP-216ENST00000491395 RIC3Q7Z5B4 369 aa10.74□□□□□ -0.69
APP-216ENST00000491395 CNTROBQ8N137 903 aa10.74□□□□□ -0.69
APP-216ENST00000491395 MPNDQ8N594 471 aa10.74□□□□□ -0.69
APP-216ENST00000491395 RTFDC1Q9BY42 306 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms