RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 PPP1R42Q7Z4L9 355 aa25.21■■□□□ 1.63
CD55-209ENST00000488171 SNED1Q8TER0 1413 aa25.21■■□□□ 1.63
CD55-209ENST00000488171 HOXA10P31260 410 aaPredicted RBP25.2■■□□□ 1.63
CD55-209ENST00000488171 CHPF2Q9P2E5 772 aa25.2■■□□□ 1.63
CD55-209ENST00000488171 HOXB7P09629 217 aa25.19■■□□□ 1.62
CD55-209ENST00000488171 ZNF853P0CG23 659 aa25.19■■□□□ 1.62
CD55-209ENST00000488171 ZEB1P37275 1124 aaPredicted RBP25.19■■□□□ 1.62
CD55-209ENST00000488171 C3orf67Q6ZVT6 689 aa25.19■■□□□ 1.62
CD55-209ENST00000488171 RTKN2Q8IZC4 609 aa25.19■■□□□ 1.62
CD55-209ENST00000488171 MBIPQ9NS73 344 aa25.19■■□□□ 1.62
CD55-209ENST00000488171 CCDC184Q52MB2 194 aa25.18■■□□□ 1.62
CD55-209ENST00000488171 HDGFL1Q5TGJ6 251 aa25.18■■□□□ 1.62
CD55-209ENST00000488171 RPGRQ92834 1020 aaKnown RBP25.18■■□□□ 1.62
CD55-209ENST00000488171 ZNF277Q9NRM2 450 aaPredicted RBP25.18■■□□□ 1.62
CD55-209ENST00000488171 SMC1BQ8NDV3 1235 aa25.18■■□□□ 1.62
CD55-209ENST00000488171 UTP14AQ9BVJ6 771 aaKnown RBP25.18■■□□□ 1.62
CD55-209ENST00000488171 HSP90AB3PQ58FF7 597 aa25.17■■□□□ 1.62
CD55-209ENST00000488171 DDNO94850 711 aaPredicted RBP25.16■■□□□ 1.62
CD55-209ENST00000488171 TCIRG1Q13488 830 aa25.16■■□□□ 1.62
CD55-209ENST00000488171 SLC10A5Q5PT55 438 aa25.16■■□□□ 1.62
CD55-209ENST00000488171 DUSP27Q5VZP5 1158 aa25.16■■□□□ 1.62
CD55-209ENST00000488171 NLRP10Q86W26 655 aa25.16■■□□□ 1.62
CD55-209ENST00000488171 DNAJC5GQ8N7S2 189 aa25.16■■□□□ 1.62
CD55-209ENST00000488171 CRAMP1Q96RY5 1269 aa25.16■■□□□ 1.62
CD55-209ENST00000488171 SYNE4Q8N205 404 aa25.15■■□□□ 1.62
CD55-209ENST00000488171 RBM17Q96I25 401 aaKnown RBP25.15■■□□□ 1.62
CD55-209ENST00000488171 IFT57Q9NWB7 429 aa25.15■■□□□ 1.62
CD55-209ENST00000488171 RNF123Q5XPI4 1314 aa25.14■■□□□ 1.62
CD55-209ENST00000488171 SLC51AQ86UW1 340 aa25.14■■□□□ 1.61
CD55-209ENST00000488171 NLRP3Q96P20 1036 aa25.14■■□□□ 1.61
CD55-209ENST00000488171 DBF4Q9UBU7 674 aaPredicted RBP25.14■■□□□ 1.61
CD55-209ENST00000488171 CC2D2BQ6DHV5 1058 aa25.13■■□□□ 1.61
CD55-209ENST00000488171 PSMD1Q99460 953 aa25.13■■□□□ 1.61
CD55-209ENST00000488171 LAMB2P55268 1798 aa25.12■■□□□ 1.61
CD55-209ENST00000488171 IARSP41252 1262 aaKnown RBP25.12■■□□□ 1.61
CD55-209ENST00000488171 GNAI1P63096 354 aa25.12■■□□□ 1.61
CD55-209ENST00000488171 HTRA3P83110 453 aa25.12■■□□□ 1.61
CD55-209ENST00000488171 CALD1Q05682 793 aaKnown RBP25.12■■□□□ 1.61
CD55-209ENST00000488171 PLBD2Q8NHP8 589 aa25.12■■□□□ 1.61
CD55-209ENST00000488171 PPEF1O14829 653 aaPredicted RBP25.11■■□□□ 1.61
CD55-209ENST00000488171 ZNF541Q9H0D2 1346 aa25.11■■□□□ 1.61
CD55-209ENST00000488171 ANKRD13DQ6ZTN6 518 aa25.1■■□□□ 1.61
CD55-209ENST00000488171 HYPKQ9NX55 129 aa25.1■■□□□ 1.61
CD55-209ENST00000488171 COL4A5P29400 1685 aa25.09■■□□□ 1.61
CD55-209ENST00000488171 HCLS1P14317 486 aaPredicted RBP25.09■■□□□ 1.61
CD55-209ENST00000488171 L3MBTL3Q96JM7 780 aaPredicted RBP25.09■■□□□ 1.61
CD55-209ENST00000488171 TRMT112Q9UI30 125 aaKnown RBP25.09■■□□□ 1.61
CD55-209ENST00000488171 ABCC4O15439 1325 aa25.08■■□□□ 1.61
CD55-209ENST00000488171 FZD9O00144 591 aa25.07■■□□□ 1.6
CD55-209ENST00000488171 TCERG1O14776 1098 aaKnown RBP25.07■■□□□ 1.6
CD55-209ENST00000488171 GRIPAP1Q4V328 841 aa25.07■■□□□ 1.6
CD55-209ENST00000488171 ISCA1Q9BUE6 129 aa25.07■■□□□ 1.6
CD55-209ENST00000488171 SH3TC1Q8TE82 1336 aa25.07■■□□□ 1.6
CD55-209ENST00000488171 SCN4AP35499 1836 aa25.07■■□□□ 1.6
CD55-209ENST00000488171 ZNF316A6NFI3 1004 aaPredicted RBP25.06■■□□□ 1.6
CD55-209ENST00000488171 ELL2O00472 640 aaPredicted RBP25.06■■□□□ 1.6
CD55-209ENST00000488171 C8orf58Q8NAV2 365 aa25.06■■□□□ 1.6
CD55-209ENST00000488171 ZNF428Q96B54 188 aa25.06■■□□□ 1.6
CD55-209ENST00000488171 DDX60Q8IY21 1712 aaKnown RBP25.06■■□□□ 1.6
CD55-209ENST00000488171 POTEIP0CG38 1075 aa25.05■■□□□ 1.6
CD55-209ENST00000488171 POTEJP0CG39 1038 aa25.05■■□□□ 1.6
CD55-209ENST00000488171 ATP6V0A2Q9Y487 856 aa25.05■■□□□ 1.6
CD55-209ENST00000488171 IQCA1LA6NCM1 817 aa25.05■■□□□ 1.6
CD55-209ENST00000488171 ATP5J2-PTCD1G3V325 749 aa25.05■■□□□ 1.6
CD55-209ENST00000488171 TAF1DQ9H5J8 278 aaPredicted RBP25.04■■□□□ 1.6
CD55-209ENST00000488171 PHAXQ9H814 394 aaKnown RBP25.04■■□□□ 1.6
CD55-209ENST00000488171 JDP2Q8WYK2 163 aa25.03■■□□□ 1.6
CD55-209ENST00000488171 KLRG1Q96E93 195 aa25.03■■□□□ 1.6
CD55-209ENST00000488171 CCDC27Q2M243 656 aa25.02■■□□□ 1.6
CD55-209ENST00000488171 CHADLQ6NUI6 762 aa25.02■■□□□ 1.6
CD55-209ENST00000488171 BBOX1O75936 387 aa25.01■■□□□ 1.59
CD55-209ENST00000488171 TRIM28Q13263 835 aaKnown RBP25.01■■□□□ 1.59
CD55-209ENST00000488171 GPC2Q8N158 579 aa25.01■■□□□ 1.59
CD55-209ENST00000488171 FAM89AQ96GI7 184 aa25.01■■□□□ 1.59
CD55-209ENST00000488171 TAF1P21675 1872 aa25.01■■□□□ 1.59
CD55-209ENST00000488171 DDX46Q7L014 1031 aaKnown RBP25■■□□□ 1.59
CD55-209ENST00000488171 WWC1Q8IX03 1113 aa25■■□□□ 1.59
CD55-209ENST00000488171 LARGE2Q8N3Y3 721 aa25■■□□□ 1.59
CD55-209ENST00000488171 TSPYL6Q8N831 410 aa25■■□□□ 1.59
CD55-209ENST00000488171 MRS2Q9HD23 443 aa25■■□□□ 1.59
CD55-209ENST00000488171 ANP32CO43423 234 aa24.99■■□□□ 1.59
CD55-209ENST00000488171 GOLGA2Q08379 1002 aa24.99■■□□□ 1.59
CD55-209ENST00000488171 GRAPQ13588 217 aa24.99■■□□□ 1.59
CD55-209ENST00000488171 RIC3Q7Z5B4 369 aa24.99■■□□□ 1.59
CD55-209ENST00000488171 SP8Q8IXZ3 490 aa24.99■■□□□ 1.59
CD55-209ENST00000488171 GRAPLQ8TC17 118 aaPredicted RBP24.99■■□□□ 1.59
CD55-209ENST00000488171 TSR2Q969E8 191 aaKnown RBP24.99■■□□□ 1.59
CD55-209ENST00000488171 TMX4Q9H1E5 349 aaPredicted RBP24.99■■□□□ 1.59
CD55-209ENST00000488171 HACL1Q9UJ83 578 aa24.99■■□□□ 1.59
CD55-209ENST00000488171 LDHDQ86WU2 507 aa24.98■■□□□ 1.59
CD55-209ENST00000488171 RTFDC1Q9BY42 306 aaPredicted RBP24.98■■□□□ 1.59
CD55-209ENST00000488171 ADAMTSL1Q8N6G6 1762 aa24.98■■□□□ 1.59
CD55-209ENST00000488171 EIF6P56537 245 aaKnown RBP24.97■■□□□ 1.59
CD55-209ENST00000488171 CCDC30Q5VVM6 783 aa24.97■■□□□ 1.59
CD55-209ENST00000488171 PPIP5K2O43314 1243 aa24.96■■□□□ 1.59
CD55-209ENST00000488171 EPHX2P34913 555 aa24.96■■□□□ 1.59
CD55-209ENST00000488171 SF3B3Q15393 1217 aaKnown RBP24.96■■□□□ 1.59
CD55-209ENST00000488171 AOC3Q16853 763 aa24.96■■□□□ 1.59
CD55-209ENST00000488171 RTL5Q5HYW3 569 aaPredicted RBP24.96■■□□□ 1.59
CD55-209ENST00000488171 JMYQ8N9B5 988 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms