RNA–Protein interactions for RNA: ENST00000485120.1

PKD1-218, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 696 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-218ENST00000485120 ZBTB38Q8NAP3 1195 aaPredicted RBP25.81■■□□□ 1.72
PKD1-218ENST00000485120 TRMT112Q9UI30 125 aaKnown RBP25.81■■□□□ 1.72
PKD1-218ENST00000485120 NTSR2O95665 410 aa25.8■■□□□ 1.72
PKD1-218ENST00000485120 GTF2E1P29083 439 aaPredicted RBP25.8■■□□□ 1.72
PKD1-218ENST00000485120 GCKRQ14397 625 aa25.8■■□□□ 1.72
PKD1-218ENST00000485120 DZIP1LQ8IYY4 767 aaKnown RBP25.8■■□□□ 1.72
PKD1-218ENST00000485120 NPHP1O15259 732 aa25.79■■□□□ 1.72
PKD1-218ENST00000485120 PCCAP05165 728 aaPredicted RBP25.79■■□□□ 1.72
PKD1-218ENST00000485120 ST5P78524 1137 aa25.79■■□□□ 1.72
PKD1-218ENST00000485120 PDE3AQ14432 1141 aa25.79■■□□□ 1.72
PKD1-218ENST00000485120 CWF19L2Q2TBE0 894 aaKnown RBP25.79■■□□□ 1.72
PKD1-218ENST00000485120 SLC10A5Q5PT55 438 aa25.79■■□□□ 1.72
PKD1-218ENST00000485120 FTSJ3Q8IY81 847 aaKnown RBP25.79■■□□□ 1.72
PKD1-218ENST00000485120 SH3TC1Q8TE82 1336 aa25.79■■□□□ 1.72
PKD1-218ENST00000485120 COL24A1Q17RW2 1714 aa25.78■■□□□ 1.72
PKD1-218ENST00000485120 PRR5LQ6MZQ0 368 aa25.78■■□□□ 1.72
PKD1-218ENST00000485120 PDZRN3Q9UPQ7 1066 aa25.78■■□□□ 1.72
PKD1-218ENST00000485120 H7C1W4 665 aa25.77■■□□□ 1.72
PKD1-218ENST00000485120 BRIP1Q9BX63 1249 aa25.77■■□□□ 1.72
PKD1-218ENST00000485120 CD2APQ9Y5K6 639 aa25.77■■□□□ 1.72
PKD1-218ENST00000485120 CENPBP07199 599 aaPredicted RBP25.76■■□□□ 1.71
PKD1-218ENST00000485120 NUP98P52948 1817 aa25.75■■□□□ 1.71
PKD1-218ENST00000485120 FAM177BA6PVY3 158 aa25.75■■□□□ 1.71
PKD1-218ENST00000485120 CLUAP1Q96AJ1 413 aa25.75■■□□□ 1.71
PKD1-218ENST00000485120 HDAC5Q9UQL6 1122 aa25.75■■□□□ 1.71
PKD1-218ENST00000485120 ARFGEF2Q9Y6D5 1785 aa25.74■■□□□ 1.71
PKD1-218ENST00000485120 GRM8O00222 908 aa25.74■■□□□ 1.71
PKD1-218ENST00000485120 RRP1P56182 461 aaKnown RBP25.74■■□□□ 1.71
PKD1-218ENST00000485120 C9orf78Q9NZ63 289 aaPredicted RBP25.74■■□□□ 1.71
PKD1-218ENST00000485120 UTYO14607 1347 aa25.73■■□□□ 1.71
PKD1-218ENST00000485120 CDHR2Q9BYE9 1310 aa25.73■■□□□ 1.71
PKD1-218ENST00000485120 PDE6BP35913 854 aa25.73■■□□□ 1.71
PKD1-218ENST00000485120 ERFEQ4G0M1 354 aa25.73■■□□□ 1.71
PKD1-218ENST00000485120 FAM89AQ96GI7 184 aa25.73■■□□□ 1.71
PKD1-218ENST00000485120 PPP1R1BQ9UD71 204 aaPredicted RBP25.73■■□□□ 1.71
PKD1-218ENST00000485120 RIC1Q4ADV7 1423 aa25.72■■□□□ 1.71
PKD1-218ENST00000485120 KLRG2A4D1S0 409 aaPredicted RBP25.72■■□□□ 1.71
PKD1-218ENST00000485120 PLIN1O60240 522 aa25.72■■□□□ 1.71
PKD1-218ENST00000485120 TGFB2P61812 414 aa25.72■■□□□ 1.71
PKD1-218ENST00000485120 NUTM1Q86Y26 1132 aa25.72■■□□□ 1.71
PKD1-218ENST00000485120 IRS4O14654 1257 aaPredicted RBP25.71■■□□□ 1.71
PKD1-218ENST00000485120 TMEM57Q8N5G2 664 aa25.71■■□□□ 1.71
PKD1-218ENST00000485120 NLRP3Q96P20 1036 aa25.71■■□□□ 1.71
PKD1-218ENST00000485120 USP44Q9H0E7 712 aa25.71■■□□□ 1.71
PKD1-218ENST00000485120 CHMP4BQ9H444 224 aaKnown RBP25.71■■□□□ 1.71
PKD1-218ENST00000485120 CASP7P55210 303 aa25.7■■□□□ 1.7
PKD1-218ENST00000485120 PLA2G12BQ9BX93 195 aa25.7■■□□□ 1.7
PKD1-218ENST00000485120 TNNQ9UQP3 1299 aa25.7■■□□□ 1.7
PKD1-218ENST00000485120 C10orf71Q711Q0 1435 aa25.7■■□□□ 1.7
PKD1-218ENST00000485120 RLBP1P12271 317 aa25.69■■□□□ 1.7
PKD1-218ENST00000485120 PDE8AO60658 829 aa25.68■■□□□ 1.7
PKD1-218ENST00000485120 GNAI3P08754 354 aa25.68■■□□□ 1.7
PKD1-218ENST00000485120 UBE3BQ7Z3V4 1068 aa25.68■■□□□ 1.7
PKD1-218ENST00000485120 PANK1Q8TE04 598 aa25.68■■□□□ 1.7
PKD1-218ENST00000485120 NRXN2Q9P2S2 1712 aa25.68■■□□□ 1.7
PKD1-218ENST00000485120 ANKRD36CQ5JPF3 1778 aa25.67■■□□□ 1.7
PKD1-218ENST00000485120 SUPT16HQ9Y5B9 1047 aaKnown RBP25.67■■□□□ 1.7
PKD1-218ENST00000485120 MVPQ14764 893 aaKnown RBP25.66■■□□□ 1.7
PKD1-218ENST00000485120 SF3B3Q15393 1217 aaKnown RBP25.66■■□□□ 1.7
PKD1-218ENST00000485120 ITPRIPQ8IWB1 547 aa25.66■■□□□ 1.7
PKD1-218ENST00000485120 SYNE4Q8N205 404 aa25.66■■□□□ 1.7
PKD1-218ENST00000485120 DDX19BQ9UMR2 479 aa25.66■■□□□ 1.7
PKD1-218ENST00000485120 H0YIN7 160 aa25.65■■□□□ 1.7
PKD1-218ENST00000485120 NBPF7P0C2Y1 421 aaPredicted RBP25.65■■□□□ 1.7
PKD1-218ENST00000485120 HCLS1P14317 486 aaPredicted RBP25.65■■□□□ 1.7
PKD1-218ENST00000485120 CRY2Q49AN0 593 aa25.65■■□□□ 1.7
PKD1-218ENST00000485120 RTL5Q5HYW3 569 aaPredicted RBP25.65■■□□□ 1.7
PKD1-218ENST00000485120 ABCC12Q96J65 1359 aa25.65■■□□□ 1.7
PKD1-218ENST00000485120 ZBTB7BO15156 539 aaPredicted RBP25.64■■□□□ 1.7
PKD1-218ENST00000485120 UBTFL1P0CB47 393 aaPredicted RBP25.64■■□□□ 1.7
PKD1-218ENST00000485120 CCDC24Q8N4L8 307 aa25.64■■□□□ 1.7
PKD1-218ENST00000485120 FHDC1Q9C0D6 1143 aaPredicted RBP25.64■■□□□ 1.7
PKD1-218ENST00000485120 LRP5O75197 1615 aa25.63■■□□□ 1.69
PKD1-218ENST00000485120 JARID2Q92833 1246 aaPredicted RBP25.63■■□□□ 1.69
PKD1-218ENST00000485120 SRGNP10124 158 aa25.62■■□□□ 1.69
PKD1-218ENST00000485120 C2CD5Q86YS7 1000 aa25.62■■□□□ 1.69
PKD1-218ENST00000485120 SYT17Q9BSW7 474 aa25.62■■□□□ 1.69
PKD1-218ENST00000485120 CSF1RP07333 972 aa25.61■■□□□ 1.69
PKD1-218ENST00000485120 NPR1P16066 1061 aa25.61■■□□□ 1.69
PKD1-218ENST00000485120 HOXA10P31260 410 aaPredicted RBP25.61■■□□□ 1.69
PKD1-218ENST00000485120 CCDC152Q4G0S7 254 aa25.61■■□□□ 1.69
PKD1-218ENST00000485120 C20orf194Q5TEA3 1177 aa25.61■■□□□ 1.69
PKD1-218ENST00000485120 MASTLQ96GX5 879 aa25.61■■□□□ 1.69
PKD1-218ENST00000485120 MEIS3Q99687 375 aa25.61■■□□□ 1.69
PKD1-218ENST00000485120 COG6Q9Y2V7 657 aa25.61■■□□□ 1.69
PKD1-218ENST00000485120 CTSWP56202 376 aa25.6■■□□□ 1.69
PKD1-218ENST00000485120 STYK1Q6J9G0 422 aa25.6■■□□□ 1.69
PKD1-218ENST00000485120 GNAI2P04899 355 aa25.59■■□□□ 1.69
PKD1-218ENST00000485120 ALDH1B1P30837 517 aa25.59■■□□□ 1.69
PKD1-218ENST00000485120 FOXO4P98177 505 aa25.59■■□□□ 1.69
PKD1-218ENST00000485120 KLHL34Q8N239 644 aa25.59■■□□□ 1.69
PKD1-218ENST00000485120 TTLL11Q8NHH1 800 aa25.59■■□□□ 1.69
PKD1-218ENST00000485120 RPGRQ92834 1020 aaKnown RBP25.59■■□□□ 1.69
PKD1-218ENST00000485120 RBM17Q96I25 401 aaKnown RBP25.59■■□□□ 1.69
PKD1-218ENST00000485120 SUCLG2Q96I99 432 aa25.59■■□□□ 1.69
PKD1-218ENST00000485120 DPEP1P16444 411 aa25.58■■□□□ 1.69
PKD1-218ENST00000485120 RABL6Q3YEC7 729 aaPredicted RBP25.58■■□□□ 1.69
PKD1-218ENST00000485120 CNKSR1Q969H4 720 aa25.58■■□□□ 1.69
PKD1-218ENST00000485120 CRAMP1Q96RY5 1269 aa25.58■■□□□ 1.69
PKD1-218ENST00000485120 AFDNP55196 1824 aaKnown RBP25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms