RNA–Protein interactions for RNA: ENST00000489559.1

ACAA1-218, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 4

Gene ACAA1, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-218ENST00000489559 ZNF219Q9P2Y4 722 aaPredicted RBP28.8■■■□□ 2.2
ACAA1-218ENST00000489559 RNF123Q5XPI4 1314 aa28.79■■■□□ 2.2
ACAA1-218ENST00000489559 FANCIQ9NVI1 1328 aa28.79■■■□□ 2.2
ACAA1-218ENST00000489559 CRY2Q49AN0 593 aa28.79■■■□□ 2.2
ACAA1-218ENST00000489559 RNF181Q9P0P0 153 aa28.79■■■□□ 2.2
ACAA1-218ENST00000489559 TWISTNBQ3B726 338 aaPredicted RBP28.78■■■□□ 2.2
ACAA1-218ENST00000489559 PHAXQ9H814 394 aaKnown RBP28.78■■■□□ 2.2
ACAA1-218ENST00000489559 GPBP1L1Q9HC44 474 aaPredicted RBP28.78■■■□□ 2.2
ACAA1-218ENST00000489559 NFKBIEO00221 500 aa28.77■■■□□ 2.2
ACAA1-218ENST00000489559 GOLGA2Q08379 1002 aa28.77■■■□□ 2.2
ACAA1-218ENST00000489559 SOGA3Q5TF21 947 aa28.77■■■□□ 2.2
ACAA1-218ENST00000489559 ZNF526Q8TF50 670 aaPredicted RBP28.77■■■□□ 2.2
ACAA1-218ENST00000489559 ALDH1B1P30837 517 aa28.76■■■□□ 2.19
ACAA1-218ENST00000489559 LAMB2P55268 1798 aa28.75■■■□□ 2.19
ACAA1-218ENST00000489559 LMNB1P20700 586 aa28.75■■■□□ 2.19
ACAA1-218ENST00000489559 SLC10A5Q5PT55 438 aa28.75■■■□□ 2.19
ACAA1-218ENST00000489559 ISCA1Q9BUE6 129 aa28.75■■■□□ 2.19
ACAA1-218ENST00000489559 CCER2I3L3R5 266 aa28.74■■■□□ 2.19
ACAA1-218ENST00000489559 RIC3Q7Z5B4 369 aa28.74■■■□□ 2.19
ACAA1-218ENST00000489559 RPGRQ92834 1020 aaKnown RBP28.74■■■□□ 2.19
ACAA1-218ENST00000489559 STK31Q9BXU1 1019 aa28.74■■■□□ 2.19
ACAA1-218ENST00000489559 TRMT112Q9UI30 125 aaKnown RBP28.74■■■□□ 2.19
ACAA1-218ENST00000489559 DICER1Q9UPY3 1922 aaKnown RBP28.73■■■□□ 2.19
ACAA1-218ENST00000489559 TIAM2Q8IVF5 1701 aa28.73■■■□□ 2.19
ACAA1-218ENST00000489559 C7orf43Q8WVR3 580 aa28.73■■■□□ 2.19
ACAA1-218ENST00000489559 NLRP3Q96P20 1036 aa28.73■■■□□ 2.19
ACAA1-218ENST00000489559 CACNA1FO60840 1977 aa28.73■■■□□ 2.19
ACAA1-218ENST00000489559 SH3TC1Q8TE82 1336 aa28.72■■■□□ 2.19
ACAA1-218ENST00000489559 HOXA10P31260 410 aaPredicted RBP28.72■■■□□ 2.19
ACAA1-218ENST00000489559 PRELPP51888 382 aa28.72■■■□□ 2.19
ACAA1-218ENST00000489559 LTBP3Q9NS15 1303 aa28.71■■■□□ 2.19
ACAA1-218ENST00000489559 ATP5J2-PTCD1G3V325 749 aa28.71■■■□□ 2.19
ACAA1-218ENST00000489559 DDX58O95786 925 aaKnown RBP28.71■■■□□ 2.19
ACAA1-218ENST00000489559 DDX60Q8IY21 1712 aaKnown RBP28.7■■■□□ 2.19
ACAA1-218ENST00000489559 TRIM28Q13263 835 aaKnown RBP28.7■■■□□ 2.18
ACAA1-218ENST00000489559 CCDC93Q567U6 631 aa28.7■■■□□ 2.18
ACAA1-218ENST00000489559 C3orf67Q6ZVT6 689 aa28.7■■■□□ 2.18
ACAA1-218ENST00000489559 RBM17Q96I25 401 aaKnown RBP28.7■■■□□ 2.18
ACAA1-218ENST00000489559 TAOK3Q9H2K8 898 aa28.7■■■□□ 2.18
ACAA1-218ENST00000489559 MYH16Q9H6N6 1097 aa28.7■■■□□ 2.18
ACAA1-218ENST00000489559 SPINK5Q9NQ38 1064 aaPredicted RBP28.7■■■□□ 2.18
ACAA1-218ENST00000489559 ZC3H4Q9UPT8 1303 aaKnown RBP28.69■■■□□ 2.18
ACAA1-218ENST00000489559 TCERG1O14776 1098 aaKnown RBP28.69■■■□□ 2.18
ACAA1-218ENST00000489559 EXOSC9Q06265 439 aaKnown RBP28.69■■■□□ 2.18
ACAA1-218ENST00000489559 ZNF521Q96K83 1311 aa28.69■■■□□ 2.18
ACAA1-218ENST00000489559 SYNE4Q8N205 404 aa28.68■■■□□ 2.18
ACAA1-218ENST00000489559 CRAMP1Q96RY5 1269 aa28.68■■■□□ 2.18
ACAA1-218ENST00000489559 HCLS1P14317 486 aaPredicted RBP28.67■■■□□ 2.18
ACAA1-218ENST00000489559 VAMP4O75379 141 aa28.66■■■□□ 2.18
ACAA1-218ENST00000489559 ZNF428Q96B54 188 aa28.66■■■□□ 2.18
ACAA1-218ENST00000489559 MYD88Q99836 296 aa28.66■■■□□ 2.18
ACAA1-218ENST00000489559 SLC4A2P04920 1241 aa28.65■■■□□ 2.18
ACAA1-218ENST00000489559 C1QTNF8P60827 252 aa28.64■■■□□ 2.18
ACAA1-218ENST00000489559 OLFM4Q6UX06 510 aa28.64■■■□□ 2.18
ACAA1-218ENST00000489559 KSR2Q6VAB6 950 aa28.64■■■□□ 2.18
ACAA1-218ENST00000489559 RTKN2Q8IZC4 609 aa28.64■■■□□ 2.18
ACAA1-218ENST00000489559 FAM89AQ96GI7 184 aa28.64■■■□□ 2.18
ACAA1-218ENST00000489559 METTL22Q9BUU2 404 aaPredicted RBP28.64■■■□□ 2.18
ACAA1-218ENST00000489559 CC2D2BQ6DHV5 1058 aa28.63■■■□□ 2.17
ACAA1-218ENST00000489559 MAP3K2Q9Y2U5 619 aa28.63■■■□□ 2.17
ACAA1-218ENST00000489559 KDM2BQ8NHM5 1336 aa28.63■■■□□ 2.17
ACAA1-218ENST00000489559 FKBP4Q02790 459 aaKnown RBP eCLIP28.62■■■□□ 2.17
ACAA1-218ENST00000489559 G2E3Q7L622 706 aa28.62■■■□□ 2.17
ACAA1-218ENST00000489559 CCDC191Q8NCU4 936 aa28.62■■■□□ 2.17
ACAA1-218ENST00000489559 PI4KAP2A4QPH2 592 aa28.61■■■□□ 2.17
ACAA1-218ENST00000489559 PPEF1O14829 653 aaPredicted RBP28.61■■■□□ 2.17
ACAA1-218ENST00000489559 PI4KAP1Q8N8J0 262 aa28.61■■■□□ 2.17
ACAA1-218ENST00000489559 SNED1Q8TER0 1413 aa28.6■■■□□ 2.17
ACAA1-218ENST00000489559 KIF3CO14782 793 aa28.6■■■□□ 2.17
ACAA1-218ENST00000489559 ABCC4O15439 1325 aa28.6■■■□□ 2.17
ACAA1-218ENST00000489559 FLIIQ13045 1269 aa28.59■■■□□ 2.17
ACAA1-218ENST00000489559 RTL5Q5HYW3 569 aaPredicted RBP28.59■■■□□ 2.17
ACAA1-218ENST00000489559 DIEXFQ68CQ4 756 aaKnown RBP28.59■■■□□ 2.17
ACAA1-218ENST00000489559 ZBTB38Q8NAP3 1195 aaPredicted RBP28.59■■■□□ 2.17
ACAA1-218ENST00000489559 NMRK2Q9NPI5 230 aa28.59■■■□□ 2.17
ACAA1-218ENST00000489559 CWC25Q9NXE8 425 aaPredicted RBP28.59■■■□□ 2.17
ACAA1-218ENST00000489559 TAF1P21675 1872 aa28.59■■■□□ 2.17
ACAA1-218ENST00000489559 IRS4O14654 1257 aaPredicted RBP28.58■■■□□ 2.17
ACAA1-218ENST00000489559 GRIPAP1Q4V328 841 aa28.58■■■□□ 2.17
ACAA1-218ENST00000489559 DDX46Q7L014 1031 aaKnown RBP28.58■■■□□ 2.17
ACAA1-218ENST00000489559 GLTPD2A6NH11 291 aa28.57■■■□□ 2.16
ACAA1-218ENST00000489559 NEXNQ0ZGT2 675 aa28.57■■■□□ 2.16
ACAA1-218ENST00000489559 PCCAP05165 728 aaPredicted RBP28.56■■■□□ 2.16
ACAA1-218ENST00000489559 HSP90B1P14625 803 aaKnown RBP28.56■■■□□ 2.16
ACAA1-218ENST00000489559 SF3B3Q15393 1217 aaKnown RBP28.56■■■□□ 2.16
ACAA1-218ENST00000489559 PSMD1Q99460 953 aa28.56■■■□□ 2.16
ACAA1-218ENST00000489559 ZNF277Q9NRM2 450 aaPredicted RBP28.56■■■□□ 2.16
ACAA1-218ENST00000489559 E9PSI1 815 aa28.55■■■□□ 2.16
ACAA1-218ENST00000489559 BBOX1O75936 387 aa28.55■■■□□ 2.16
ACAA1-218ENST00000489559 FKBP5Q13451 457 aaPredicted RBP28.55■■■□□ 2.16
ACAA1-218ENST00000489559 GRAPQ13588 217 aa28.55■■■□□ 2.16
ACAA1-218ENST00000489559 GRAPLQ8TC17 118 aaPredicted RBP28.55■■■□□ 2.16
ACAA1-218ENST00000489559 TMX4Q9H1E5 349 aaPredicted RBP28.55■■■□□ 2.16
ACAA1-218ENST00000489559 ATP6V0A2Q9Y487 856 aa28.55■■■□□ 2.16
ACAA1-218ENST00000489559 IGKV5-2P06315 115 aa28.54■■■□□ 2.16
ACAA1-218ENST00000489559 DPY19L2Q6NUT2 758 aa28.53■■■□□ 2.16
ACAA1-218ENST00000489559 IARSP41252 1262 aaKnown RBP28.52■■■□□ 2.16
ACAA1-218ENST00000489559 SLC51AQ86UW1 340 aa28.52■■■□□ 2.16
ACAA1-218ENST00000489559 RRAGCQ9HB90 399 aa28.52■■■□□ 2.16
ACAA1-218ENST00000489559 SP8Q8IXZ3 490 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms