RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 PIK3R5Q8WYR1 880 aa10.5□□□□□ -0.73
RTN4-214ENST00000486085 NXF1Q9UBU9 619 aaKnown RBP10.5□□□□□ -0.73
RTN4-214ENST00000486085 BNIP3LO60238 219 aa10.49□□□□□ -0.73
RTN4-214ENST00000486085 PDGFAP04085 211 aa10.49□□□□□ -0.73
RTN4-214ENST00000486085 SV2AQ7L0J3 742 aa10.49□□□□□ -0.73
RTN4-214ENST00000486085 TMC1Q8TDI8 760 aa10.49□□□□□ -0.73
RTN4-214ENST00000486085 NUDT16Q96DE0 195 aaKnown RBP10.49□□□□□ -0.73
RTN4-214ENST00000486085 RTCBQ9Y3I0 505 aaKnown RBP10.49□□□□□ -0.73
RTN4-214ENST00000486085 GPR25O00155 361 aa10.48□□□□□ -0.73
RTN4-214ENST00000486085 FAM157BP0CG42 384 aa10.48□□□□□ -0.73
RTN4-214ENST00000486085 TNP2Q05952 138 aa10.48□□□□□ -0.73
RTN4-214ENST00000486085 SFSWAPQ12872 951 aaKnown RBP10.48□□□□□ -0.73
RTN4-214ENST00000486085 FOXR1Q6PIV2 292 aa10.48□□□□□ -0.73
RTN4-214ENST00000486085 ABHD17AQ96GS6 310 aa10.48□□□□□ -0.73
RTN4-214ENST00000486085 MAPTP10636 758 aaKnown RBP10.47□□□□□ -0.73
RTN4-214ENST00000486085 EPB42P16452 691 aa10.47□□□□□ -0.73
RTN4-214ENST00000486085 PCSK2P16519 638 aa10.47□□□□□ -0.73
RTN4-214ENST00000486085 C8orf34Q49A92 452 aa10.47□□□□□ -0.73
RTN4-214ENST00000486085 GRNP28799 593 aaKnown RBP10.46□□□□□ -0.73
RTN4-214ENST00000486085 TTC16Q8NEE8 873 aa10.46□□□□□ -0.73
RTN4-214ENST00000486085 TRERF1Q96PN7 1200 aa10.46□□□□□ -0.73
RTN4-214ENST00000486085 STRN4Q9NRL3 753 aa10.46□□□□□ -0.73
RTN4-214ENST00000486085 NDFIP2Q9NV92 336 aa10.46□□□□□ -0.73
RTN4-214ENST00000486085 KCNH4Q9UQ05 1017 aa10.46□□□□□ -0.73
RTN4-214ENST00000486085 EFSO43281 561 aa10.45□□□□□ -0.74
RTN4-214ENST00000486085 ZSCAN29Q8IWY8 852 aaPredicted RBP10.45□□□□□ -0.74
RTN4-214ENST00000486085 NANOS1Q8WY41 292 aaKnown RBP10.45□□□□□ -0.74
RTN4-214ENST00000486085 RBCK1Q9BYM8 510 aa10.45□□□□□ -0.74
RTN4-214ENST00000486085 GGNBP2Q9H3C7 697 aa10.45□□□□□ -0.74
RTN4-214ENST00000486085 KCNMB2Q9Y691 235 aa10.45□□□□□ -0.74
RTN4-214ENST00000486085 A6NHS1 94 aa10.44□□□□□ -0.74
RTN4-214ENST00000486085 USP5P45974 858 aa10.44□□□□□ -0.74
RTN4-214ENST00000486085 DNAJC14Q6Y2X3 702 aaPredicted RBP10.44□□□□□ -0.74
RTN4-214ENST00000486085 ASB16Q96NS5 453 aa10.44□□□□□ -0.74
RTN4-214ENST00000486085 CITED4Q96RK1 184 aa10.44□□□□□ -0.74
RTN4-214ENST00000486085 CFHR5Q9BXR6 569 aa10.44□□□□□ -0.74
RTN4-214ENST00000486085 MARK1Q9P0L2 795 aa10.44□□□□□ -0.74
RTN4-214ENST00000486085 HCN2Q9UL51 889 aa10.44□□□□□ -0.74
RTN4-214ENST00000486085 ATXN7L1Q9ULK2 861 aaPredicted RBP10.44□□□□□ -0.74
RTN4-214ENST00000486085 PHF24Q9UPV7 400 aa10.44□□□□□ -0.74
RTN4-214ENST00000486085 ANKRD33BA6NCL7 494 aa10.43□□□□□ -0.74
RTN4-214ENST00000486085 UBAP1LF5GYI3 381 aa10.43□□□□□ -0.74
RTN4-214ENST00000486085 CD33P20138 364 aa10.43□□□□□ -0.74
RTN4-214ENST00000486085 LAMC2Q13753 1193 aa10.43□□□□□ -0.74
RTN4-214ENST00000486085 GRIN2CQ14957 1233 aa10.43□□□□□ -0.74
RTN4-214ENST00000486085 TMC7Q7Z402 723 aa10.43□□□□□ -0.74
RTN4-214ENST00000486085 GJD3Q8N144 294 aa10.43□□□□□ -0.74
RTN4-214ENST00000486085 FNDC3AQ9Y2H6 1198 aaKnown RBP10.43□□□□□ -0.74
RTN4-214ENST00000486085 XYLBO75191 536 aa10.42□□□□□ -0.74
RTN4-214ENST00000486085 RPLP1P05386 114 aaKnown RBP10.42□□□□□ -0.74
RTN4-214ENST00000486085 FGFR3P22607 806 aa10.42□□□□□ -0.74
RTN4-214ENST00000486085 KCNQ4P56696 695 aa10.42□□□□□ -0.74
RTN4-214ENST00000486085 TRIP4Q15650 581 aaPredicted RBP10.42□□□□□ -0.74
RTN4-214ENST00000486085 H3BM21 787 aa10.41□□□□□ -0.74
RTN4-214ENST00000486085 PDE3BQ13370 1112 aa10.41□□□□□ -0.74
RTN4-214ENST00000486085 NPAS3Q8IXF0 933 aa10.41□□□□□ -0.74
RTN4-214ENST00000486085 GPR161Q8N6U8 529 aaKnown RBP10.41□□□□□ -0.74
RTN4-214ENST00000486085 TERTO14746 1132 aaKnown RBP10.4□□□□□ -0.74
RTN4-214ENST00000486085 CTBSQ01459 385 aa10.4□□□□□ -0.74
RTN4-214ENST00000486085 KRT25Q7Z3Z0 450 aa10.4□□□□□ -0.74
RTN4-214ENST00000486085 RGS22Q8NE09 1264 aa10.4□□□□□ -0.74
RTN4-214ENST00000486085 FAM129BQ96TA1 746 aa10.4□□□□□ -0.74
RTN4-214ENST00000486085 SASH3O75995 380 aa10.39□□□□□ -0.75
RTN4-214ENST00000486085 EHHADHQ08426 723 aa10.39□□□□□ -0.75
RTN4-214ENST00000486085 CCINQ13939 588 aa10.39□□□□□ -0.75
RTN4-214ENST00000486085 SLC30A3Q99726 388 aa10.39□□□□□ -0.75
RTN4-214ENST00000486085 GSX2Q9BZM3 304 aa10.39□□□□□ -0.75
RTN4-214ENST00000486085 NIF3L1Q9GZT8 377 aa10.39□□□□□ -0.75
RTN4-214ENST00000486085 GPR182O15218 404 aa10.38□□□□□ -0.75
RTN4-214ENST00000486085 SPEM2Q0P670 501 aa10.38□□□□□ -0.75
RTN4-214ENST00000486085 ZNF438Q7Z4V0 828 aa10.38□□□□□ -0.75
RTN4-214ENST00000486085 SLC16A10Q8TF71 515 aa10.38□□□□□ -0.75
RTN4-214ENST00000486085 DMRTB1Q96MA1 342 aa10.38□□□□□ -0.75
RTN4-214ENST00000486085 EGFRP00533 1210 aa10.37□□□□□ -0.75
RTN4-214ENST00000486085 ERCC3P19447 782 aa10.37□□□□□ -0.75
RTN4-214ENST00000486085 TARSP26639 723 aaKnown RBP10.37□□□□□ -0.75
RTN4-214ENST00000486085 PLCB3Q01970 1234 aa10.37□□□□□ -0.75
RTN4-214ENST00000486085 RAB44Q7Z6P3 723 aaPredicted RBP10.37□□□□□ -0.75
RTN4-214ENST00000486085 FOXD4L4Q8WXT5 416 aaPredicted RBP10.37□□□□□ -0.75
RTN4-214ENST00000486085 PNMA5Q96PV4 448 aa10.37□□□□□ -0.75
RTN4-214ENST00000486085 C11orf16Q9NQ32 467 aa10.37□□□□□ -0.75
RTN4-214ENST00000486085 IGHA2P01877 340 aa10.36□□□□□ -0.75
RTN4-214ENST00000486085 BHMTQ93088 406 aa10.36□□□□□ -0.75
RTN4-214ENST00000486085 ELP3Q9H9T3 547 aa10.36□□□□□ -0.75
RTN4-214ENST00000486085 TREHO43280 583 aa10.35□□□□□ -0.75
RTN4-214ENST00000486085 BMP4P12644 408 aa10.35□□□□□ -0.75
RTN4-214ENST00000486085 MX2P20592 715 aa10.35□□□□□ -0.75
RTN4-214ENST00000486085 GAS6Q14393 721 aa10.35□□□□□ -0.75
RTN4-214ENST00000486085 FAM182BQ5T319 152 aa10.35□□□□□ -0.75
RTN4-214ENST00000486085 PDE12Q6L8Q7 609 aaKnown RBP10.35□□□□□ -0.75
RTN4-214ENST00000486085 XKR5Q6UX68 686 aa10.35□□□□□ -0.75
RTN4-214ENST00000486085 NLRP13Q86W25 1043 aa10.35□□□□□ -0.75
RTN4-214ENST00000486085 NPAS4Q8IUM7 802 aa10.35□□□□□ -0.75
RTN4-214ENST00000486085 TMEM63CQ9P1W3 806 aa10.35□□□□□ -0.75
RTN4-214ENST00000486085 PRR12Q9ULL5 1215 aa10.35□□□□□ -0.75
RTN4-214ENST00000486085 ERBB4Q15303 1308 aa10.34□□□□□ -0.75
RTN4-214ENST00000486085 C2CD2LO14523 706 aa10.34□□□□□ -0.75
RTN4-214ENST00000486085 NFKB1P19838 968 aa10.34□□□□□ -0.75
RTN4-214ENST00000486085 COL25A1Q9BXS0 654 aaPredicted RBP10.34□□□□□ -0.75
RTN4-214ENST00000486085 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms