RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 NECTIN2Q92692 538 aa17.93■□□□□ 0.46
SCAF4-206ENST00000485790 TAF1DQ9H5J8 278 aaPredicted RBP17.93■□□□□ 0.46
SCAF4-206ENST00000485790 DDX21Q9NR30 783 aaKnown RBP eCLIP17.93■□□□□ 0.46
SCAF4-206ENST00000485790 FZD9O00144 591 aa17.92■□□□□ 0.46
SCAF4-206ENST00000485790 TCERG1O14776 1098 aaKnown RBP17.92■□□□□ 0.46
SCAF4-206ENST00000485790 BBOX1O75936 387 aa17.92■□□□□ 0.46
SCAF4-206ENST00000485790 NTSR2O95665 410 aa17.92■□□□□ 0.46
SCAF4-206ENST00000485790 GPC2Q8N158 579 aa17.92■□□□□ 0.46
SCAF4-206ENST00000485790 XAGE3Q8WTP9 111 aa17.92■□□□□ 0.46
SCAF4-206ENST00000485790 RNF123Q5XPI4 1314 aa17.92■□□□□ 0.46
SCAF4-206ENST00000485790 UBN2Q6ZU65 1347 aa17.92■□□□□ 0.46
SCAF4-206ENST00000485790 PPEF1O14829 653 aaPredicted RBP17.91■□□□□ 0.46
SCAF4-206ENST00000485790 TCIRG1Q13488 830 aa17.91■□□□□ 0.46
SCAF4-206ENST00000485790 EAPPQ56P03 285 aaPredicted RBP17.91■□□□□ 0.46
SCAF4-206ENST00000485790 LARGE2Q8N3Y3 721 aa17.91■□□□□ 0.46
SCAF4-206ENST00000485790 VPS33BQ9H267 617 aa17.91■□□□□ 0.46
SCAF4-206ENST00000485790 CREBZFQ9NS37 354 aa17.91■□□□□ 0.46
SCAF4-206ENST00000485790 TRMT112Q9UI30 125 aaKnown RBP17.91■□□□□ 0.46
SCAF4-206ENST00000485790 SBF1O95248 1867 aa17.9■□□□□ 0.46
SCAF4-206ENST00000485790 ANXA1P04083 346 aa17.9■□□□□ 0.46
SCAF4-206ENST00000485790 HOXB7P09629 217 aa17.9■□□□□ 0.46
SCAF4-206ENST00000485790 EPHX2P34913 555 aa17.9■□□□□ 0.46
SCAF4-206ENST00000485790 CALD1Q05682 793 aaKnown RBP17.9■□□□□ 0.46
SCAF4-206ENST00000485790 PROSER3Q2NL68 480 aa17.9■□□□□ 0.46
SCAF4-206ENST00000485790 LRP10Q7Z4F1 713 aa17.9■□□□□ 0.46
SCAF4-206ENST00000485790 SUPT20HQ8NEM7 779 aa17.9■□□□□ 0.46
SCAF4-206ENST00000485790 CHMP4AQ9BY43 222 aa17.9■□□□□ 0.46
SCAF4-206ENST00000485790 DBF4Q9UBU7 674 aaPredicted RBP17.9■□□□□ 0.46
SCAF4-206ENST00000485790 TRIM35Q9UPQ4 493 aa17.9■□□□□ 0.46
SCAF4-206ENST00000485790 GJA3Q9Y6H8 435 aa17.9■□□□□ 0.46
SCAF4-206ENST00000485790 DLEC1Q9Y238 1755 aa17.89■□□□□ 0.45
SCAF4-206ENST00000485790 LMOD1P29536 600 aaPredicted RBP17.89■□□□□ 0.45
SCAF4-206ENST00000485790 HDGFL1Q5TGJ6 251 aa17.89■□□□□ 0.45
SCAF4-206ENST00000485790 ANKRD13DQ6ZTN6 518 aa17.89■□□□□ 0.45
SCAF4-206ENST00000485790 DDX46Q7L014 1031 aaKnown RBP17.89■□□□□ 0.45
SCAF4-206ENST00000485790 CFAP44Q96MT7 982 aa17.89■□□□□ 0.45
SCAF4-206ENST00000485790 ATP6V0A2Q9Y487 856 aa17.89■□□□□ 0.45
SCAF4-206ENST00000485790 TNRC6CQ9HCJ0 1690 aaKnown RBP17.89■□□□□ 0.45
SCAF4-206ENST00000485790 NLRP10Q86W26 655 aa17.88■□□□□ 0.45
SCAF4-206ENST00000485790 HYPKQ9NX55 129 aa17.88■□□□□ 0.45
SCAF4-206ENST00000485790 ABCC12Q96J65 1359 aa17.88■□□□□ 0.45
SCAF4-206ENST00000485790 ANKRD31Q8N7Z5 1873 aa17.88■□□□□ 0.45
SCAF4-206ENST00000485790 SLX4Q8IY92 1834 aa17.87■□□□□ 0.45
SCAF4-206ENST00000485790 POTEIP0CG38 1075 aa17.87■□□□□ 0.45
SCAF4-206ENST00000485790 POTEJP0CG39 1038 aa17.87■□□□□ 0.45
SCAF4-206ENST00000485790 SP8Q8IXZ3 490 aa17.87■□□□□ 0.45
SCAF4-206ENST00000485790 NIM1KQ8IY84 436 aa17.87■□□□□ 0.45
SCAF4-206ENST00000485790 PLBD2Q8NHP8 589 aa17.87■□□□□ 0.45
SCAF4-206ENST00000485790 PRKRIP1Q9H875 184 aaPredicted RBP17.87■□□□□ 0.45
SCAF4-206ENST00000485790 SH3TC1Q8TE82 1336 aa17.87■□□□□ 0.45
SCAF4-206ENST00000485790 ZNF541Q9H0D2 1346 aa17.87■□□□□ 0.45
SCAF4-206ENST00000485790 RIC1Q4ADV7 1423 aa17.87■□□□□ 0.45
SCAF4-206ENST00000485790 HCLS1P14317 486 aaPredicted RBP17.86■□□□□ 0.45
SCAF4-206ENST00000485790 CHPF2Q9P2E5 772 aa17.86■□□□□ 0.45
SCAF4-206ENST00000485790 TMEM88BA6NKF7 163 aa17.85■□□□□ 0.45
SCAF4-206ENST00000485790 PPIP5K2O43314 1243 aa17.85■□□□□ 0.45
SCAF4-206ENST00000485790 HSP90B1P14625 803 aaKnown RBP17.85■□□□□ 0.45
SCAF4-206ENST00000485790 DPP8Q6V1X1 898 aaPredicted RBP17.85■□□□□ 0.45
SCAF4-206ENST00000485790 C3orf67Q6ZVT6 689 aa17.85■□□□□ 0.45
SCAF4-206ENST00000485790 TMC4Q7Z404 712 aa17.85■□□□□ 0.45
SCAF4-206ENST00000485790 CNTROBQ8N137 903 aa17.85■□□□□ 0.45
SCAF4-206ENST00000485790 MPNDQ8N594 471 aa17.85■□□□□ 0.45
SCAF4-206ENST00000485790 BCORQ6W2J9 1755 aa17.84■□□□□ 0.45
SCAF4-206ENST00000485790 WDR90Q96KV7 1748 aa17.84■□□□□ 0.45
SCAF4-206ENST00000485790 ITGBL1O95965 494 aaPredicted RBP17.84■□□□□ 0.45
SCAF4-206ENST00000485790 GNAI1P63096 354 aa17.84■□□□□ 0.45
SCAF4-206ENST00000485790 KRT24Q2M2I5 525 aa17.84■□□□□ 0.45
SCAF4-206ENST00000485790 DUSP27Q5VZP5 1158 aa17.84■□□□□ 0.45
SCAF4-206ENST00000485790 MKRN1Q9UHC7 482 aaKnown RBP17.83■□□□□ 0.44
SCAF4-206ENST00000485790 ZNRF3Q9ULT6 936 aa17.83■□□□□ 0.44
SCAF4-206ENST00000485790 COL11A2P13942 1736 aaPredicted RBP17.82■□□□□ 0.44
SCAF4-206ENST00000485790 APAF1O14727 1248 aa17.82■□□□□ 0.44
SCAF4-206ENST00000485790 GRAPQ13588 217 aa17.82■□□□□ 0.44
SCAF4-206ENST00000485790 RIC3Q7Z5B4 369 aa17.82■□□□□ 0.44
SCAF4-206ENST00000485790 GRAPLQ8TC17 118 aaPredicted RBP17.82■□□□□ 0.44
SCAF4-206ENST00000485790 RTFDC1Q9BY42 306 aaPredicted RBP17.82■□□□□ 0.44
SCAF4-206ENST00000485790 IFT57Q9NWB7 429 aa17.82■□□□□ 0.44
SCAF4-206ENST00000485790 FER1L6Q2WGJ9 1857 aa17.82■□□□□ 0.44
SCAF4-206ENST00000485790 ABCC4O15439 1325 aa17.81■□□□□ 0.44
SCAF4-206ENST00000485790 PASKQ96RG2 1323 aa17.81■□□□□ 0.44
SCAF4-206ENST00000485790 TRIM28Q13263 835 aaKnown RBP17.81■□□□□ 0.44
SCAF4-206ENST00000485790 TNIP1Q15025 636 aa17.81■□□□□ 0.44
SCAF4-206ENST00000485790 AOC3Q16853 763 aa17.81■□□□□ 0.44
SCAF4-206ENST00000485790 COL13A1Q5TAT6 717 aaPredicted RBP17.81■□□□□ 0.44
SCAF4-206ENST00000485790 MAP1SQ66K74 1059 aaPredicted RBP17.81■□□□□ 0.44
SCAF4-206ENST00000485790 USP50Q70EL3 339 aaPredicted RBP17.81■□□□□ 0.44
SCAF4-206ENST00000485790 MBIPQ9NS73 344 aa17.81■□□□□ 0.44
SCAF4-206ENST00000485790 HSPA1AP0DMV8 641 aaKnown RBP17.8■□□□□ 0.44
SCAF4-206ENST00000485790 HSPA1BP0DMV9 641 aaKnown RBP17.8■□□□□ 0.44
SCAF4-206ENST00000485790 GOLGA2Q08379 1002 aa17.8■□□□□ 0.44
SCAF4-206ENST00000485790 FAM89AQ96GI7 184 aa17.8■□□□□ 0.44
SCAF4-206ENST00000485790 ISCA1Q9BUE6 129 aa17.8■□□□□ 0.44
SCAF4-206ENST00000485790 KDM3BQ7LBC6 1761 aa17.79■□□□□ 0.44
SCAF4-206ENST00000485790 ATP5J2-PTCD1G3V325 749 aa17.79■□□□□ 0.44
SCAF4-206ENST00000485790 ZNF853P0CG23 659 aa17.79■□□□□ 0.44
SCAF4-206ENST00000485790 EPS15P42566 896 aa17.79■□□□□ 0.44
SCAF4-206ENST00000485790 DEFB115Q30KQ5 88 aa17.79■□□□□ 0.44
SCAF4-206ENST00000485790 ELL2O00472 640 aaPredicted RBP17.78■□□□□ 0.44
SCAF4-206ENST00000485790 CXCL9Q07325 125 aa17.78■□□□□ 0.44
SCAF4-206ENST00000485790 SF3B3Q15393 1217 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms