RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 KRT85P78386 507 aa23.2■■□□□ 1.3
HMG20B-213ENST00000488973 FAM200AQ8TCP9 573 aa23.2■■□□□ 1.3
HMG20B-213ENST00000488973 EVI5LQ96CN4 794 aa23.2■■□□□ 1.3
HMG20B-213ENST00000488973 CHPF2Q9P2E5 772 aa23.2■■□□□ 1.3
HMG20B-213ENST00000488973 CCDC171Q6TFL3 1326 aa23.2■■□□□ 1.3
HMG20B-213ENST00000488973 TSC1Q92574 1164 aa23.2■■□□□ 1.3
HMG20B-213ENST00000488973 CHAF1AQ13111 956 aaPredicted RBP23.19■■□□□ 1.3
HMG20B-213ENST00000488973 ERC1Q8IUD2 1116 aa23.19■■□□□ 1.3
HMG20B-213ENST00000488973 PYCARDQ9ULZ3 195 aa23.19■■□□□ 1.3
HMG20B-213ENST00000488973 MAP3K11Q16584 847 aa23.19■■□□□ 1.3
HMG20B-213ENST00000488973 LARP1BQ659C4 914 aaKnown RBP23.18■■□□□ 1.3
HMG20B-213ENST00000488973 TTC6Q86TZ1 520 aa23.18■■□□□ 1.3
HMG20B-213ENST00000488973 LTN1O94822 1766 aa23.18■■□□□ 1.3
HMG20B-213ENST00000488973 ADCY9O60503 1353 aa23.18■■□□□ 1.3
HMG20B-213ENST00000488973 PDCP20941 246 aa23.18■■□□□ 1.3
HMG20B-213ENST00000488973 HIP1O00291 1037 aa23.17■■□□□ 1.3
HMG20B-213ENST00000488973 NUP62CLQ9H1M0 184 aa23.17■■□□□ 1.3
HMG20B-213ENST00000488973 BCL2L12Q9HB09 334 aa23.17■■□□□ 1.3
HMG20B-213ENST00000488973 IFIT2P09913 472 aaKnown RBP23.17■■□□□ 1.3
HMG20B-213ENST00000488973 PSMA5P28066 241 aa23.17■■□□□ 1.3
HMG20B-213ENST00000488973 CREB3L3Q68CJ9 461 aa23.17■■□□□ 1.3
HMG20B-213ENST00000488973 TPCN1Q9ULQ1 816 aa23.17■■□□□ 1.3
HMG20B-213ENST00000488973 RBM8AQ9Y5S9 174 aaKnown RBP23.17■■□□□ 1.3
HMG20B-213ENST00000488973 MAP4K1Q92918 833 aa23.16■■□□□ 1.3
HMG20B-213ENST00000488973 SNRKQ9NRH2 765 aa23.16■■□□□ 1.3
HMG20B-213ENST00000488973 HDAC5Q9UQL6 1122 aa23.16■■□□□ 1.3
HMG20B-213ENST00000488973 NECAB1Q8N987 351 aa23.16■■□□□ 1.3
HMG20B-213ENST00000488973 SPC24Q8NBT2 197 aa23.16■■□□□ 1.3
HMG20B-213ENST00000488973 LTV1Q96GA3 475 aaPredicted RBP23.16■■□□□ 1.3
HMG20B-213ENST00000488973 ADGRL3Q9HAR2 1447 aa23.15■■□□□ 1.3
HMG20B-213ENST00000488973 MRVI1Q9Y6F6 885 aa23.15■■□□□ 1.3
HMG20B-213ENST00000488973 LMO7Q8WWI1 1683 aa23.15■■□□□ 1.3
HMG20B-213ENST00000488973 ALDH1L1O75891 902 aa23.14■■□□□ 1.3
HMG20B-213ENST00000488973 TYRO3Q06418 890 aa23.14■■□□□ 1.3
HMG20B-213ENST00000488973 ANKRD1Q15327 319 aa23.14■■□□□ 1.29
HMG20B-213ENST00000488973 ALDH8A1Q9H2A2 487 aaPredicted RBP23.14■■□□□ 1.29
HMG20B-213ENST00000488973 CDC37L1Q7L3B6 337 aa23.13■■□□□ 1.29
HMG20B-213ENST00000488973 SCAND2PQ9GZW5 306 aaPredicted RBP23.13■■□□□ 1.29
HMG20B-213ENST00000488973 RIOK3O14730 519 aaKnown RBP23.13■■□□□ 1.29
HMG20B-213ENST00000488973 LIG1P18858 919 aa23.12■■□□□ 1.29
HMG20B-213ENST00000488973 KCNJ4P48050 445 aa23.12■■□□□ 1.29
HMG20B-213ENST00000488973 SLC27A2O14975 620 aa23.12■■□□□ 1.29
HMG20B-213ENST00000488973 CTIFO43310 598 aaKnown RBP23.12■■□□□ 1.29
HMG20B-213ENST00000488973 DTNBO60941 627 aa23.12■■□□□ 1.29
HMG20B-213ENST00000488973 C9orf78Q9NZ63 289 aaPredicted RBP23.12■■□□□ 1.29
HMG20B-213ENST00000488973 RBM43Q6ZSC3 357 aaKnown RBP23.11■■□□□ 1.29
HMG20B-213ENST00000488973 AACSQ86V21 672 aa23.11■■□□□ 1.29
HMG20B-213ENST00000488973 USHBP1Q8N6Y0 703 aa23.11■■□□□ 1.29
HMG20B-213ENST00000488973 LGR6Q9HBX8 967 aa23.11■■□□□ 1.29
HMG20B-213ENST00000488973 DDX19AQ9NUU7 478 aaKnown RBP23.11■■□□□ 1.29
HMG20B-213ENST00000488973 DBF4Q9UBU7 674 aaPredicted RBP23.11■■□□□ 1.29
HMG20B-213ENST00000488973 RNF20Q5VTR2 975 aa23.11■■□□□ 1.29
HMG20B-213ENST00000488973 NUTM2GQ5VZR2 741 aa23.11■■□□□ 1.29
HMG20B-213ENST00000488973 ANKRD7Q92527 254 aa23.11■■□□□ 1.29
HMG20B-213ENST00000488973 TNMDQ9H2S6 317 aa23.11■■□□□ 1.29
HMG20B-213ENST00000488973 NPHP3Q7Z494 1330 aa23.11■■□□□ 1.29
HMG20B-213ENST00000488973 NMIQ13287 307 aaPredicted RBP23.1■■□□□ 1.29
HMG20B-213ENST00000488973 ABTB2Q8N961 1025 aa23.1■■□□□ 1.29
HMG20B-213ENST00000488973 PTGS1P23219 599 aa23.1■■□□□ 1.29
HMG20B-213ENST00000488973 BLOC1S2Q6QNY1 142 aa23.1■■□□□ 1.29
HMG20B-213ENST00000488973 DDX54Q8TDD1 881 aaKnown RBP23.1■■□□□ 1.29
HMG20B-213ENST00000488973 FAM227BQ96M60 508 aa23.1■■□□□ 1.29
HMG20B-213ENST00000488973 FAM177BA6PVY3 158 aa23.09■■□□□ 1.29
HMG20B-213ENST00000488973 CAMK4Q16566 473 aa23.09■■□□□ 1.29
HMG20B-213ENST00000488973 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.09■■□□□ 1.29
HMG20B-213ENST00000488973 FERMT3Q86UX7 667 aa23.09■■□□□ 1.29
HMG20B-213ENST00000488973 LUZP1Q86V48 1076 aa23.09■■□□□ 1.29
HMG20B-213ENST00000488973 PDCL2Q8N4E4 241 aa23.09■■□□□ 1.29
HMG20B-213ENST00000488973 PA2G4Q9UQ80 394 aaKnown RBP23.09■■□□□ 1.29
HMG20B-213ENST00000488973 KCNQ3O43525 872 aa23.09■■□□□ 1.29
HMG20B-213ENST00000488973 ANXA1P04083 346 aa23.09■■□□□ 1.29
HMG20B-213ENST00000488973 DACT1Q9NYF0 836 aa23.09■■□□□ 1.29
HMG20B-213ENST00000488973 GOLGA6L4A6NEF3 574 aa23.08■■□□□ 1.29
HMG20B-213ENST00000488973 RPS6KB1P23443 525 aa23.08■■□□□ 1.29
HMG20B-213ENST00000488973 SPATA32Q96LK8 384 aa23.08■■□□□ 1.29
HMG20B-213ENST00000488973 CBX8Q9HC52 389 aa23.08■■□□□ 1.29
HMG20B-213ENST00000488973 MAP3K2Q9Y2U5 619 aa23.08■■□□□ 1.29
HMG20B-213ENST00000488973 ANO6Q4KMQ2 910 aa23.08■■□□□ 1.28
HMG20B-213ENST00000488973 KSR2Q6VAB6 950 aa23.08■■□□□ 1.28
HMG20B-213ENST00000488973 CHMP3Q9Y3E7 222 aa23.08■■□□□ 1.28
HMG20B-213ENST00000488973 BTBD11A6QL63 1104 aa23.07■■□□□ 1.28
HMG20B-213ENST00000488973 TEFQ10587 303 aa23.07■■□□□ 1.28
HMG20B-213ENST00000488973 FAM173BQ6P4H8 233 aa23.07■■□□□ 1.28
HMG20B-213ENST00000488973 CLSTN2Q9H4D0 955 aa23.07■■□□□ 1.28
HMG20B-213ENST00000488973 PLA2G4DQ86XP0 818 aa23.07■■□□□ 1.28
HMG20B-213ENST00000488973 TDRD7Q8NHU6 1098 aaKnown RBP23.07■■□□□ 1.28
HMG20B-213ENST00000488973 LEO1Q8WVC0 666 aaPredicted RBP23.07■■□□□ 1.28
HMG20B-213ENST00000488973 IP6K1Q92551 441 aa23.07■■□□□ 1.28
HMG20B-213ENST00000488973 ATP2B3Q16720 1220 aa23.06■■□□□ 1.28
HMG20B-213ENST00000488973 TSGA10IPQ3SY00 556 aa23.06■■□□□ 1.28
HMG20B-213ENST00000488973 CCDC186Q7Z3E2 898 aa23.06■■□□□ 1.28
HMG20B-213ENST00000488973 CKAP2LQ8IYA6 745 aa23.06■■□□□ 1.28
HMG20B-213ENST00000488973 HMG20BQ9P0W2 317 aa23.06■■□□□ 1.28
HMG20B-213ENST00000488973 JCADQ9P266 1359 aa23.06■■□□□ 1.28
HMG20B-213ENST00000488973 MED23Q9ULK4 1368 aa23.06■■□□□ 1.28
HMG20B-213ENST00000488973 PHF8Q9UPP1 1060 aa23.06■■□□□ 1.28
HMG20B-213ENST00000488973 RGPD2P0DJD1 1756 aa23.06■■□□□ 1.28
HMG20B-213ENST00000488973 SASH1O94885 1247 aa23.06■■□□□ 1.28
HMG20B-213ENST00000488973 CBX1P83916 185 aa23.06■■□□□ 1.28
HMG20B-213ENST00000488973 ZNF75DP51815 510 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms