RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 KLRG1Q96E93 195 aa12.48□□□□□ -0.41
CCT3-213ENST00000489870 TMX4Q9H1E5 349 aaPredicted RBP12.48□□□□□ -0.41
CCT3-213ENST00000489870 SCN4AP35499 1836 aa12.47□□□□□ -0.41
CCT3-213ENST00000489870 POTECB2RU33 542 aa12.47□□□□□ -0.41
CCT3-213ENST00000489870 CALD1Q05682 793 aaKnown RBP12.47□□□□□ -0.41
CCT3-213ENST00000489870 DDX10Q13206 875 aaKnown RBP12.47□□□□□ -0.41
CCT3-213ENST00000489870 WDR43Q15061 677 aaKnown RBP eCLIP12.47□□□□□ -0.41
CCT3-213ENST00000489870 IFFO2Q5TF58 517 aa12.47□□□□□ -0.41
CCT3-213ENST00000489870 NLRP3Q96P20 1036 aa12.47□□□□□ -0.41
CCT3-213ENST00000489870 DDX21Q9NR30 783 aaKnown RBP eCLIP12.47□□□□□ -0.41
CCT3-213ENST00000489870 COL11A2P13942 1736 aaPredicted RBP12.46□□□□□ -0.41
CCT3-213ENST00000489870 PIP4K2AP48426 406 aaPredicted RBP12.46□□□□□ -0.41
CCT3-213ENST00000489870 PDIA6Q15084 440 aa12.46□□□□□ -0.41
CCT3-213ENST00000489870 TMC4Q7Z404 712 aa12.46□□□□□ -0.41
CCT3-213ENST00000489870 LRP10Q7Z4F1 713 aa12.46□□□□□ -0.41
CCT3-213ENST00000489870 PNMA8AQ86V59 439 aaPredicted RBP12.46□□□□□ -0.41
CCT3-213ENST00000489870 JDP2Q8WYK2 163 aa12.46□□□□□ -0.41
CCT3-213ENST00000489870 RPGRQ92834 1020 aaKnown RBP12.46□□□□□ -0.41
CCT3-213ENST00000489870 RBM17Q96I25 401 aaKnown RBP12.46□□□□□ -0.41
CCT3-213ENST00000489870 FZD9O00144 591 aa12.45□□□□□ -0.42
CCT3-213ENST00000489870 BBOX1O75936 387 aa12.45□□□□□ -0.42
CCT3-213ENST00000489870 HSP90B1P14625 803 aaKnown RBP12.45□□□□□ -0.42
CCT3-213ENST00000489870 MYL6BP14649 208 aa12.45□□□□□ -0.42
CCT3-213ENST00000489870 CHADLQ6NUI6 762 aa12.45□□□□□ -0.42
CCT3-213ENST00000489870 TTLL7Q6ZT98 887 aa12.45□□□□□ -0.42
CCT3-213ENST00000489870 CCDC24Q8N4L8 307 aa12.45□□□□□ -0.42
CCT3-213ENST00000489870 CFAP44Q96MT7 982 aa12.45□□□□□ -0.42
CCT3-213ENST00000489870 UTP14AQ9BVJ6 771 aaKnown RBP12.45□□□□□ -0.42
CCT3-213ENST00000489870 TRIM28Q13263 835 aaKnown RBP12.44□□□□□ -0.42
CCT3-213ENST00000489870 TCIRG1Q13488 830 aa12.44□□□□□ -0.42
CCT3-213ENST00000489870 SUSD4Q5VX71 490 aa12.44□□□□□ -0.42
CCT3-213ENST00000489870 POTEHQ6S545 545 aa12.44□□□□□ -0.42
CCT3-213ENST00000489870 LDHDQ86WU2 507 aa12.44□□□□□ -0.42
CCT3-213ENST00000489870 GPC2Q8N158 579 aa12.44□□□□□ -0.42
CCT3-213ENST00000489870 PRKRIP1Q9H875 184 aaPredicted RBP12.44□□□□□ -0.42
CCT3-213ENST00000489870 DBF4Q9UBU7 674 aaPredicted RBP12.44□□□□□ -0.42
CCT3-213ENST00000489870 TIAM2Q8IVF5 1701 aa12.44□□□□□ -0.42
CCT3-213ENST00000489870 NTSR2O95665 410 aa12.43□□□□□ -0.42
CCT3-213ENST00000489870 IARSP41252 1262 aaKnown RBP12.43□□□□□ -0.42
CCT3-213ENST00000489870 SYNE4Q8N205 404 aa12.43□□□□□ -0.42
CCT3-213ENST00000489870 NGEFQ8N5V2 710 aa12.43□□□□□ -0.42
CCT3-213ENST00000489870 SUPT20HQ8NEM7 779 aa12.43□□□□□ -0.42
CCT3-213ENST00000489870 THUMPD2Q9BTF0 503 aaKnown RBP12.43□□□□□ -0.42
CCT3-213ENST00000489870 HYPKQ9NX55 129 aa12.43□□□□□ -0.42
CCT3-213ENST00000489870 ADAMTS8Q9UP79 889 aa12.43□□□□□ -0.42
CCT3-213ENST00000489870 DDNO94850 711 aaPredicted RBP12.42□□□□□ -0.42
CCT3-213ENST00000489870 EIF2S2P20042 333 aaKnown RBP12.42□□□□□ -0.42
CCT3-213ENST00000489870 COPS6Q7L5N1 327 aa12.42□□□□□ -0.42
CCT3-213ENST00000489870 PLBD2Q8NHP8 589 aa12.42□□□□□ -0.42
CCT3-213ENST00000489870 ZBTB3Q9H5J0 574 aa12.42□□□□□ -0.42
CCT3-213ENST00000489870 CREBZFQ9NS37 354 aa12.42□□□□□ -0.42
CCT3-213ENST00000489870 HACL1Q9UJ83 578 aa12.42□□□□□ -0.42
CCT3-213ENST00000489870 TRIM35Q9UPQ4 493 aa12.42□□□□□ -0.42
CCT3-213ENST00000489870 UBN2Q6ZU65 1347 aa12.41□□□□□ -0.42
CCT3-213ENST00000489870 EIF6P56537 245 aaKnown RBP12.41□□□□□ -0.42
CCT3-213ENST00000489870 GNAI1P63096 354 aa12.41□□□□□ -0.42
CCT3-213ENST00000489870 ANKRD13DQ6ZTN6 518 aa12.41□□□□□ -0.42
CCT3-213ENST00000489870 SP8Q8IXZ3 490 aa12.41□□□□□ -0.42
CCT3-213ENST00000489870 RTFDC1Q9BY42 306 aaPredicted RBP12.41□□□□□ -0.42
CCT3-213ENST00000489870 TAF1DQ9H5J8 278 aaPredicted RBP12.41□□□□□ -0.42
CCT3-213ENST00000489870 ATP6V0A2Q9Y487 856 aa12.41□□□□□ -0.42
CCT3-213ENST00000489870 CACNA1SQ13698 1873 aa12.4□□□□□ -0.42
CCT3-213ENST00000489870 SNED1Q8TER0 1413 aa12.4□□□□□ -0.42
CCT3-213ENST00000489870 FAM177BA6PVY3 158 aa12.4□□□□□ -0.42
CCT3-213ENST00000489870 ZNF853P0CG23 659 aa12.4□□□□□ -0.42
CCT3-213ENST00000489870 GPTP24298 496 aa12.4□□□□□ -0.42
CCT3-213ENST00000489870 NLRP10Q86W26 655 aa12.4□□□□□ -0.42
CCT3-213ENST00000489870 NUTM1Q86Y26 1132 aa12.4□□□□□ -0.42
CCT3-213ENST00000489870 SH3TC1Q8TE82 1336 aa12.39□□□□□ -0.43
CCT3-213ENST00000489870 ZEB1P37275 1124 aaPredicted RBP12.39□□□□□ -0.43
CCT3-213ENST00000489870 ZNF277Q9NRM2 450 aaPredicted RBP12.39□□□□□ -0.43
CCT3-213ENST00000489870 IFT57Q9NWB7 429 aa12.39□□□□□ -0.43
CCT3-213ENST00000489870 PCNTO95613 3336 aa12.38□□□□□ -0.43
CCT3-213ENST00000489870 PPEF1O14829 653 aaPredicted RBP12.38□□□□□ -0.43
CCT3-213ENST00000489870 ABCB7O75027 752 aa12.38□□□□□ -0.43
CCT3-213ENST00000489870 SF3B3Q15393 1217 aaKnown RBP12.38□□□□□ -0.43
CCT3-213ENST00000489870 NEUROD2Q15784 382 aa12.38□□□□□ -0.43
CCT3-213ENST00000489870 HDGFL1Q5TGJ6 251 aa12.38□□□□□ -0.43
CCT3-213ENST00000489870 DDX46Q7L014 1031 aaKnown RBP12.38□□□□□ -0.43
CCT3-213ENST00000489870 XAGE3Q8WTP9 111 aa12.38□□□□□ -0.43
CCT3-213ENST00000489870 TRMT112Q9UI30 125 aaKnown RBP12.38□□□□□ -0.43
CCT3-213ENST00000489870 ANKRD36CQ5JPF3 1778 aa12.38□□□□□ -0.43
CCT3-213ENST00000489870 PASKQ96RG2 1323 aa12.37□□□□□ -0.43
CCT3-213ENST00000489870 CDHR2Q9BYE9 1310 aa12.37□□□□□ -0.43
CCT3-213ENST00000489870 ITGBL1O95965 494 aaPredicted RBP12.37□□□□□ -0.43
CCT3-213ENST00000489870 LMOD1P29536 600 aaPredicted RBP12.37□□□□□ -0.43
CCT3-213ENST00000489870 EPHX2P34913 555 aa12.37□□□□□ -0.43
CCT3-213ENST00000489870 CCDC27Q2M243 656 aa12.37□□□□□ -0.43
CCT3-213ENST00000489870 USP50Q70EL3 339 aaPredicted RBP12.37□□□□□ -0.43
CCT3-213ENST00000489870 LARGE2Q8N3Y3 721 aa12.37□□□□□ -0.43
CCT3-213ENST00000489870 ISCA1Q9BUE6 129 aa12.37□□□□□ -0.43
CCT3-213ENST00000489870 ABCC12Q96J65 1359 aa12.37□□□□□ -0.43
CCT3-213ENST00000489870 PROSER3Q2NL68 480 aa12.36□□□□□ -0.43
CCT3-213ENST00000489870 DUSP27Q5VZP5 1158 aa12.36□□□□□ -0.43
CCT3-213ENST00000489870 MPNDQ8N594 471 aa12.36□□□□□ -0.43
CCT3-213ENST00000489870 ZNRF3Q9ULT6 936 aa12.36□□□□□ -0.43
CCT3-213ENST00000489870 TMEM88BA6NKF7 163 aa12.35□□□□□ -0.43
CCT3-213ENST00000489870 AIMP1Q12904 312 aaKnown RBP12.35□□□□□ -0.43
CCT3-213ENST00000489870 GRAPQ13588 217 aa12.35□□□□□ -0.43
CCT3-213ENST00000489870 TNIP1Q15025 636 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms