RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 KCNH4Q9UQ05 1017 aa9.48□□□□□ -0.89
SMC4-219ENST00000487747 BCS1LQ9Y276 419 aa9.48□□□□□ -0.89
SMC4-219ENST00000487747 FAM196BA6NMK8 535 aa9.47□□□□□ -0.89
SMC4-219ENST00000487747 ADARB2-AS1A8MUL3 147 aa9.47□□□□□ -0.89
SMC4-219ENST00000487747 CDCA8Q53HL2 280 aa9.47□□□□□ -0.89
SMC4-219ENST00000487747 BTLAQ7Z6A9 289 aa9.47□□□□□ -0.89
SMC4-219ENST00000487747 ALYREFQ86V81 257 aaKnown RBP9.47□□□□□ -0.89
SMC4-219ENST00000487747 TNFRSF25Q93038 417 aa9.47□□□□□ -0.89
SMC4-219ENST00000487747 COL9A3Q14050 684 aaPredicted RBP9.46□□□□□ -0.9
SMC4-219ENST00000487747 ADAM23O75077 832 aa9.45□□□□□ -0.9
SMC4-219ENST00000487747 ALAS2P22557 587 aa9.45□□□□□ -0.9
SMC4-219ENST00000487747 BAG6P46379 1132 aa9.45□□□□□ -0.9
SMC4-219ENST00000487747 M0R082 166 aa9.44□□□□□ -0.9
SMC4-219ENST00000487747 PIK3R2O00459 728 aa9.44□□□□□ -0.9
SMC4-219ENST00000487747 ALBP02768 609 aa9.44□□□□□ -0.9
SMC4-219ENST00000487747 IGFBP4P22692 258 aa9.44□□□□□ -0.9
SMC4-219ENST00000487747 GRNP28799 593 aaKnown RBP9.44□□□□□ -0.9
SMC4-219ENST00000487747 ADH7P40394 386 aa9.44□□□□□ -0.9
SMC4-219ENST00000487747 ZNF417Q8TAU3 575 aa9.44□□□□□ -0.9
SMC4-219ENST00000487747 BHMTQ93088 406 aa9.44□□□□□ -0.9
SMC4-219ENST00000487747 ZNF587Q96SQ5 575 aaPredicted RBP9.44□□□□□ -0.9
SMC4-219ENST00000487747 NOP53Q9NZM5 478 aaKnown RBP9.44□□□□□ -0.9
SMC4-219ENST00000487747 DMGDHQ9UI17 866 aaKnown RBP9.44□□□□□ -0.9
SMC4-219ENST00000487747 RTN1Q16799 776 aa9.43□□□□□ -0.9
SMC4-219ENST00000487747 KLK14Q9P0G3 267 aa9.43□□□□□ -0.9
SMC4-219ENST00000487747 FURINP09958 794 aa9.42□□□□□ -0.9
SMC4-219ENST00000487747 MICALL1Q8N3F8 863 aa9.42□□□□□ -0.9
SMC4-219ENST00000487747 RFX1P22670 979 aa9.41□□□□□ -0.9
SMC4-219ENST00000487747 WEE1P30291 646 aa9.41□□□□□ -0.9
SMC4-219ENST00000487747 GSX2Q9BZM3 304 aa9.41□□□□□ -0.9
SMC4-219ENST00000487747 IGFLR1Q9H665 355 aa9.41□□□□□ -0.9
SMC4-219ENST00000487747 FAM229AH3BQW9 127 aa9.4□□□□□ -0.9
SMC4-219ENST00000487747 TGFBR3LH3BV60 316 aa9.4□□□□□ -0.9
SMC4-219ENST00000487747 TBC1D8BQ0IIM8 1120 aa9.4□□□□□ -0.9
SMC4-219ENST00000487747 C20orf204Q6ZNR8 217 aa9.4□□□□□ -0.9
SMC4-219ENST00000487747 QTRT2Q9H974 415 aaKnown RBP9.4□□□□□ -0.9
SMC4-219ENST00000487747 NEUROD1Q13562 356 aa9.39□□□□□ -0.91
SMC4-219ENST00000487747 IER5Q5VY09 327 aa9.39□□□□□ -0.91
SMC4-219ENST00000487747 DGKZQ13574 1117 aa9.38□□□□□ -0.91
SMC4-219ENST00000487747 FAM200AQ8TCP9 573 aa9.38□□□□□ -0.91
SMC4-219ENST00000487747 KRTAP4-8Q9BYQ9 185 aa9.38□□□□□ -0.91
SMC4-219ENST00000487747 K7ELQ4 463 aaPredicted RBP9.37□□□□□ -0.91
SMC4-219ENST00000487747 SPATA31C1P0DKV0 1188 aa9.37□□□□□ -0.91
SMC4-219ENST00000487747 NID1P14543 1247 aa9.37□□□□□ -0.91
SMC4-219ENST00000487747 INPP5BP32019 993 aa9.37□□□□□ -0.91
SMC4-219ENST00000487747 HIF1AQ16665 826 aa9.37□□□□□ -0.91
SMC4-219ENST00000487747 UBE2OQ9C0C9 1292 aaKnown RBP9.37□□□□□ -0.91
SMC4-219ENST00000487747 PRDM6Q9NQX0 595 aa9.37□□□□□ -0.91
SMC4-219ENST00000487747 IDH3AP50213 366 aa9.36□□□□□ -0.91
SMC4-219ENST00000487747 NAGPAQ9UK23 515 aa9.36□□□□□ -0.91
SMC4-219ENST00000487747 LRFN2Q9ULH4 789 aa9.36□□□□□ -0.91
SMC4-219ENST00000487747 SLC6A14Q9UN76 642 aa9.36□□□□□ -0.91
SMC4-219ENST00000487747 NOVA2Q9UNW9 492 aaKnown RBP9.36□□□□□ -0.91
SMC4-219ENST00000487747 NFKB1P19838 968 aa9.35□□□□□ -0.91
SMC4-219ENST00000487747 CCINQ13939 588 aa9.35□□□□□ -0.91
SMC4-219ENST00000487747 DOC2BQ14184 412 aa9.35□□□□□ -0.91
SMC4-219ENST00000487747 PRIMPOLQ96LW4 560 aa9.35□□□□□ -0.91
SMC4-219ENST00000487747 DNAJB12Q9NXW2 375 aaKnown RBP9.35□□□□□ -0.91
SMC4-219ENST00000487747 ZMIZ1Q9ULJ6 1067 aa9.35□□□□□ -0.91
SMC4-219ENST00000487747 USP20Q9Y2K6 914 aa9.35□□□□□ -0.91
SMC4-219ENST00000487747 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.35□□□□□ -0.91
SMC4-219ENST00000487747 FOXO3O43524 673 aa9.34□□□□□ -0.91
SMC4-219ENST00000487747 FKBP5Q13451 457 aaPredicted RBP9.34□□□□□ -0.91
SMC4-219ENST00000487747 NUDT8Q8WV74 236 aa9.34□□□□□ -0.91
SMC4-219ENST00000487747 ZFATQ9P243 1243 aa9.34□□□□□ -0.91
SMC4-219ENST00000487747 GRIK4Q16099 956 aa9.33□□□□□ -0.92
SMC4-219ENST00000487747 KRT25Q7Z3Z0 450 aa9.33□□□□□ -0.92
SMC4-219ENST00000487747 OPLAHO14841 1288 aa9.32□□□□□ -0.92
SMC4-219ENST00000487747 MICAL2O94851 1124 aa9.32□□□□□ -0.92
SMC4-219ENST00000487747 ITGB7P26010 798 aa9.32□□□□□ -0.92
SMC4-219ENST00000487747 TARSP26639 723 aaKnown RBP9.32□□□□□ -0.92
SMC4-219ENST00000487747 SRPK2P78362 688 aaKnown RBP9.32□□□□□ -0.92
SMC4-219ENST00000487747 FAM69CQ0P6D2 419 aa9.32□□□□□ -0.92
SMC4-219ENST00000487747 STK32AQ8WU08 396 aa9.32□□□□□ -0.92
SMC4-219ENST00000487747 MYO19Q96H55 970 aa9.32□□□□□ -0.92
SMC4-219ENST00000487747 PNMA5Q96PV4 448 aa9.32□□□□□ -0.92
SMC4-219ENST00000487747 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.31□□□□□ -0.92
SMC4-219ENST00000487747 ZBTB42B2RXF5 422 aa9.31□□□□□ -0.92
SMC4-219ENST00000487747 PRMT3O60678 531 aa9.31□□□□□ -0.92
SMC4-219ENST00000487747 LILRB5O75023 590 aa9.31□□□□□ -0.92
SMC4-219ENST00000487747 GATA4P43694 442 aa9.31□□□□□ -0.92
SMC4-219ENST00000487747 C11orf91Q3C1V1 193 aa9.31□□□□□ -0.92
SMC4-219ENST00000487747 PRRT3Q5FWE3 981 aa9.31□□□□□ -0.92
SMC4-219ENST00000487747 PSAPL1Q6NUJ1 521 aa9.31□□□□□ -0.92
SMC4-219ENST00000487747 IFT43Q96FT9 208 aa9.31□□□□□ -0.92
SMC4-219ENST00000487747 JPH1Q9HDC5 661 aaPredicted RBP9.31□□□□□ -0.92
SMC4-219ENST00000487747 SASH3O75995 380 aa9.3□□□□□ -0.92
SMC4-219ENST00000487747 PLAURQ03405 335 aa9.3□□□□□ -0.92
SMC4-219ENST00000487747 TRIM28Q13263 835 aaKnown RBP9.3□□□□□ -0.92
SMC4-219ENST00000487747 OCLNQ16625 522 aa9.3□□□□□ -0.92
SMC4-219ENST00000487747 COX20Q5RI15 118 aa9.3□□□□□ -0.92
SMC4-219ENST00000487747 TRAPPC3LQ5T215 181 aa9.3□□□□□ -0.92
SMC4-219ENST00000487747 CAPN12Q6ZSI9 719 aa9.3□□□□□ -0.92
SMC4-219ENST00000487747 VTI1AQ96AJ9 217 aa9.3□□□□□ -0.92
SMC4-219ENST00000487747 SPDYE3A6NKU9 549 aa9.29□□□□□ -0.92
SMC4-219ENST00000487747 ARSDP51689 593 aa9.29□□□□□ -0.92
SMC4-219ENST00000487747 AFF1P51825 1210 aaKnown RBP9.29□□□□□ -0.92
SMC4-219ENST00000487747 SAP130Q9H0E3 1048 aa9.29□□□□□ -0.92
SMC4-219ENST00000487747 EFCC1Q9HA90 598 aa9.29□□□□□ -0.92
SMC4-219ENST00000487747 EPB42P16452 691 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms