RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 LRP10Q7Z4F1 713 aa17.09■□□□□ 0.33
ABCB1-207ENST00000488737 ZNF496Q96IT1 587 aaPredicted RBP17.09■□□□□ 0.33
ABCB1-207ENST00000488737 RBSNQ9H1K0 784 aa17.09■□□□□ 0.33
ABCB1-207ENST00000488737 CPDO75976 1380 aa17.09■□□□□ 0.33
ABCB1-207ENST00000488737 COPS6Q7L5N1 327 aa17.08■□□□□ 0.33
ABCB1-207ENST00000488737 TTC5Q8N0Z6 440 aa17.08■□□□□ 0.33
ABCB1-207ENST00000488737 CHAMP1Q96JM3 812 aa17.08■□□□□ 0.33
ABCB1-207ENST00000488737 ANO8Q9HCE9 1232 aaPredicted RBP17.08■□□□□ 0.33
ABCB1-207ENST00000488737 NSFL1CQ9UNZ2 370 aaKnown RBP17.08■□□□□ 0.33
ABCB1-207ENST00000488737 CYP46A1Q9Y6A2 500 aa17.08■□□□□ 0.33
ABCB1-207ENST00000488737 GLI3P10071 1580 aa17.08■□□□□ 0.32
ABCB1-207ENST00000488737 ERBB4Q15303 1308 aa17.08■□□□□ 0.32
ABCB1-207ENST00000488737 ZKSCAN1P17029 563 aaPredicted RBP17.07■□□□□ 0.32
ABCB1-207ENST00000488737 ANKRD13DQ6ZTN6 518 aa17.07■□□□□ 0.32
ABCB1-207ENST00000488737 FMNL2Q96PY5 1086 aa17.07■□□□□ 0.32
ABCB1-207ENST00000488737 MYD88Q99836 296 aa17.07■□□□□ 0.32
ABCB1-207ENST00000488737 COPRSQ9NQ92 184 aa17.07■□□□□ 0.32
ABCB1-207ENST00000488737 ZSCAN22P10073 491 aaPredicted RBP17.07■□□□□ 0.32
ABCB1-207ENST00000488737 MYL6BP14649 208 aa17.07■□□□□ 0.32
ABCB1-207ENST00000488737 MAP4K1Q92918 833 aa17.07■□□□□ 0.32
ABCB1-207ENST00000488737 PDLIM2Q96JY6 352 aa17.07■□□□□ 0.32
ABCB1-207ENST00000488737 JAKMIP1Q96N16 626 aaKnown RBP17.07■□□□□ 0.32
ABCB1-207ENST00000488737 PDRG1Q9NUG6 133 aa17.07■□□□□ 0.32
ABCB1-207ENST00000488737 SMC3Q9UQE7 1217 aa17.07■□□□□ 0.32
ABCB1-207ENST00000488737 RFX7Q2KHR2 1363 aa17.06■□□□□ 0.32
ABCB1-207ENST00000488737 JCADQ9P266 1359 aa17.06■□□□□ 0.32
ABCB1-207ENST00000488737 PHF14O94880 888 aa17.06■□□□□ 0.32
ABCB1-207ENST00000488737 CSB-PGBD3P0DP91 1061 aa17.06■□□□□ 0.32
ABCB1-207ENST00000488737 PRPF40BQ6NWY9 871 aaKnown RBP17.06■□□□□ 0.32
ABCB1-207ENST00000488737 ATP6V1DQ9Y5K8 247 aa17.06■□□□□ 0.32
ABCB1-207ENST00000488737 MED23Q9ULK4 1368 aa17.06■□□□□ 0.32
ABCB1-207ENST00000488737 SYCE3A1L190 88 aa17.05■□□□□ 0.32
ABCB1-207ENST00000488737 CYP27B1O15528 508 aa17.05■□□□□ 0.32
ABCB1-207ENST00000488737 STX6O43752 255 aa17.05■□□□□ 0.32
ABCB1-207ENST00000488737 PDIA4P13667 645 aaKnown RBP17.05■□□□□ 0.32
ABCB1-207ENST00000488737 NMIQ13287 307 aaPredicted RBP17.05■□□□□ 0.32
ABCB1-207ENST00000488737 CADPS2Q86UW7 1296 aa17.05■□□□□ 0.32
ABCB1-207ENST00000488737 KLHL34Q8N239 644 aa17.05■□□□□ 0.32
ABCB1-207ENST00000488737 CCDC8Q9H0W5 538 aaPredicted RBP17.05■□□□□ 0.32
ABCB1-207ENST00000488737 RBM8AQ9Y5S9 174 aaKnown RBP17.05■□□□□ 0.32
ABCB1-207ENST00000488737 PSMA5P28066 241 aa17.05■□□□□ 0.32
ABCB1-207ENST00000488737 RABL6Q3YEC7 729 aaPredicted RBP17.05■□□□□ 0.32
ABCB1-207ENST00000488737 CREB3L3Q68CJ9 461 aa17.05■□□□□ 0.32
ABCB1-207ENST00000488737 USP48Q86UV5 1035 aa17.05■□□□□ 0.32
ABCB1-207ENST00000488737 ZSCAN30Q86W11 494 aa17.05■□□□□ 0.32
ABCB1-207ENST00000488737 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.05■□□□□ 0.32
ABCB1-207ENST00000488737 SYT1P21579 422 aa17.04■□□□□ 0.32
ABCB1-207ENST00000488737 ADCK5Q3MIX3 580 aa17.04■□□□□ 0.32
ABCB1-207ENST00000488737 RNF20Q5VTR2 975 aa17.04■□□□□ 0.32
ABCB1-207ENST00000488737 ALDH8A1Q9H2A2 487 aaPredicted RBP17.04■□□□□ 0.32
ABCB1-207ENST00000488737 SPATA31A3Q5VYP0 1347 aa17.04■□□□□ 0.32
ABCB1-207ENST00000488737 UBR2Q8IWV8 1755 aa17.04■□□□□ 0.32
ABCB1-207ENST00000488737 F13A1P00488 732 aa17.03■□□□□ 0.32
ABCB1-207ENST00000488737 RFX5P48382 616 aaPredicted RBP17.03■□□□□ 0.32
ABCB1-207ENST00000488737 EPHA10Q5JZY3 1008 aa17.03■□□□□ 0.32
ABCB1-207ENST00000488737 FAM227BQ96M60 508 aa17.03■□□□□ 0.32
ABCB1-207ENST00000488737 FSD1Q9BTV5 496 aa17.03■□□□□ 0.32
ABCB1-207ENST00000488737 SIL1Q9H173 461 aa17.03■□□□□ 0.32
ABCB1-207ENST00000488737 TLR7Q9NYK1 1049 aaKnown RBP17.03■□□□□ 0.32
ABCB1-207ENST00000488737 USP16Q9Y5T5 823 aa17.03■□□□□ 0.32
ABCB1-207ENST00000488737 TSPY26PQ9H489 355 aa17.03■□□□□ 0.32
ABCB1-207ENST00000488737 HMG20BQ9P0W2 317 aa17.03■□□□□ 0.32
ABCB1-207ENST00000488737 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.03■□□□□ 0.32
ABCB1-207ENST00000488737 SLC27A2O14975 620 aa17.02■□□□□ 0.32
ABCB1-207ENST00000488737 LARGE1O95461 756 aa17.02■□□□□ 0.32
ABCB1-207ENST00000488737 ATP5JP18859 108 aa17.02■□□□□ 0.32
ABCB1-207ENST00000488737 KCNJ4P48050 445 aa17.02■□□□□ 0.32
ABCB1-207ENST00000488737 CSPP1Q1MSJ5 1256 aa17.02■□□□□ 0.32
ABCB1-207ENST00000488737 PLBD2Q8NHP8 589 aa17.02■□□□□ 0.32
ABCB1-207ENST00000488737 BOLA2Q9H3K6 86 aa17.02■□□□□ 0.32
ABCB1-207ENST00000488737 NUP188Q5SRE5 1749 aa17.02■□□□□ 0.31
ABCB1-207ENST00000488737 A0A0D9SFI3 127 aa17.01■□□□□ 0.31
ABCB1-207ENST00000488737 CPA1P15085 419 aa17.01■□□□□ 0.31
ABCB1-207ENST00000488737 CABP4P57796 275 aa17.01■□□□□ 0.31
ABCB1-207ENST00000488737 PTPN12Q05209 780 aaKnown RBP17.01■□□□□ 0.31
ABCB1-207ENST00000488737 ANKRD1Q15327 319 aa17.01■□□□□ 0.31
ABCB1-207ENST00000488737 TSGA10IPQ3SY00 556 aa17.01■□□□□ 0.31
ABCB1-207ENST00000488737 LETM1O95202 739 aaPredicted RBP17.01■□□□□ 0.31
ABCB1-207ENST00000488737 GJB2P29033 226 aa17.01■□□□□ 0.31
ABCB1-207ENST00000488737 CCDC83Q8IWF9 413 aa17.01■□□□□ 0.31
ABCB1-207ENST00000488737 DDX17Q92841 729 aaKnown RBP17.01■□□□□ 0.31
ABCB1-207ENST00000488737 PAPPAQ13219 1627 aa17■□□□□ 0.31
ABCB1-207ENST00000488737 GADD45BO75293 160 aaPredicted RBP17■□□□□ 0.31
ABCB1-207ENST00000488737 UBE2HP62256 183 aa17■□□□□ 0.31
ABCB1-207ENST00000488737 TNNI3KQ59H18 835 aa17■□□□□ 0.31
ABCB1-207ENST00000488737 KLHDC4Q8TBB5 520 aa17■□□□□ 0.31
ABCB1-207ENST00000488737 FPGT-TNNI3KV9GXZ4 949 aa17■□□□□ 0.31
ABCB1-207ENST00000488737 CASP7P55210 303 aa16.99■□□□□ 0.31
ABCB1-207ENST00000488737 CHRNA2Q15822 529 aa16.99■□□□□ 0.31
ABCB1-207ENST00000488737 TICAM2Q86XR7 235 aa16.99■□□□□ 0.31
ABCB1-207ENST00000488737 CABLES1Q8TDN4 633 aa16.99■□□□□ 0.31
ABCB1-207ENST00000488737 ME3Q16798 604 aa16.99■□□□□ 0.31
ABCB1-207ENST00000488737 CCDC183Q5T5S1 534 aa16.99■□□□□ 0.31
ABCB1-207ENST00000488737 UBE3BQ7Z3V4 1068 aa16.99■□□□□ 0.31
ABCB1-207ENST00000488737 FAM184AQ8NB25 1140 aa16.99■□□□□ 0.31
ABCB1-207ENST00000488737 GDPD2Q9HCC8 539 aa16.99■□□□□ 0.31
ABCB1-207ENST00000488737 DBNLQ9UJU6 430 aaKnown RBP16.99■□□□□ 0.31
ABCB1-207ENST00000488737 MTMR6Q9Y217 621 aa16.99■□□□□ 0.31
ABCB1-207ENST00000488737 CNPY2Q9Y2B0 182 aa16.99■□□□□ 0.31
ABCB1-207ENST00000488737 PCDH11XQ9BZA7 1347 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms