RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 IL16Q14005 1332 aa19.01■□□□□ 0.63
MCF2L-229ENST00000488765 GLI2P10070 1586 aa19.01■□□□□ 0.63
MCF2L-229ENST00000488765 PHACTR2O75167 634 aa19.01■□□□□ 0.63
MCF2L-229ENST00000488765 RPAP2Q8IXW5 612 aaPredicted RBP19.01■□□□□ 0.63
MCF2L-229ENST00000488765 TAOK2Q9UL54 1235 aa19.01■□□□□ 0.63
MCF2L-229ENST00000488765 ADCK5Q3MIX3 580 aa19.01■□□□□ 0.63
MCF2L-229ENST00000488765 MSH6P52701 1360 aa19.01■□□□□ 0.63
MCF2L-229ENST00000488765 CAMSAP1Q5T5Y3 1602 aa19.01■□□□□ 0.63
MCF2L-229ENST00000488765 BRD2P25440 801 aaKnown RBP19■□□□□ 0.63
MCF2L-229ENST00000488765 CCZ1BP86790 482 aa19■□□□□ 0.63
MCF2L-229ENST00000488765 CCZ1P86791 482 aaPredicted RBP19■□□□□ 0.63
MCF2L-229ENST00000488765 GOLGA8FQ08AF8 430 aa19■□□□□ 0.63
MCF2L-229ENST00000488765 GOLGA8DPQ0D2H9 430 aa19■□□□□ 0.63
MCF2L-229ENST00000488765 ISM2Q6H9L7 571 aa19■□□□□ 0.63
MCF2L-229ENST00000488765 RTL1A6NKG5 1358 aa19■□□□□ 0.63
MCF2L-229ENST00000488765 CCDC171Q6TFL3 1326 aa19■□□□□ 0.63
MCF2L-229ENST00000488765 KRT85P78386 507 aa19■□□□□ 0.63
MCF2L-229ENST00000488765 RGS12O14924 1447 aa19■□□□□ 0.63
MCF2L-229ENST00000488765 QRICH2Q9H0J4 1663 aa19■□□□□ 0.63
MCF2L-229ENST00000488765 GPS2Q13227 327 aa19■□□□□ 0.63
MCF2L-229ENST00000488765 CT47A1Q5JQC4 288 aaPredicted RBP19■□□□□ 0.63
MCF2L-229ENST00000488765 CCDC61Q9Y6R9 512 aa19■□□□□ 0.63
MCF2L-229ENST00000488765 PSEN1P49768 467 aa18.99■□□□□ 0.63
MCF2L-229ENST00000488765 LMOD3Q0VAK6 560 aa18.99■□□□□ 0.63
MCF2L-229ENST00000488765 SRLQ86TD4 932 aa18.99■□□□□ 0.63
MCF2L-229ENST00000488765 GEMIN8Q9NWZ8 242 aaKnown RBP18.99■□□□□ 0.63
MCF2L-229ENST00000488765 NEXMIFQ5QGS0 1516 aa18.99■□□□□ 0.63
MCF2L-229ENST00000488765 SLC4A2P04920 1241 aa18.99■□□□□ 0.63
MCF2L-229ENST00000488765 GNAI1P63096 354 aa18.99■□□□□ 0.63
MCF2L-229ENST00000488765 JAKMIP1Q96N16 626 aaKnown RBP18.99■□□□□ 0.63
MCF2L-229ENST00000488765 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.99■□□□□ 0.63
MCF2L-229ENST00000488765 ADAM21Q9UKJ8 722 aa18.98■□□□□ 0.63
MCF2L-229ENST00000488765 MED14O60244 1454 aa18.98■□□□□ 0.63
MCF2L-229ENST00000488765 PNMA6EA0A0J9YXQ4 647 aa18.98■□□□□ 0.63
MCF2L-229ENST00000488765 MCM6Q14566 821 aa18.98■□□□□ 0.63
MCF2L-229ENST00000488765 E4F1Q66K89 784 aaPredicted RBP18.98■□□□□ 0.63
MCF2L-229ENST00000488765 RNF216Q9NWF9 866 aaPredicted RBP18.98■□□□□ 0.63
MCF2L-229ENST00000488765 NGDNQ8NEJ9 315 aaKnown RBP18.98■□□□□ 0.63
MCF2L-229ENST00000488765 SMC2O95347 1197 aa18.97■□□□□ 0.63
MCF2L-229ENST00000488765 WWC2Q6AWC2 1192 aa18.97■□□□□ 0.63
MCF2L-229ENST00000488765 G2E3Q7L622 706 aa18.97■□□□□ 0.63
MCF2L-229ENST00000488765 REXO1L1PQ8IX06 675 aa18.97■□□□□ 0.63
MCF2L-229ENST00000488765 FTOQ9C0B1 505 aaKnown RBP eCLIP18.97■□□□□ 0.63
MCF2L-229ENST00000488765 PDRG1Q9NUG6 133 aa18.97■□□□□ 0.63
MCF2L-229ENST00000488765 IBSPP21815 317 aaPredicted RBP18.96■□□□□ 0.63
MCF2L-229ENST00000488765 DNAJC21Q5F1R6 531 aaKnown RBP18.96■□□□□ 0.63
MCF2L-229ENST00000488765 SULT6B1Q6IMI4 303 aa18.96■□□□□ 0.63
MCF2L-229ENST00000488765 PRPF40BQ6NWY9 871 aaKnown RBP18.96■□□□□ 0.63
MCF2L-229ENST00000488765 BANK1Q8NDB2 785 aa18.96■□□□□ 0.63
MCF2L-229ENST00000488765 HDGFP51858 240 aaKnown RBP18.96■□□□□ 0.63
MCF2L-229ENST00000488765 ME3Q16798 604 aa18.96■□□□□ 0.63
MCF2L-229ENST00000488765 TTC31Q49AM3 519 aaPredicted RBP18.96■□□□□ 0.63
MCF2L-229ENST00000488765 LMOD2Q6P5Q4 547 aa18.96■□□□□ 0.63
MCF2L-229ENST00000488765 ZNF428Q96B54 188 aa18.96■□□□□ 0.63
MCF2L-229ENST00000488765 PPP1R13BQ96KQ4 1090 aa18.96■□□□□ 0.63
MCF2L-229ENST00000488765 LRRCC1Q9C099 1032 aa18.96■□□□□ 0.63
MCF2L-229ENST00000488765 ARGLU1Q9NWB6 273 aaPredicted RBP18.96■□□□□ 0.63
MCF2L-229ENST00000488765 VPS18Q9P253 973 aa18.96■□□□□ 0.63
MCF2L-229ENST00000488765 PIK3C2BO00750 1634 aa18.96■□□□□ 0.63
MCF2L-229ENST00000488765 HSPA4P34932 840 aa18.96■□□□□ 0.63
MCF2L-229ENST00000488765 TDRD7Q8NHU6 1098 aaKnown RBP18.96■□□□□ 0.63
MCF2L-229ENST00000488765 MYCBPQ99417 103 aaPredicted RBP18.96■□□□□ 0.63
MCF2L-229ENST00000488765 ORC3Q9UBD5 711 aaPredicted RBP18.96■□□□□ 0.63
MCF2L-229ENST00000488765 RIMBP3CA6NJZ7 1639 aa18.96■□□□□ 0.63
MCF2L-229ENST00000488765 RIMBP3BA6NNM3 1639 aa18.96■□□□□ 0.63
MCF2L-229ENST00000488765 RIMBP3Q9UFD9 1639 aa18.96■□□□□ 0.63
MCF2L-229ENST00000488765 MYO5BQ9ULV0 1848 aa18.96■□□□□ 0.63
MCF2L-229ENST00000488765 ANAPC15P60006 121 aa18.95■□□□□ 0.62
MCF2L-229ENST00000488765 TMC6Q7Z403 805 aa18.95■□□□□ 0.62
MCF2L-229ENST00000488765 AOPEPQ8N6M6 819 aa18.95■□□□□ 0.62
MCF2L-229ENST00000488765 PPLO60437 1756 aa18.95■□□□□ 0.62
MCF2L-229ENST00000488765 EVCP57679 992 aa18.95■□□□□ 0.62
MCF2L-229ENST00000488765 NFE2L2Q16236 605 aa18.95■□□□□ 0.62
MCF2L-229ENST00000488765 HSP90AB2PQ58FF8 381 aa18.95■□□□□ 0.62
MCF2L-229ENST00000488765 MCM10Q7L590 875 aa18.95■□□□□ 0.62
MCF2L-229ENST00000488765 ATG3Q9NT62 314 aa18.95■□□□□ 0.62
MCF2L-229ENST00000488765 HMMRO75330 724 aa18.94■□□□□ 0.62
MCF2L-229ENST00000488765 ZRANB2O95218 330 aaKnown RBP eCLIP18.94■□□□□ 0.62
MCF2L-229ENST00000488765 TBC1D8O95759 1140 aa18.94■□□□□ 0.62
MCF2L-229ENST00000488765 GNAI3P08754 354 aa18.94■□□□□ 0.62
MCF2L-229ENST00000488765 SLFNL1Q499Z3 407 aa18.94■□□□□ 0.62
MCF2L-229ENST00000488765 RABEP2Q9H5N1 569 aa18.94■□□□□ 0.62
MCF2L-229ENST00000488765 CWC15Q9P013 229 aaKnown RBP18.94■□□□□ 0.62
MCF2L-229ENST00000488765 H3BQF6 201 aa18.94■□□□□ 0.62
MCF2L-229ENST00000488765 GOLGA6L1Q8N7Z2 621 aa18.94■□□□□ 0.62
MCF2L-229ENST00000488765 PGBD1Q96JS3 809 aa18.94■□□□□ 0.62
MCF2L-229ENST00000488765 EID1Q9Y6B2 187 aa18.94■□□□□ 0.62
MCF2L-229ENST00000488765 N4BP1O75113 896 aaKnown RBP18.93■□□□□ 0.62
MCF2L-229ENST00000488765 LARP1Q6PKG0 1096 aaKnown RBP18.93■□□□□ 0.62
MCF2L-229ENST00000488765 AMOTL2Q9Y2J4 779 aa18.93■□□□□ 0.62
MCF2L-229ENST00000488765 ATP10DQ9P241 1426 aa18.93■□□□□ 0.62
MCF2L-229ENST00000488765 BIN1O00499 593 aa18.93■□□□□ 0.62
MCF2L-229ENST00000488765 FBXO18Q8NFZ0 1043 aa18.93■□□□□ 0.62
MCF2L-229ENST00000488765 NCAPGQ9BPX3 1015 aa18.93■□□□□ 0.62
MCF2L-229ENST00000488765 FCHSD2O94868 740 aa18.92■□□□□ 0.62
MCF2L-229ENST00000488765 ST3GAL1Q11201 340 aa18.92■□□□□ 0.62
MCF2L-229ENST00000488765 TTC14Q96N46 770 aa18.92■□□□□ 0.62
MCF2L-229ENST00000488765 SUGCTQ9HAC7 445 aa18.92■□□□□ 0.62
MCF2L-229ENST00000488765 HYPKQ9NX55 129 aa18.92■□□□□ 0.62
MCF2L-229ENST00000488765 GUCY2CP25092 1073 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms